Clone RE04174 Report

Search the DGRC for RE04174

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:41
Well:74
Vector:pFlc-1
Associated Gene/Transcriptabd-A-RA
Protein status:RE04174.pep: gold
Sequenced Size:4872

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10325 2003-01-01 Sim4 clustering to Release 3
CG10325 2004-10-25 Blastp of sequenced clone
abd-A 2008-04-29 Release 5.5 accounting
abd-A 2008-08-15 Release 5.9 accounting
abd-A 2008-12-18 5.12 accounting

Clone Sequence Records

RE04174.complete Sequence

4872 bp (4872 high quality bases) assembled on 2005-08-22

GenBank Submission: BT016031

> RE04174.complete
ATAAACGTTTCGCTGCTCGTAACGCCACAACGCTCGACGTTTCGCAGCGG
CTTTGCTTTCGCTTCTCTTCTCGCGCGTAAAGCGGTCTCCCCAAAAAAAA
AAAAATAGAAAACAAAAAATATAAAGGAAAACCCCCTCCGTAGACAGACA
AAACTCAAAGTCTCCAACGACTCAAAGCGCCTCAGTCGTTGCCGCTCTGC
CGCCGTTTCTGTCGACGCCGCTGCCCGCGCTGGCAGCAAGAATTACCAAT
TACACGAAATTTTTATACTCTTTTAAAAATTTCGTTTTATTATAATATTT
ATTATCGTGGCGCGCAGTAGTGTCTGCGGAACTCAGCTCTCCACTCTTTG
GAATTTCGGCCCTCCGATTCCGATTCGGATTATACGATTATACGACTATA
CGACTGTAGTGCGGCAATACGATTCAGTTTCCGATTCGCCGTGTTTATTG
TTCCGTTTCGGCCGCCGGCTTATTGTCACTTAAATGTTATAGATCGCGTA
AAATATAATAAAATTGTGTGTGAAATTTAAAACCGAAAAAACTGTCAAAA
CACTATGGTTTATAACTCACTGTGTGCGGTTCGTAAAAATTAAAAAGACA
TAAAGTTGACATCGTAAAAAGGTTCTCGCCTCTCCGTTCCAGACTTCGAT
AGTTCTACCTGCAAAGTGTTTTATGACATTTTAAACAAAGTAATTAAAGC
AAAACGTTGGGAGAAAGCATTTCTCCGGCCACACACACACTCACGCACTT
GAGAAGTCGTTAAAAGCCGCAGGAAACTCACTCTGCCATAAAAATACAAG
AGTGCCATTAAAAAAGATCGCGCGCCTATAAATCACACGTACGAAATCCC
GCCGGCACGACGTCCATTCGAATTTCCGCGTAATTGATGACCGCATTTTA
ATTGCTTTTACAACAAATAAAAGATACACACACCCCAAACACACACATGC
GACACACACACTTGTGCCACAGCTGCAAATACAACGCAACCCGAGACCAT
ATGCAAATTTAACAAATTTCGTTGTGAATTCGCCAGCTTCGAGCGAAAAA
GTAACAGAAACAGAAAAGCTGCAAATACAAGCTGCTCGCCAAAAGTTCGC
TAGAGAAAACTTGAGAAAGCAGTTGCCGCCGCCCTAGCCGCCGCCGCCGC
CTCTGCATCCGCCAGCGTTTCAGCCAGCAGCAGCAGCAACAACAACAGCA
GCAACACGATCGCTGGAAGCAACACAAGCAACACCAACAATAGCAGCAGC
AGTCCAAGCAGCAGCAGCAACAACAACAGTAATCTCAATTTGAGCGGAGG
ATCCCTATCGCCGAGCCATTTGAGCCAACATCTGGGCCAATCGCCCAACT
CACCCGTCTCCTCATCGTCGCCCTTCCAGCAGCACCACCCACAGGTGCAG
CAGCAACACCTGAACCACCAGCAGCAGCAACATCTGCACCACCAGCAGCA
GCAACACCACCACCAATACTCCTCGCTCTCGGCCGCTCTTCAGCTACAGC
AGCAACAACACCACATTAGCAAACTAGCCGCCGCCGCAGTTGCCTCGCAC
GGACACGCCCACCAGCAACTGTTGCTAACGCCCCCGTCAGCGGGCAATTC
TCAAGCGGGCGACAGCAGCTGCTCCCCATCGCCCTCGGCATCCGGTAGCT
CCTCGCTACACCGCAGCCTCAACGACAACTCTCCCGGGTCCGCATCCGCG
TCCGCCTCCGCATCCGCGGCCAGTTCCGTCGCTGCTGCTGCAGCCGCCGC
CGCCGCTGCGGCTAGCTCCTCGTTTGCCATCCCCACCAGCAAGATGTATC
CGTACGTGTCTAACCACCCTAGCAGCCATGGAGGGCTCTCCGGAATGGCC
GGCTTCACCGGACTGGAGGATAAGTCGTGCAGCAGGTACACGGACACTGT
CATGAACAGCTACCAGTCGATGAGCGTACCTGCCTCGGCATCTGCACAGT
TCGCTCAGTTCTATCAACATGCCACAGCCGCCGCATCCGCGGTATCCGCG
GCCAGTGCCGGCGCGATCGGCGTGGACTCGCTGGGAAATGCCTGCACACA
GCCCGCCTCCGGCGTGATGCCAGGGGCAGGGGGAGCGGGCGGAGCCGGTA
TCGCCGATCTGCCCAGGTATCCCTGGATGACGCTTACAGACTGGATGGGA
AGCCCCTTCGAGCGTGTCGTTTGTGGCGATTTCAACGGCCCCAACGGCTG
TCCACGAAGGCGCGGTCGCCAGACCTACACTCGCTTCCAGACCCTCGAAC
TGGAGAAGGAGTTTCACTTCAACCACTACTTAACTCGGCGAAGGCGCATC
GAGATCGCACATGCCCTCTGCCTGACCGAGCGACAGATCAAGATCTGGTT
TCAGAACCGTCGCATGAAGCTGAAGAAGGAGTTACGAGCCGTCAAGGAAA
TAAATGAACAGGCGCGACGCGATCGAGAGGAGCAGGAGAAAATGAAGGCC
CAGGAGACGATGAAATCCGCCCAGCAGAACAAGCAAGTGCAACAGCAGCA
GCAACAGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCACCAACAGC
AGCAACAACAGCCGCAGGACCACCACTCGATCATCGCACACAATCCAGGC
CACTTGCACCACTCGGTGGTAGGTCAAAACGATCTCAAGCTCGGCCTTGG
CATGGGCGTGGGCGTCGGAGTGGGCGGCATCGGGCCGGGCATCGGTGGCG
GCTTGGGCGGCAATCTGGGCATGATGAGCGCCCTGGACAAGAGCAATCAC
GACCTGCTAAAGGCGGTCAGCAAAGTCAACTCCTAAGCTGACAACCACCC
ATCGCCCAGCCGAGCCAACGAGCCAATCTTCCACCAGCCGCACCACTAGC
ACCACCACCGCAGCCATCGCCCGGATCAGCGTCCGGCGTTATTTTTCGTC
TCCTCGTCTGTGTAGCGCGCGAGATAGCAAGCAGAAGATAAACTCGATAA
CTAAAATACGTAAAGTTTTACATAGTAAATAGTTGCATAAGTCTACAAAA
AACATACATACACGCAAATGGCTGGGTGCGATGGCTTAGAGGCAATTAAC
TGGACCGGGTTTTATTGCTGTGGATCGACGCTTTCTGAGGTTTCCCCAAT
TGTAGTTGTCTATTTGATAGAGCAACGCATGCGATTCCCTTCCAGATCTC
CAGTGGCAATTTGTGTATTCGACATTTCTTCCATACTTTCGCTTTTGCAA
CCCCTAAATCGGCAATTCAACCCCCAGTGTAGAGTCTCTGGGCCAACGGG
CCCAATTCGGTAATATTAATGGATAACTTGAACTACTTAGAATAGCGGCA
AAGGCCTAAGGAAGAAGTTAGCAGGAGACGCGATCTATATAAATGAATAT
TGACGAAATGAGCGATTTTTGATAGTCAGAGAACTCCGTTGCCCACCATC
AACCAACTTTCAATGGAAGTGGTTTTGGGGAAGGCAACTCGACGGATTCG
AGTGTAAAATTATTTGCGACTGCTATAGGATAACCTAGTTCGATATTTAG
AGCCACGTTCGACTATGTTAAACGGTATATGAATACATAAATATATGGAT
ATGCTTACAGATTAAAGATACTTACCTATAGAGTTATAGAGCGTACGTTT
TGTATCCACCTATTTATTGGAAATTTATGTTTATGTTTTCAAAAGAAAAA
CCCCTCTTCCAATGTTTTGTTAAGTGATGTGTTTACTGTGTGTTTGCTGT
TTTCGTTGTATGCCAACGCTTGAATACAATGATTTCTTCAATGCCATATT
AATCTTAACTCGAGAGCAAGTAAACAATTAAGCAGCTAAAGTAAAGTACG
CAAAACAATTGCGCAAGTATTTCCATAAATACCAGTTGTAAGAACAAACG
GTATGCAACATACCTAAAAGCATAATCACGATTTCAAATACGTAATATTA
ATAATGAGATATGAAACAGAAATGGAGTAAGACGGAGCTGAGAAATTAAA
TGTCGTTTGCCAGTGACTAAAATTTTAAATTAACTACCAATAAGCAGATA
ACTAAATATGCATCGATTGAAAGGCCTACAAAGCTACAAAAAAAAAAACA
AACAGAAAAGAAACTCTGGAATACGTATTAGCTTAAGGTTGCAACCACAA
ACAAACTGTCGAATGAAGGCCAAGAAGGGAGAGTTATAAAAATGGAAATA
TTGGCAGAACCCATATACGTAGATTTCAAACTTCCCAAAATAAAATTTAC
CTAGCGTAGTCTCTCGCGGATTGCAAGTTGAATTAAAGTCAGAAACTCTA
TTTATTATACAAAACCGAAGTGGATGGCTTTCACAGCGCATATTTACATA
AACAATTATTGACAAATATATATGAATATATATTACAAATATATACAACT
ATGATCTAACATGTGTATGTATAAACACCTAAATGTATGTGTATCTAGTA
TGGTTAACACAAAAAGCAGTCGAGTCAAAGTAAAAGTCACCTTTTGCCCA
AAACCAGACACCACCAAAAATAAGCATCCCCAACCAGCGCTCATGTTTTT
TCTCGATGGGATCCCTACTATCCTACTGTCCTTTGTTTTTCAAGTCCCAC
TGGTCGAGTGATATTCCCGGGTGGCGACAACCTTTTGCCTTGTTTCACAA
CCGGATTGAAGGAAACTGAGTGGCTTCTGTTCCTGTTCCCGCTTCAGTTT
TGGTTTTTGTTGCGTTTCAGTTTGATTTAAGTTAAATGCTTAGTCTTATT
TGGACGGCCTAGCAAATTAGATCGTAAATCAATATTTTGTTTGAACCCTA
CTGCTAAAACTTCTGTTAATTTTACTTTAAGTTTAGTTGTGACGAATTGT
GTATTATATAATTTTATGCGATTTTAAAATGAATGCGAAAAAAATTAAAA
AAAAAGAAAAAAAAAAAAAAAA

RE04174.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
abd-A-RC 5022 abd-A-RC 101..4952 1..4851 24145 99.8 Plus
abd-A.a 5467 abd-A.a 101..4952 1..4851 24145 99.8 Plus
abd-A-RA 4753 abd-A-RA 1287..4753 1380..4846 17290 99.9 Plus
abd-A-RA 4753 abd-A-RA 8..1286 1..1278 6340 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:55:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12632125..12634566 4851..2410 12150 99.8 Minus
chr3R 27901430 chr3R 12653424..12654543 1119..1 5505 99.6 Minus
chr3R 27901430 chr3R 12651637..12652401 1882..1118 3780 99.6 Minus
chr3R 27901430 chr3R 12650553..12650812 2139..1880 1300 100 Minus
chr3R 27901430 chr3R 12634634..12634859 2412..2187 1130 100 Minus
chr3R 27901430 chr3R 12483415..12483622 2412..2205 395 79.3 Minus
chr3R 27901430 chr3R 2651289..2651444 2381..2226 390 83.3 Minus
chr3R 27901430 chr3R 2724225..2724386 2381..2220 345 80.9 Minus
chr3R 27901430 chr3R 2691143..2691303 2220..2380 340 80.7 Plus
chr3R 27901430 chr3R 12646922..12646973 2188..2137 260 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:27:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16807622..16810063 4851..2410 12165 99.9 Minus
3R 32079331 3R 16828921..16830040 1119..1 5535 99.8 Minus
3R 32079331 3R 16827135..16827899 1882..1118 3810 99.9 Minus
3R 32079331 3R 16826051..16826310 2139..1880 1300 100 Minus
3R 32079331 3R 16810131..16810356 2412..2187 1130 100 Minus
3R 32079331 3R 16658852..16659059 2412..2205 395 79.3 Minus
3R 32079331 3R 6825490..6825645 2381..2226 390 83.3 Minus
3R 32079331 3R 6898360..6898521 2381..2220 345 80.9 Minus
3R 32079331 3R 6865315..6865475 2220..2380 340 80.7 Plus
3R 32079331 3R 16822421..16822472 2188..2137 260 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:22:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16548453..16550894 4851..2410 12165 99.8 Minus
3R 31820162 3R 16569752..16570871 1119..1 5545 99.8 Minus
3R 31820162 3R 16567966..16568730 1882..1118 3810 99.8 Minus
3R 31820162 3R 16566882..16567141 2139..1880 1300 100 Minus
3R 31820162 3R 16550962..16551187 2412..2187 1130 100 Minus
3R 31820162 3R 6566321..6566476 2381..2226 390 83.3 Minus
3R 31820162 3R 6639191..6639352 2381..2220 345 80.8 Minus
3R 31820162 3R 6606146..6606306 2220..2380 340 80.7 Plus
3R 31820162 3R 16399683..16399797 2412..2298 275 82.6 Minus
3R 31820162 3R 16563252..16563303 2188..2137 260 100 Minus
X 23527363 X 5761086..5761155 1397..1466 200 85.7 Plus
2R 25260384 2R 9459751..9459819 1397..1465 195 85.5 Plus
3R 31820162 3R 16399828..16399890 2267..2205 180 85.7 Minus
3R 31820162 3R 6541858..6541946 2224..2312 175 79.7 Plus
3R 31820162 3R 6541962..6542014 2328..2380 175 88.6 Plus
Blast to na_te.dros performed 2019-03-16 06:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6950 1377..1600 293 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2343..2535 1377..1569 289 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2401 1377..1468 271 77.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6912 1377..1521 267 67.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6925 1377..1514 245 67.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7001 1384..1679 239 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2423 1403..1522 216 67.8 Plus
roo 9092 roo DM_ROO 9092bp 1062..1168 1414..1525 188 67.3 Plus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 742..1041 3762..4063 183 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2419 1427..1538 167 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6860 1429..1569 145 60.4 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3245..3624 1068..1440 122 53.8 Plus

RE04174.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:56:52 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12651830..12652062 1457..1689 99 == Minus
chr3R 12652123..12652240 1279..1396 99 == Minus
chr3R 12632120..12632578 4398..4856 99 == Minus
chr3R 12632687..12634408 2568..4289 99 == Minus
chr3R 12634488..12634564 2412..2488 100 <- Minus
chr3R 12634635..12634858 2188..2411 100 <- Minus
chr3R 12646923..12646970 2140..2187 100 <- Minus
chr3R 12650553..12650809 1883..2139 100 <- Minus
chr3R 12651637..12651756 1763..1882 100 == Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:43:12 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RB 105..1773 1118..2786 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:54:15 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RB 105..1773 1118..2786 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:20:48 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RB 105..1773 1118..2786 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:35:01 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RB 105..1773 1118..2786 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:25:48 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RB 105..1773 1118..2786 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:43:11 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RC 1..4847 1..4846 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:54:15 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RC 1..4847 1..4846 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:48 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RD 10..4866 1..4856 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:35:01 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RB 1..94 1026..1118 98 -> Plus
abd-A-RB 215..3946 1119..4851 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:25:48 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
abd-A-RD 10..4866 1..4856 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:56:52 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16807617..16810061 2412..4856 99 <- Minus
3R 16810132..16810355 2188..2411 100 <- Minus
3R 16822422..16822469 2140..2187 100 <- Minus
3R 16826051..16826307 1883..2139 100 <- Minus
3R 16827135..16827897 1120..1882 99 <- Minus
3R 16828921..16830040 1..1119 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:56:52 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16807617..16810061 2412..4856 99 <- Minus
3R 16810132..16810355 2188..2411 100 <- Minus
3R 16822422..16822469 2140..2187 100 <- Minus
3R 16826051..16826307 1883..2139 100 <- Minus
3R 16827135..16827897 1120..1882 99 <- Minus
3R 16828921..16830040 1..1119 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:56:52 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16807617..16810061 2412..4856 99 <- Minus
3R 16810132..16810355 2188..2411 100 <- Minus
3R 16822422..16822469 2140..2187 100 <- Minus
3R 16826051..16826307 1883..2139 100 <- Minus
3R 16827135..16827897 1120..1882 99 <- Minus
3R 16828921..16830040 1..1119 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:48 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12648144..12648191 2140..2187 100 <- Minus
arm_3R 12651773..12652029 1883..2139 100 <- Minus
arm_3R 12633339..12635783 2412..4856 99 <- Minus
arm_3R 12635854..12636077 2188..2411 100 <- Minus
arm_3R 12652857..12653619 1120..1882 99 <- Minus
arm_3R 12654643..12655762 1..1119 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:13:33 Download gff for RE04174.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16548448..16550892 2412..4856 99 <- Minus
3R 16550963..16551186 2188..2411 100 <- Minus
3R 16563253..16563300 2140..2187 100 <- Minus
3R 16566882..16567138 1883..2139 100 <- Minus
3R 16567966..16568728 1120..1882 99 <- Minus
3R 16569752..16570871 1..1119 99   Minus

RE04174.pep Sequence

Translation from 1793 to 2785

> RE04174.pep
MYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASAS
AQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGG
AGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQT
LELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAV
KEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQH
QQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGI
GGGLGGNLGMMSALDKSNHDLLKAVSKVNS*

RE04174.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:17:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17922-PA 596 GF17922-PA 263..596 1..330 1777 97.9 Plus
Dana\GF17924-PA 391 GF17924-PA 261..362 104..204 354 68.6 Plus
Dana\GF17789-PA 378 GF17789-PA 287..361 114..202 323 69.7 Plus
Dana\GF17790-PA 447 GF17790-PA 275..381 81..196 304 55.6 Plus
Dana\GF17190-PA 430 GF17190-PA 239..324 124..196 281 62.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16810-PA 592 GG16810-PA 261..592 1..330 1798 99.4 Plus
Dere\Ubx-PA 381 GG16812-PA 241..353 109..204 364 63.5 Plus
Dere\Antp-PA 374 GG10169-PA 283..357 114..202 322 69.7 Plus
Dere\GG10180-PA 467 GG10180-PA 326..432 81..196 304 55.6 Plus
Dere\ftz-PA 420 GG13687-PA 261..318 139..196 276 81 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18074-PA 529 GH18074-PA 201..529 1..330 1240 87.4 Plus
Dgri\GH19471-PA 382 GH19471-PA 241..353 109..204 362 63.5 Plus
Dgri\GH19475-PA 385 GH19475-PA 294..368 114..202 321 69.7 Plus
Dgri\GH19477-PA 576 GH19477-PA 285..391 81..196 306 55.6 Plus
Dgri\GH19479-PA 599 GH19479-PA 340..456 109..231 269 48.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
abd-A-PD 330 CG10325-PD 1..330 1..330 1741 100 Plus
abd-A-PC 330 CG10325-PC 1..330 1..330 1741 100 Plus
abd-A-PA 330 CG10325-PA 1..330 1..330 1741 100 Plus
abd-A-PB 590 CG10325-PB 261..590 1..330 1741 100 Plus
Ubx-PD 363 CG10388-PD 240..363 109..234 366 59.2 Plus
Ubx-PE 380 CG10388-PE 213..380 59..234 360 48.3 Plus
Ubx-PA 389 CG10388-PA 260..389 104..234 356 58.5 Plus
Ubx-PC 372 CG10388-PC 240..372 109..234 353 55.9 Plus
Ubx-PB 346 CG10388-PB 240..346 109..234 352 58.7 Plus
Ubx-PF 355 CG10388-PF 240..355 109..234 344 57.9 Plus
Dfd-PA 586 CG2189-PA 344..476 109..247 302 51.4 Plus
Antp-PK 361 CG1028-PK 269..338 107..196 299 70 Plus
Antp-PG 361 CG1028-PG 269..338 107..196 299 70 Plus
Antp-PN 374 CG1028-PN 282..351 107..196 299 70 Plus
Antp-PD 374 CG1028-PD 282..351 107..196 299 70 Plus
Antp-PF 365 CG1028-PF 269..342 107..196 296 70 Plus
Antp-PE 365 CG1028-PE 269..342 107..196 296 70 Plus
Antp-PJ 378 CG1028-PJ 282..355 107..196 296 70 Plus
Antp-PI 378 CG1028-PI 282..355 107..196 296 70 Plus
Antp-PL 378 CG1028-PL 282..355 107..196 296 70 Plus
Antp-PM 378 CG1028-PM 282..355 107..196 296 70 Plus
Scr-PB 417 CG1030-PB 170..382 6..196 292 36.3 Plus
Scr-PA 417 CG1030-PA 170..382 6..196 292 36.3 Plus
ftz-PA 410 CG2047-PA 255..405 139..259 255 43 Plus
pb-PB 777 CG31481-PB 102..279 48..231 254 35.1 Plus
pb-PD 772 CG31481-PD 102..274 48..231 251 35.1 Plus
pb-PC 777 CG31481-PC 102..279 48..231 251 34.6 Plus
pb-PA 782 CG31481-PA 102..284 48..231 245 34.7 Plus
Abd-B-PF 323 CG11648-PF 84..314 47..323 218 29 Plus
Abd-B-PJ 270 CG11648-PJ 84..263 47..270 216 30.6 Plus
Abd-B-PI 270 CG11648-PI 84..263 47..270 216 30.6 Plus
Abd-B-PE 270 CG11648-PE 84..263 47..270 216 30.6 Plus
Abd-B-PD 270 CG11648-PD 84..263 47..270 216 30.6 Plus
Abd-B-PA 270 CG11648-PA 84..263 47..270 216 30.6 Plus
Abd-B-PC 270 CG11648-PC 84..263 47..270 216 30.6 Plus
Abd-B-PG 286 CG11648-PG 84..263 47..270 216 30.6 Plus
Abd-B-PH 493 CG11648-PH 307..486 47..270 216 30.6 Plus
Abd-B-PB 493 CG11648-PB 307..486 47..270 216 30.6 Plus
lab-PB 213 CG1264-PB 35..145 71..198 205 41.4 Plus
lab-PA 629 CG1264-PA 451..561 71..198 205 41.4 Plus
zen2-PB 232 CG1048-PB 24..80 139..195 200 64.9 Plus
zen2-PA 252 CG1048-PA 44..100 139..195 200 64.9 Plus
exex-PA 525 CG8254-PA 440..519 139..218 200 47.5 Plus
zen-PA 353 CG1046-PA 91..183 139..231 194 44.1 Plus
Tomosyn-PL 1387 CG17762-PL 659..784 195..306 191 39.4 Plus
Tomosyn-PK 1387 CG17762-PK 659..784 195..306 191 39.4 Plus
ro-PB 350 CG6348-PB 191..342 138..255 188 35 Plus
ro-PA 350 CG6348-PA 191..342 138..255 188 35 Plus
bsh-PC 429 CG10604-PC 267..406 131..265 180 35 Plus
bsh-PB 429 CG10604-PB 267..406 131..265 180 35 Plus
btn-PA 158 CG5264-PA 87..143 139..195 169 57.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23753-PA 529 GI23753-PA 199..529 1..330 1223 87.1 Plus
Dmoj\GI24708-PA 379 GI24708-PA 238..350 109..204 360 63.5 Plus
Dmoj\GI24713-PA 378 GI24713-PA 287..361 114..202 320 69.7 Plus
Dmoj\GI24715-PA 418 GI24715-PA 277..383 81..196 308 55.6 Plus
Dmoj\GI24714-PA 454 GI24714-PA 267..324 139..196 273 79.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23002-PA 562 GL23002-PA 239..562 1..330 1203 88.8 Plus
Dper\GL23004-PA 387 GL23004-PA 246..358 109..204 360 63.5 Plus
Dper\GL22036-PA 395 GL22036-PA 304..378 114..202 322 69.7 Plus
Dper\GL22040-PA 472 GL22040-PA 287..393 81..196 305 55.6 Plus
Dper\GL21778-PA 471 GL21778-PA 291..348 139..196 279 79.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26453-PA 560 GA26453-PA 237..560 1..330 1203 88.8 Plus
Dpse\Ubx-PC 368 GA10294-PC 244..339 109..204 366 70 Plus
Dpse\Ubx-PA 385 GA10294-PA 244..356 109..204 360 63.5 Plus
Dpse\Ubx-PB 360 GA10294-PB 244..331 109..204 344 70.8 Plus
Dpse\Antp-PA 392 GA10215-PA 301..375 114..202 322 69.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15405-PA 588 GM15405-PA 259..588 1..330 1810 100 Plus
Dsec\GM15411-PA 201 GM15411-PA 107..173 138..204 338 89.6 Plus
Dsec\GM10522-PA 374 GM10522-PA 283..357 114..202 322 69.7 Plus
Dsec\GM10524-PA 525 GM10524-PA 325..431 81..196 297 55.6 Plus
Dsec\ftz-PA 413 GM10917-PA 258..315 139..196 277 81 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20268-PA 631 GD20268-PA 302..631 1..330 1802 100 Plus
Dsim\Ubx-PA 338 GD20270-PA 232..310 109..204 353 69.8 Plus
Dsim\GD19515-PA 374 GD19515-PA 283..357 114..202 322 69.7 Plus
Dsim\GD19518-PA 463 GD19518-PA 322..428 81..196 301 55.6 Plus
Dsim\ftz-PA 413 GD19897-PA 258..315 139..196 277 81 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:17:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\abd-A-PA 522 GJ10599-PA 190..522 1..330 1209 86.6 Plus
Dvir\Ubx-PA 378 GJ23925-PA 237..349 109..204 361 63.5 Plus
Dvir\Antp-PA 376 GJ23927-PA 285..359 114..202 320 69.7 Plus
Dvir\GJ23929-PA 303 GJ23929-PA 98..155 139..196 287 87.9 Plus
Dvir\GJ23928-PA 464 GJ23928-PA 288..345 139..196 273 79.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13853-PA 582 GK13853-PA 250..582 1..330 1690 94.6 Plus
Dwil\GK13855-PA 384 GK13855-PA 243..355 109..204 363 63.5 Plus
Dwil\GK10824-PA 374 GK10824-PA 283..357 114..202 322 69.7 Plus
Dwil\GK10825-PA 430 GK10825-PA 274..331 139..196 291 84.5 Plus
Dwil\GK10826-PA 428 GK10826-PA 272..399 81..238 270 44.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26127-PA 590 GE26127-PA 261..590 1..330 1811 100 Plus
Dyak\Ubx-PA 381 GE26131-PA 241..353 109..204 364 63.5 Plus
Dyak\GE25826-PA 375 GE25826-PA 284..358 114..202 322 69.7 Plus
Dyak\GE25827-PA 419 GE25827-PA 278..384 81..196 305 55.6 Plus
Dyak\GE24884-PA 421 GE24884-PA 262..319 139..196 277 81 Plus

RE04174.hyp Sequence

Translation from 1793 to 2785

> RE04174.hyp
MYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASAS
AQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGG
AGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQT
LELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAV
KEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQH
QQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGI
GGGLGGNLGMMSALDKSNHDLLKAVSKVNS*

RE04174.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:43:23
Subject Length Description Subject Range Query Range Score Percent Strand
abd-A-PD 330 CG10325-PD 1..330 1..330 1741 100 Plus
abd-A-PC 330 CG10325-PC 1..330 1..330 1741 100 Plus
abd-A-PA 330 CG10325-PA 1..330 1..330 1741 100 Plus
abd-A-PB 590 CG10325-PB 261..590 1..330 1741 100 Plus
Ubx-PD 363 CG10388-PD 240..363 109..234 366 59.2 Plus