Clone RE04229 Report

Search the DGRC for RE04229

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:42
Well:29
Vector:pFlc-1
Associated Gene/TranscriptCG3558-RA
Protein status:RE04229.pep: gold
Preliminary Size:4096
Sequenced Size:4223

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3558 2003-01-01 Sim4 clustering to Release 3
CG3558 2005-03-04 Blastp of sequenced clone
CG3558 2008-04-29 Release 5.5 accounting
CG3558 2008-08-15 Release 5.9 accounting
CG3558 2008-12-18 5.12 accounting

Clone Sequence Records

RE04229.complete Sequence

4223 bp (4223 high quality bases) assembled on 2005-03-04

GenBank Submission: BT021330

> RE04229.complete
GATATGTTATATTGATAGCTGCTCATCGCTAACTTTCTATTTCCGTGCAG
ATATAATTGTAAATATTTACGCAGAATTGCTTTGGAAACACTACGAAAAT
AGTGCAAAATGAGGCAATAAAGTGCGGGCCGGACTGCCTTCCCTTTCTTG
ACTTCAAAACCCGCGCCAAAAGCGCGAATTTCGTGCTGCAAGAACGCAAA
TCTAGTCCGCAAATCTGCGGAAGTGTTGGTACTACCACTTAATTGTATTT
GTAATTGTAATTGCCAAAGTGCCAAAAAAAAAACGCTGCAAATGCTGCAA
GCGTGAAAACCCATCTAAGAAGGGCCACTAAACAGTAATGGGTGTAGATG
CACGATGCACGGAGAGCGGAAAGCAGCGGAGACGATGACGATGATCAAAT
CTAAATTCATCAGCTTCTAAATATTTAAAAAGCGAGCAACATTGAAATAC
TCACCACTCACACAGTCGGACAAAAGCACAAAACGAGAGATAACAGAGCA
CCAGCACCACCAATTCATGCCAAACGAAACGCACACGGAGCAGTTATCAG
CGGACCAGCGCCACTAAAAGCCACCGAATCGCACACACACCGCACCGACA
ACGATGTGGCTGCGCCAGAGCAGCGGTGGAGGCGTTGCCTCCGTCGGACA
CGTCGGCCCACTGCGACAGCGACCCATCGACGCTGCCACAGACTGCGATC
CGCGCGCTTGCTACGACAGCTTCTGTAAGCACTGGCAGCAGGCCTTCGAG
ATCATCCAGCACAGTGCACCGCCCTCGCACGACGACGTGCTGGGCGTGGT
CTCGCACTTGGACTACATGGTCACCCTGCTGCTCGTGGAGCTGCATCACT
GCAACAAAGTCTCGCTGCCGGCGGCCGAGGCTAGTGGTCCGCCTGCGGCG
CCCTGCCTGGAATTCCTGCTCAGCGAGAATCTGCTGGACAAGCTGTACGA
GTGGGCCTGCACCACGGGACGGTATGCCAACGCTGTGAGGCTGGAGCAGC
TGAAGCTGTACGAACTGCTCGTCAGCCACTCGCGCCACCAGCTGCTCTGC
CACGAGCCCTTCCTGCGACCCCTGCTCAAGATACTGGCATCCAGCCAGGG
CGAGATCTTTCCGCCCGATCTCGAGAAGCGCCTGGTGATCCTGCTGAACC
AGCTGTGCGTGGTTCTTATGCAGAATGTCCACCTGCTGGACCTCTTTTTC
TTCTCCGCCCAGACGCAGGTGCAGGAGCAGATATTAAATGGCAACGTGGC
GCCACCCAAAAGCGGAACCACTACCAACTTCATAATATTTTCGCTGCTTA
TCCCGTACGTGCATCGCGAAGGCAGTCTTGGTCACCAAGCGCGCGATGCT
CTGCTGCTGTGCATGGCGCTTTCGCAGAAGAACTCCAACATTGGAACGTA
CATAGCCCAGTACTCCTCGATCTGCCCGCTGTTGGTGACCGGTCTGGGTG
GGCTTTACTCGCGTCTGCCCAACAGCATCGAGATTAGCTCCATCGACTGG
CACCGGATAACGCCAGACGATGTGACAGAGATCCCGGAGCTGACGCTGTT
CATGAACGCCCTCGAGTTTTGCAATGCGGTGGTGCAGGTGGCCCATGAGA
TGATCAAGCAGCAGTTGCTGGACTTCATGTACCAGGGCTTTATTGTTCCC
GTGCTGGGACCTGCGATCCTTCAGACGAACATCGACTCGCAAATCTCGGC
AATGTCGTACCTGGACCTGATCCTGCGCTCCATCACGGAGCCCGGACTGC
TGAGGGCCTTCGTTCGGTTTCTGCTCGATACGGAAAAGTTTGACGGCGAA
CGGATACTTGATGCCCTGGTCGAGCGCCTGAACTCGCCGGATGCCAATCT
GTGCATGGTCACGATGGCATTGTTTGACACCCTGCTGGGTCTGCACTGCG
AGGACCTGATGCTGGAGCTGCTGCTCAAGTTCATGCTGCCGGGCAAGCAT
GTGCCCATCTCACATCGCCACAAGATCAACAAAATCGATCCGTATTTGAA
TAGCAGTGAGTTCTTCCTCGAGCTCTCGCCCGATGTGATGAAGAGAGCCA
GAGATCTGGCCAGGCCGAAGAGCGTCCACGAGCCTGTGGTGAGTGAACTG
ACGCCTCTGCCGAGTCTCCCCTCTCCGGTCATGAGCAAGACGATTGGAGC
CAACTGGAACTATTACGGAGTGCACACCGGTGATAGTTTGTATGCGAATA
TACAGGCATATCTCTTCGAGGCTCATTGGCGAATCGCCCAGTGTCAAAAG
GATTGCCTAAAATGGGCCAACAGCTATCGCTACCAAAAGTGGCCTCGTCA
CGGGCAAGGAAGAGTCCATGCCCATGCCTTGGAGCTGGCGCGACAGTTCT
TTAGTGAGTTCGGTGGCGGTCCTATCGCCGCCAACGAGACGGGTGAAAAG
CAGCTGGACAGCTTGCAGTCAATTGGCGAGTCAAGCGGCTACGAATCCTT
CAAGTGGCGGCCAGCGGACGAGGAAAGCGAAGCCACGGATACAACTGTGG
CCACGACAGCCAGCGAGGCGGATATGGATCACAATAGCAGCAGCCTTAGC
AGCGTTCTTGGTGCATCCGGCAAACGCGAGTCATGGCGGACTTCGAACAG
CAATCGCAATGAATTAATATTGACGGACCTTGACTTCTCGGAAGATTTGT
TTGCGCAGGGCACCGTAAGCTTAGGTCCCTTTCTCAATGCCATTTGGGGC
AAACTGCAAACCTTCACGAGCAATTCGCTGTACGTCAATCTCCACTTGAC
CGGGCTGATCACTCGCTTGGCCTGGTATCCCCTGCCGTTGATTCACTCGC
TGCTGCTGCGCTCTGACATAGCCATCACATCGGATACGCCCTCTTTTCAC
CAGGTGCTGCGCATTCTGAAGCAGCAAATAGATGCCGAGCTGCCAGTGAC
GGAGGATTCGCTGGAGATCATTGATGTGGCGCGTTCGTCGCTGATTGATC
GAGAGTTCCGCTTGGCAAACGCGCGCAAGGGCAACGAGGGCTCTCCAATG
CATCATAGCCAACAGCAACAGATGGTAACGAACTCCGGCCAGCAGCAGGG
TCAACTGCGATCAGCCTACGCGACCCTCTCGGCCGCCACGCCCGTGCAGG
CCACGCCCACCAGTGCCTACGATCCGTTCAAGCGCAGTGATAACAAGCGT
CGCAGCATCAGCAAATCCATTACCAGCATGTTTAGCAGAAAGTCCGCCTC
CACGTCCACAGCGCCACCCAATGGATCCTCCGCTTCATCTGGCTTATCAC
AAATTTACGCATTCTTCACCGGAGCTGCCTCGAATCTGGTGGGGAATAAT
GCCAGCAACGATGGAAGAGGCATATCACAAGCTCAGACGTCCGCAGGCAC
ATGCGAGACCAGCTTGAGTACGCAGCCCCCAGCGGGAGCATCACGCACAG
GAGCCAACGCGACGTCAACAGCGGCATCGGGAAGCAACAGCAGCATCGCA
GGTTCCACCCTAACGCTCTCCGCCCAGTCGAACACAACCACCCACTCGGC
GAGCACTCTGCACGGTCTGGATGGCGGCCCGTCGACGGGTGGTTTCAACT
CGGAGCCGGCGTCCCTGGACTCGGTGGCCTCCATGGGAATCATCGCCAGC
ACAAGTGGCACCGAGCGATCACGCGATCTGGCCCTATGTGCTGTGCTCAT
GGACGAGTGGCTTAAGGAGCTGGCTGCCATTGCGCAGGAGCAGAGCGTTG
TGCTGGTCACGGAGCAGGGGTCTTTATGATCGCTTGGAACGGAAAGCTTG
TGTATACATATTTTACGGATTTGTTAGCCCTTGTTTGTTTTAACCAGCTA
CTCTTACGAAATTATTCTTTTTACCTGTTAAATTTTCGATATTTATATTT
TAAAAAACAACTTTTAACGAACAATGCAGTTTTGAACAGATTTACAAGTT
AATGCACACGGACTCAACTAAAAAAAAAAAAGAGAAACACTCAACGCGTT
AAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATC
TTAAGTGTTCAGATGTAAACAAATATTCTAATTACCAGCCGTACGCAAAA
TTTACAACGTTTATAGAGAGAATTATATAACACACATACCATGTATACAT
ATGTATTTTTGCAATATATTTTATGCTTTTATGTATGCAAGATCAAATTA
CACAAGTTATGTAAAGCCAACTTGAAAGTATTAAATTGGTCCAAGTAAAT
GCACAGCAAAAAAAAAAAAAAAA

RE04229.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG3558-RA 4221 CG3558-RA 8..4215 1..4207 21000 99.9 Plus
CG3558-RB 4270 CG3558-RB 1..3233 1..3232 16125 99.9 Plus
CG3558-RC 4333 CG3558-RC 1695..4232 1670..4207 12690 100 Plus
CG3558-RC 4333 CG3558-RC 1..1677 1..1676 8345 99.9 Plus
CG3558-RB 4270 CG3558-RB 3231..4169 3269..4207 4695 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:40:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2995072..2996078 1670..2676 4825 98.6 Plus
chr2L 23010047 chr2L 2997431..2998367 3271..4207 4420 98.4 Plus
chr2L 23010047 chr2L 2993184..2994049 412..1277 4315 99.9 Plus
chr2L 23010047 chr2L 2996141..2996700 2673..3232 2740 99.3 Plus
chr2L 23010047 chr2L 2992607..2993018 1..413 2015 99.8 Plus
chr2L 23010047 chr2L 2994315..2994711 1278..1674 1970 99.7 Plus
chr2L 23010047 chr2L 2997132..2997172 3232..3272 205 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:27:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2995431..2996437 1670..2676 5035 100 Plus
2L 23513712 2L 2997790..2998726 3271..4207 4685 100 Plus
2L 23513712 2L 2993543..2994408 412..1277 4330 100 Plus
2L 23513712 2L 2996500..2997059 2673..3232 2800 100 Plus
2L 23513712 2L 2992964..2993377 1..413 2020 99.8 Plus
2L 23513712 2L 2994674..2995070 1278..1674 1985 100 Plus
2L 23513712 2L 2997491..2997531 3232..3272 205 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2995431..2996437 1670..2676 5035 100 Plus
2L 23513712 2L 2997790..2998726 3271..4207 4685 100 Plus
2L 23513712 2L 2993543..2994408 412..1277 4330 100 Plus
2L 23513712 2L 2996500..2997059 2673..3232 2800 100 Plus
2L 23513712 2L 2992964..2993377 1..413 2030 99.7 Plus
2L 23513712 2L 2994674..2995070 1278..1674 1985 100 Plus
2L 23513712 2L 2997491..2997531 3232..3272 205 100 Plus
Blast to na_te.dros performed 2019-03-16 15:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6912 3010..3190 122 58.5 Plus

RE04229.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:41:22 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2992607..2993018 1..413 99 -> Plus
chr2L 2993186..2994049 414..1277 99 -> Plus
chr2L 2994315..2994711 1278..1674 99 -> Plus
chr2L 2995077..2996076 1675..2674 98 -> Plus
chr2L 2996143..2996700 2675..3232 99 -> Plus
chr2L 2997133..2997171 3233..3271 100 -> Plus
chr2L 2997432..2998367 3272..4207 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:48:22 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..3126 604..3729 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:00 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..3126 604..3729 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:50:55 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..3126 604..3729 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:08 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..3126 604..3729 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:51:24 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..3126 604..3729 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:28:44 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..4096 1..4095 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:00 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..4096 1..4095 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:50:55 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..4199 10..4207 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:08 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..4096 1..4095 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:51:24 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
CG3558-RA 1..4199 10..4207 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:41:22 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2992964..2993377 1..413 99 -> Plus
2L 2993545..2994408 414..1277 100 -> Plus
2L 2994674..2995070 1278..1674 100 -> Plus
2L 2995436..2996435 1675..2674 100 -> Plus
2L 2996502..2997059 2675..3232 100 -> Plus
2L 2997492..2997530 3233..3271 100 -> Plus
2L 2997791..2998726 3272..4207 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:41:22 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2992964..2993377 1..413 99 -> Plus
2L 2993545..2994408 414..1277 100 -> Plus
2L 2994674..2995070 1278..1674 100 -> Plus
2L 2995436..2996435 1675..2674 100 -> Plus
2L 2996502..2997059 2675..3232 100 -> Plus
2L 2997492..2997530 3233..3271 100 -> Plus
2L 2997791..2998726 3272..4207 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:41:22 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2992964..2993377 1..413 99 -> Plus
2L 2993545..2994408 414..1277 100 -> Plus
2L 2994674..2995070 1278..1674 100 -> Plus
2L 2995436..2996435 1675..2674 100 -> Plus
2L 2996502..2997059 2675..3232 100 -> Plus
2L 2997492..2997530 3233..3271 100 -> Plus
2L 2997791..2998726 3272..4207 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:50:55 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2992964..2993377 1..413 99 -> Plus
arm_2L 2993545..2994408 414..1277 100 -> Plus
arm_2L 2994674..2995070 1278..1674 100 -> Plus
arm_2L 2995436..2996435 1675..2674 100 -> Plus
arm_2L 2996502..2997059 2675..3232 100 -> Plus
arm_2L 2997492..2997530 3233..3271 100 -> Plus
arm_2L 2997791..2998726 3272..4207 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:46:32 Download gff for RE04229.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2992964..2993377 1..413 99 -> Plus
2L 2993545..2994408 414..1277 100 -> Plus
2L 2994674..2995070 1278..1674 100 -> Plus
2L 2995436..2996435 1675..2674 100 -> Plus
2L 2996502..2997059 2675..3232 100 -> Plus
2L 2997492..2997530 3233..3271 100 -> Plus
2L 2997791..2998726 3272..4207 100   Plus

RE04229.pep Sequence

Translation from 603 to 3728

> RE04229.pep
MWLRQSSGGGVASVGHVGPLRQRPIDAATDCDPRACYDSFCKHWQQAFEI
IQHSAPPSHDDVLGVVSHLDYMVTLLLVELHHCNKVSLPAAEASGPPAAP
CLEFLLSENLLDKLYEWACTTGRYANAVRLEQLKLYELLVSHSRHQLLCH
EPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFFF
SAQTQVQEQILNGNVAPPKSGTTTNFIIFSLLIPYVHREGSLGHQARDAL
LLCMALSQKNSNIGTYIAQYSSICPLLVTGLGGLYSRLPNSIEISSIDWH
RITPDDVTEIPELTLFMNALEFCNAVVQVAHEMIKQQLLDFMYQGFIVPV
LGPAILQTNIDSQISAMSYLDLILRSITEPGLLRAFVRFLLDTEKFDGER
ILDALVERLNSPDANLCMVTMALFDTLLGLHCEDLMLELLLKFMLPGKHV
PISHRHKINKIDPYLNSSEFFLELSPDVMKRARDLARPKSVHEPVVSELT
PLPSLPSPVMSKTIGANWNYYGVHTGDSLYANIQAYLFEAHWRIAQCQKD
CLKWANSYRYQKWPRHGQGRVHAHALELARQFFSEFGGGPIAANETGEKQ
LDSLQSIGESSGYESFKWRPADEESEATDTTVATTASEADMDHNSSSLSS
VLGASGKRESWRTSNSNRNELILTDLDFSEDLFAQGTVSLGPFLNAIWGK
LQTFTSNSLYVNLHLTGLITRLAWYPLPLIHSLLLRSDIAITSDTPSFHQ
VLRILKQQIDAELPVTEDSLEIIDVARSSLIDREFRLANARKGNEGSPMH
HSQQQQMVTNSGQQQGQLRSAYATLSAATPVQATPTSAYDPFKRSDNKRR
SISKSITSMFSRKSASTSTAPPNGSSASSGLSQIYAFFTGAASNLVGNNA
SNDGRGISQAQTSAGTCETSLSTQPPAGASRTGANATSTAASGSNSSIAG
STLTLSAQSNTTTHSASTLHGLDGGPSTGGFNSEPASLDSVASMGIIAST
SGTERSRDLALCAVLMDEWLKELAAIAQEQSVVLVTEQGSL*

RE04229.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15501-PA 1041 GF15501-PA 3..1039 2..1038 4714 87.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24907-PA 1039 GG24907-PA 1..1039 1..1041 5404 96.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13096-PA 1066 GH13096-PA 35..1064 20..1038 4264 81.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG3558-PA 1041 CG3558-PA 1..1041 1..1041 5352 100 Plus
CG3558-PC 1049 CG3558-PC 1..1049 1..1041 5333 99.2 Plus
CG3558-PB 1028 CG3558-PB 1..1028 1..1041 5265 98.8 Plus
CG3558-PD 1036 CG3558-PD 1..1036 1..1041 5246 98 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14169-PA 1066 GI14169-PA 31..1064 20..1038 4186 79.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19323-PA 1067 GL19323-PA 28..1065 18..1038 4399 84 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25918-PA 1081 GA25918-PA 28..1079 18..1038 4432 84.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18385-PA 390 GM18385-PA 1..210 151..360 1107 98.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23198-PA 827 GD23198-PA 1..827 212..1041 4328 98.3 Plus
Dsim\GD12003-PA 191 GD12003-PA 1..184 1..184 988 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17503-PA 1048 GJ17503-PA 31..1046 20..1038 4209 82.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23746-PA 1097 GK23746-PA 18..1095 6..1038 4228 78.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18198-PA 1050 GE18198-PA 1..1050 1..1041 5414 97 Plus

RE04229.hyp Sequence

Translation from 603 to 3728

> RE04229.hyp
MWLRQSSGGGVASVGHVGPLRQRPIDAATDCDPRACYDSFCKHWQQAFEI
IQHSAPPSHDDVLGVVSHLDYMVTLLLVELHHCNKVSLPAAEASGPPAAP
CLEFLLSENLLDKLYEWACTTGRYANAVRLEQLKLYELLVSHSRHQLLCH
EPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFFF
SAQTQVQEQILNGNVAPPKSGTTTNFIIFSLLIPYVHREGSLGHQARDAL
LLCMALSQKNSNIGTYIAQYSSICPLLVTGLGGLYSRLPNSIEISSIDWH
RITPDDVTEIPELTLFMNALEFCNAVVQVAHEMIKQQLLDFMYQGFIVPV
LGPAILQTNIDSQISAMSYLDLILRSITEPGLLRAFVRFLLDTEKFDGER
ILDALVERLNSPDANLCMVTMALFDTLLGLHCEDLMLELLLKFMLPGKHV
PISHRHKINKIDPYLNSSEFFLELSPDVMKRARDLARPKSVHEPVVSELT
PLPSLPSPVMSKTIGANWNYYGVHTGDSLYANIQAYLFEAHWRIAQCQKD
CLKWANSYRYQKWPRHGQGRVHAHALELARQFFSEFGGGPIAANETGEKQ
LDSLQSIGESSGYESFKWRPADEESEATDTTVATTASEADMDHNSSSLSS
VLGASGKRESWRTSNSNRNELILTDLDFSEDLFAQGTVSLGPFLNAIWGK
LQTFTSNSLYVNLHLTGLITRLAWYPLPLIHSLLLRSDIAITSDTPSFHQ
VLRILKQQIDAELPVTEDSLEIIDVARSSLIDREFRLANARKGNEGSPMH
HSQQQQMVTNSGQQQGQLRSAYATLSAATPVQATPTSAYDPFKRSDNKRR
SISKSITSMFSRKSASTSTAPPNGSSASSGLSQIYAFFTGAASNLVGNNA
SNDGRGISQAQTSAGTCETSLSTQPPAGASRTGANATSTAASGSNSSIAG
STLTLSAQSNTTTHSASTLHGLDGGPSTGGFNSEPASLDSVASMGIIAST
SGTERSRDLALCAVLMDEWLKELAAIAQEQSVVLVTEQGSL*

RE04229.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG3558-PA 1041 CG3558-PA 1..1041 1..1041 5352 100 Plus
CG3558-PC 1049 CG3558-PC 1..1049 1..1041 5333 99.2 Plus
CG3558-PB 1028 CG3558-PB 1..1028 1..1041 5265 98.8 Plus
CG3558-PD 1036 CG3558-PD 1..1036 1..1041 5246 98 Plus