Clone RE04457 Report

Search the DGRC for RE04457

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:44
Well:57
Vector:pFlc-1
Associated Gene/TranscriptTrf4-1-RC
Protein status:RE04457.pep: gold
Preliminary Size:3553
Sequenced Size:4101

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11265 2002-01-01 Sim4 clustering to Release 2
CG11265 2003-08-12 Blastp of sequenced clone
CG11265 2008-04-29 Release 5.5 accounting
CG11265 2008-08-15 Release 5.9 accounting
CG11265 2008-12-18 5.12 accounting

Clone Sequence Records

RE04457.complete Sequence

4101 bp (4101 high quality bases) assembled on 2003-08-12

GenBank Submission: BT010282

> RE04457.complete
AATCGATTCGTGAACCAGCTCTATCGCGAAACGGTCGCGTGTTCGCACGC
AAATTGCAATATAAATCCACAGAAATTGACAGGGAACGTTGCTAAAGGGC
GAAAAACAATCGTGCCGCGATTGAGGCCTGCGATCTGCACAGGAAATGCA
CAATTGCGAAGCGCAATTTGATAAATTCGCACTTGAATGCTGACAGCATT
CAAAGAGGTTTAGTCCCGGCAGCGACTTTAATTAATTTTTCCCTGTGGAG
CACAAAGATCACATCGGATCTATATAGAGTCACGTCTATATATTCAGACC
ACCAGGACGCAGAGGATAGAGGTGAAAGGACGAAGCGAAGGAGAGACGCG
CGCCCCCCTCGTTTCCCGCCCAGCCAACAGCCGTGTGAACCCGTCTTGAA
TGGATCCATTTGTTGGCTGGTTTCAGAAGGAACAGGAGGGACCATCGCTG
TGCACATGGTTAAAGATTTGGGAGACGAATGCCCAAGAGATGGGCGCATT
GCTTAATCAACAGCTACAGCAGGCGACGACGATCAACGGGAGCACGAGCA
GCAGCAGCAGCAGCAGCAATAGTGGTAACAACAACAACAACAACAACAAT
AACATCATCAATAACACTATCACCAACACGACCAATAACACTGGTAACAA
TTCATCGGCCAAACCCTACTTATCGCGACCCTACAGCTCGCTAAATCGGG
TGCTCAATTTCCGAGCGGATTCCCTGGAGATCCTGCAGCAGCAACAACAA
CAGCAGCAGCTCAACGGGACCACTCAGCGCAACAGCACCAACATCAATAC
CACAAGCGGCGGCAGCACTAGCTCGTCGGCAGATTCCACCACGAATCGGG
ACAATAACTCACCCGCCAATAGCAGTTCAACCAACGGACCCGGAGCAGGA
ACGGGAACGTCAACAGGAGCAGGAGGTACCGGTACAAATAGTCCGGCGAC
GACAGCGTCAAGCACAGCTGCGACCACGACTGGTCCAGCCACTAGTATGA
GCGACACCAGCAACAACCCGCCACAATCAACGACCACGCCCGCCAGCCGC
ACGAACAGCATCTACTACAATCCATCGCGGAAGAAACGACCGGAGAACAA
GGCTGGCGGAGCCCACTACTATATGAACAACCATATGGAGATGATCGCCA
AGTACAAGGGCGAACCGTGGCGCAAGCCGGACTATCCGTATGGCGAGGGC
GTTATCGGGCTGCACGAGGAGATCGAGCATTTCTATCAGTACGTCCTGCC
CACGCCCTGCGAACACGCCATCCGCAACGAGGTGGTCAAGCGTATCGAGG
CCGTTGTCCATTCCATCTGGCCACAGGCAGTAGTCGAGATCTTTGGCTCC
TTTCGCACTGGCCTCTTTTTGCCCACCTCCGACATAGATCTCGTTGTGTT
AGGTTTGTGGGAGAAGCTGCCGCTGAGAACGCTGGAGTTCGAGCTAGTGA
GCCGTGGTATCGCCGAGGCTTGTACGGTGCGTGTTCTGGACAAGGCATCA
GTGCCCATCATCAAGCTGACGGACCGGGAAACGCAAGTGAAGGTAGACAT
ATCGTTCAACATGCAGAGTGGTGTTCAGTCGGCGGAGCTGATTAAGAAGT
TTAAGCGCGACTATCCAGTGCTGGAGAAGCTAGTGCTTGTGCTGAAGCAG
TTCTTACTACTTCGCGATCTCAACGAGGTGTTCACGGGCGGCATCTCCTC
CTACTCGCTGATCCTTATGTGCATCAGCTTCCTGCAGATGCATCCGCGCG
GTATCTACCACGATACAGCCAATCTGGGGGTGCTTCTCCTCGAGTTCTTC
GAACTTTATGGACGTCGCTTCAACTACATGAAGATCGGCATCTCCATAAA
GAACGGTGGCCGCTACATGCCCAAGGATGAGCTGCAGCGTGACATGGTCG
ATGGCCATCGACCCTCGCTCCTGTGCATCGAGGATCCGCTGACGCCAGGC
AATGATATCGGTCGAAGCAGCTACGGCGTCTTCCAGGTGCAACAGGCATT
CAAGTGCGCCTACCGCGTGCTCGCCCTTGCCGTCAGTCCGCTCAACCTTC
TCGGCATCGATCCGCGCGTCAACTCGATACTGGGTCGAATCATTCACATC
ACCGACGACGTGATCGATTATCGCGAATGGATCCGCGAGAACTTCGAACA
TCTGGTGGTGGTGGATCGTATCTCGCCGCTGCCCACTGCCGCTCCCACTG
CGTACGCCACCGCCAATGGGGCGCCAAAATATGTGATTATGCCCTCGGGC
GCCGTTGTCCAGCAGCTGTACCATCATCCGGTGCAGGTGCCCACCGCTCA
CGGGCACAGCCATGCGCACAGCCACAGTCACGGGCACGCGCATCCTGGCG
CCCATCTGTGCCAGCCGTATGTGACCGGGACCACTGTATCTGCTGTAACG
ACGACTACAACGATGGCGGTGGTGACCGTGGGCGTGTCAGCCGGCGGAGT
CCAACAGCAGCAACAGCAACAGAATGCGACGGCCCATACCCACTCGCAAC
AGCAGACACAGAACCAATCGCAGTCGCGCCATAGACGCGGCAGCACCTCG
TCGGGCGATGACTCCGAGGATAGCAAGGACGGCGATGTTGTCGAGACGAC
GTCGAGTGCTCAGGAGGTCGTTGACATCGCGCTATCGACGCCAAATGGCC
TGGCCAACATGTCCATGCCCATGCCAGTGCATGCTGTCGGAATGCCTGCG
TCGAACAGTTGGAGCGGTAATGGCAATGGAAACGGAAACAGCAGCTCATC
CACGGGCTCGTCGCCGGAAATCGCACACATCGCTGCCCAGGAAATGGACC
CCGAGCTTGAGGATCAACAGCAACAACAGCAGCACCAAGAGACTTCTGGA
GGTAATGGCTTCATCCGACCGGGTGACGTCGGCACCGGTTCCAACAGGGG
AGGCGGTGACGGCAGTGGCGGCCGCAATTACAACCAGCGGAACAACCACA
ACTCCAGCGGCTACTACCACCAGCAGTACTACGTGCCACCGCCGATGCAA
CAGCAGCTGAGCAAGTCCAACTCCTCCTCCAACTATCACCAGCAACACCA
TCACAGCCACAGCCATGGCAATCATAGTCACCGACAACAGCATCACCACC
AGCAGCAGCACCACCACCAGCAGCGGCCGCAGCATCTGCGTGTGGGCGGC
GGCAATCGATACCAGAAATCGTTGGGCGGATCGCCCATCATCAGTGCTGG
CAATGCGTCGAACAGCAGCAGTAATTGCAGCAACAGCAGCAGCAGCAGCG
GCAGCAACAACAGCCGACTGCCGCCGCTAAGGGGCACGCTGGTCAACTCA
TCGTCAGCAATATCAATCATTTCCATATCCTCAGAATCATCCATTGCTAG
CAGCAGCTCCAGTTCGTCAAGATCCGGTCAGGATCAGCAGCGTGACGAGC
GATAGGAATAGGATGTAGGAAGAGATTGTGTATGTCTATGACACAGAGAG
AAAGAGAGTGCGACACAGAGGGACAGAGAATGAGAGAGAAAGAGATAGTT
ACGGTGTTAGCAATATTTATGGGTTACATTTCTTTCTCAGGTTAATTGTA
AACTACGCTGCATTTTTCTAATAAATATCATTGACCCCCCCGCCCCCCCG
CCTCTACCTAATCCGAAAGCATCTCCTCAACCAATGTAACTGCGATCAGA
TTTTCTTTTACACTGCTGTCTTGCTTAAATTGGGAGAGCGACGCAGACCT
ACTAAGCCTAGTGTTAGGAACTTTGCCTCTGATCGCGCTAAATGTATTTC
AGTTTGTTTCTAAAATAAACATGAAAGCAAAGAATATATATATATATATA
TATATATATTTATATATATAGATATATATTAAATTAAATTAAATTGTACC
ATAAGCATAACTGTTAGCTCATAAGTAGATTGTAAGGGTTTAAAAGATCG
ATAAACTGAAGTATGAAATTATGCTAATCTCTTTTCCCATACCCCCCCCC
CCCTTTTTATCCATCATCATGCGCATTCAAGCTTCTAAAGTATTTTGTAG
TTTCTGAAATGCTCTCCGTCTAGTGCAATGGTAAACATTTTTGCAAACGT
AACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAAAAAA
A

RE04457.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:11:13
Subject Length Description Subject Range Query Range Score Percent Strand
Trf4-1.d 4674 Trf4-1.d 165..4267 1..4101 20445 99.9 Plus
Trf4-1-RE 4267 Trf4-1-RE 165..4267 1..4101 20445 99.9 Plus
Trf4-1-RF 4083 Trf4-1-RF 666..4083 686..4101 17020 99.9 Plus
Trf4-1-RF 4083 Trf4-1-RF 93..666 1..574 2870 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8458030..8459354 2763..4085 6545 99.8 Plus
chrX 22417052 chrX 8454886..8456111 179..1404 6130 100 Plus
chrX 22417052 chrX 8456216..8456900 1401..2085 3425 100 Plus
chrX 22417052 chrX 8457110..8457790 2083..2763 3405 100 Plus
chrX 22417052 chrX 8452369..8452547 1..179 895 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:27:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8566296..8567636 2763..4101 6625 99.8 Plus
X 23542271 X 8563152..8564377 179..1404 6130 100 Plus
X 23542271 X 8564482..8565166 1401..2085 3425 100 Plus
X 23542271 X 8565376..8566056 2083..2763 3405 100 Plus
X 23542271 X 8560635..8560813 1..179 895 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 8574394..8575734 2763..4101 6635 99.7 Plus
X 23527363 X 8571250..8572475 179..1404 6130 100 Plus
X 23527363 X 8572580..8573264 1401..2085 3425 100 Plus
X 23527363 X 8573474..8574154 2083..2763 3405 100 Plus
X 23527363 X 8568733..8568911 1..179 895 100 Plus
Blast to na_te.dros performed 2019-03-15 23:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2404..3019 506..1126 374 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2578..2986 521..915 298 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7050 737..1069 281 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6944 2919..3139 274 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2294..2834 2722..3279 274 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2663 733..1070 251 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2292..2644 563..921 248 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6932 733..929 243 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6832..7015 735..922 236 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6822 544..649 235 70.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2254..2549 2950..3241 234 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..7058 2810..3127 231 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2408 551..650 228 71.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2367..2666 736..1033 224 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..7079 733..1047 222 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2800 2813..3286 221 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2409..2685 733..1014 214 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..7200 2810..3241 213 54.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2349..2682 733..1076 200 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7034 2813..3139 198 56.4 Plus
roo 9092 roo DM_ROO 9092bp 1064..1180 733..846 198 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6884 733..822 192 72.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2626..2982 2804..3136 190 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6953 733..876 189 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..7088 2810..3118 175 57 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6813..7088 2810..3100 153 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2541 780..1027 148 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6827 2452..2547 140 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6868..6922 2451..2505 130 75 Plus
roo 9092 roo DM_ROO 9092bp 1057..1176 2943..3065 129 60.5 Plus
roo 9092 roo DM_ROO 9092bp 1111..1179 735..805 125 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6900 2452..2545 122 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2806..2973 2813..2980 121 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6932 2453..2556 119 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1556..1584 732..760 118 89.7 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 524..594 723..792 118 64.8 Plus
TART-A 13424 TART-A 13424bp 909..937 732..760 118 89.7 Plus
TART-A 13424 TART-A 13424bp 12087..12115 732..760 118 89.7 Plus
TART-C 11124 TART-C TARTC 11124bp 7049..7129 744..821 118 67.5 Plus

RE04457.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:46:14 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8452369..8452547 1..179 100 -> Plus
chrX 8454887..8456109 180..1402 100 -> Plus
chrX 8456218..8456898 1403..2083 100 -> Plus
chrX 8457111..8457790 2084..2763 100 -> Plus
chrX 8458031..8459354 2764..4085 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:48:31 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
CG11265-RE 1..3006 400..3405 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:56:02 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
Trf4-1-RE 1..3006 400..3405 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:56 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
Trf4-1-RH 1..3006 400..3405 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:49:21 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
CG11265-RE 1..3006 400..3405 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:47:14 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
Trf4-1-RH 1..3006 400..3405 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:35:25 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
CG11265-RE 1..4087 1..4085 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:56:02 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
Trf4-1-RE 1..4087 1..4085 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:56 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
Trf4-1-RE 7..4093 1..4085 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:49:21 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
CG11265-RE 1..4087 1..4085 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:47:14 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
Trf4-1-RE 314..4400 1..4085 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:14 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
X 8560635..8560813 1..179 100 -> Plus
X 8563153..8564375 180..1402 100 -> Plus
X 8564484..8565164 1403..2083 100 -> Plus
X 8565377..8566056 2084..2763 100 -> Plus
X 8566297..8567620 2764..4085 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:14 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
X 8560635..8560813 1..179 100 -> Plus
X 8563153..8564375 180..1402 100 -> Plus
X 8564484..8565164 1403..2083 100 -> Plus
X 8565377..8566056 2084..2763 100 -> Plus
X 8566297..8567620 2764..4085 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:14 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
X 8560635..8560813 1..179 100 -> Plus
X 8563153..8564375 180..1402 100 -> Plus
X 8564484..8565164 1403..2083 100 -> Plus
X 8565377..8566056 2084..2763 100 -> Plus
X 8566297..8567620 2764..4085 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:56 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8454668..8454846 1..179 100 -> Plus
arm_X 8457186..8458408 180..1402 100 -> Plus
arm_X 8458517..8459197 1403..2083 100 -> Plus
arm_X 8459410..8460089 2084..2763 100 -> Plus
arm_X 8460330..8461653 2764..4085 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:21:12 Download gff for RE04457.complete
Subject Subject Range Query Range Percent Splice Strand
X 8571251..8572473 180..1402 100 -> Plus
X 8572582..8573262 1403..2083 100 -> Plus
X 8573475..8574154 2084..2763 100 -> Plus
X 8574395..8575718 2764..4085 99   Plus
X 8568733..8568911 1..179 100 -> Plus

RE04457.hyp Sequence

Translation from 399 to 3404

> RE04457.hyp
MDPFVGWFQKEQEGPSLCTWLKIWETNAQEMGALLNQQLQQATTINGSTS
SSSSSSNSGNNNNNNNNNIINNTITNTTNNTGNNSSAKPYLSRPYSSLNR
VLNFRADSLEILQQQQQQQQLNGTTQRNSTNINTTSGGSTSSSADSTTNR
DNNSPANSSSTNGPGAGTGTSTGAGGTGTNSPATTASSTAATTTGPATSM
SDTSNNPPQSTTTPASRTNSIYYNPSRKKRPENKAGGAHYYMNNHMEMIA
KYKGEPWRKPDYPYGEGVIGLHEEIEHFYQYVLPTPCEHAIRNEVVKRIE
AVVHSIWPQAVVEIFGSFRTGLFLPTSDIDLVVLGLWEKLPLRTLEFELV
SRGIAEACTVRVLDKASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKK
FKRDYPVLEKLVLVLKQFLLLRDLNEVFTGGISSYSLILMCISFLQMHPR
GIYHDTANLGVLLLEFFELYGRRFNYMKIGISIKNGGRYMPKDELQRDMV
DGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYRVLALAVSPLNL
LGIDPRVNSILGRIIHITDDVIDYREWIRENFEHLVVVDRISPLPTAAPT
AYATANGAPKYVIMPSGAVVQQLYHHPVQVPTAHGHSHAHSHSHGHAHPG
AHLCQPYVTGTTVSAVTTTTTMAVVTVGVSAGGVQQQQQQQNATAHTHSQ
QQTQNQSQSRHRRGSTSSGDDSEDSKDGDVVETTSSAQEVVDIALSTPNG
LANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSSPEIAHIAAQEMD
PELEDQQQQQQHQETSGGNGFIRPGDVGTGSNRGGGDGSGGRNYNQRNNH
NSSGYYHQQYYVPPPMQQQLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHH
QQQHHHQQRPQHLRVGGGNRYQKSLGGSPIISAGNASNSSSNCSNSSSSS
GSNNSRLPPLRGTLVNSSSAISIISISSESSIASSSSSSSRSGQDQQRDE
R*

RE04457.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
Trf4-1-PJ 1001 CG11265-PJ 1..1001 1..1001 5248 100 Plus
Trf4-1-PI 1001 CG11265-PI 1..1001 1..1001 5248 100 Plus
Trf4-1-PH 1001 CG11265-PH 1..1001 1..1001 5248 100 Plus
Trf4-1-PE 1001 CG11265-PE 1..1001 1..1001 5248 100 Plus
Trf4-1-PC 1001 CG11265-PC 1..1001 1..1001 5248 100 Plus

RE04457.pep Sequence

Translation from 399 to 3404

> RE04457.pep
MDPFVGWFQKEQEGPSLCTWLKIWETNAQEMGALLNQQLQQATTINGSTS
SSSSSSNSGNNNNNNNNNIINNTITNTTNNTGNNSSAKPYLSRPYSSLNR
VLNFRADSLEILQQQQQQQQLNGTTQRNSTNINTTSGGSTSSSADSTTNR
DNNSPANSSSTNGPGAGTGTSTGAGGTGTNSPATTASSTAATTTGPATSM
SDTSNNPPQSTTTPASRTNSIYYNPSRKKRPENKAGGAHYYMNNHMEMIA
KYKGEPWRKPDYPYGEGVIGLHEEIEHFYQYVLPTPCEHAIRNEVVKRIE
AVVHSIWPQAVVEIFGSFRTGLFLPTSDIDLVVLGLWEKLPLRTLEFELV
SRGIAEACTVRVLDKASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKK
FKRDYPVLEKLVLVLKQFLLLRDLNEVFTGGISSYSLILMCISFLQMHPR
GIYHDTANLGVLLLEFFELYGRRFNYMKIGISIKNGGRYMPKDELQRDMV
DGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYRVLALAVSPLNL
LGIDPRVNSILGRIIHITDDVIDYREWIRENFEHLVVVDRISPLPTAAPT
AYATANGAPKYVIMPSGAVVQQLYHHPVQVPTAHGHSHAHSHSHGHAHPG
AHLCQPYVTGTTVSAVTTTTTMAVVTVGVSAGGVQQQQQQQNATAHTHSQ
QQTQNQSQSRHRRGSTSSGDDSEDSKDGDVVETTSSAQEVVDIALSTPNG
LANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSSPEIAHIAAQEMD
PELEDQQQQQQHQETSGGNGFIRPGDVGTGSNRGGGDGSGGRNYNQRNNH
NSSGYYHQQYYVPPPMQQQLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHH
QQQHHHQQRPQHLRVGGGNRYQKSLGGSPIISAGNASNSSSNCSNSSSSS
GSNNSRLPPLRGTLVNSSSAISIISISSESSIASSSSSSSRSGQDQQRDE
R*

RE04457.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21834-PA 1092 GF21834-PA 286..821 202..745 2315 82 Plus
Dana\GF16314-PA 394 GF16314-PA 14..350 255..586 744 48.1 Plus
Dana\GF21834-PA 1092 GF21834-PA 1..127 1..130 309 57.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18260-PA 1008 GG18260-PA 1..1005 1..1001 3399 88 Plus
Dere\GG11338-PA 405 GG11338-PA 8..344 254..585 777 47.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24509-PA 489 GH24509-PA 207..486 208..489 1214 80.6 Plus
Dgri\GH13010-PA 359 GH13010-PA 11..306 250..549 1033 66.3 Plus
Dgri\GH19417-PA 340 GH19417-PA 7..328 255..585 755 47.8 Plus
Dgri\GH24510-PA 575 GH24510-PA 1..118 499..625 500 74.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
Trf4-1-PJ 1001 CG11265-PJ 1..1001 1..1001 5248 100 Plus
Trf4-1-PI 1001 CG11265-PI 1..1001 1..1001 5248 100 Plus
Trf4-1-PH 1001 CG11265-PH 1..1001 1..1001 5248 100 Plus
Trf4-1-PE 1001 CG11265-PE 1..1001 1..1001 5248 100 Plus
Trf4-1-PC 1001 CG11265-PC 1..1001 1..1001 5248 100 Plus
Trf4-1-PG 802 CG11265-PG 1..802 200..1001 4220 100 Plus
Trf4-1-PF 802 CG11265-PF 1..802 200..1001 4220 100 Plus
Trf4-2-PB 407 CG17462-PB 9..372 255..608 772 45.9 Plus
Trf4-2-PA 407 CG17462-PA 9..372 255..608 772 45.9 Plus
Larp4B-PD 1521 CG11505-PD 682..1005 616..956 193 26.2 Plus
Larp4B-PA 1521 CG11505-PA 682..1005 616..956 193 26.2 Plus
Larp4B-PB 1531 CG11505-PB 692..1015 616..956 193 26.2 Plus
RhoGAP19D-PB 2109 CG1412-PB 202..665 565..989 181 22.8 Plus
RhoGAP19D-PC 2135 CG1412-PC 202..665 565..989 181 22.8 Plus
RhoGAP19D-PE 2135 CG1412-PE 202..665 565..989 181 22.8 Plus
RhoGAP19D-PA 2181 CG1412-PA 202..665 565..989 181 22.8 Plus
RhoGAP19D-PD 2206 CG1412-PD 202..665 565..989 181 22.8 Plus
Alh-PF 1165 CG1070-PF 231..593 656..985 179 24.3 Plus
Alh-PP 1717 CG1070-PP 783..1145 656..985 179 24.3 Plus
Crtc-PC 797 CG6064-PC 460..705 685..947 176 27.3 Plus
Crtc-PA 797 CG6064-PA 460..705 685..947 176 27.3 Plus
Crtc-PB 889 CG6064-PB 460..705 685..947 176 27.3 Plus
Mur89F-PC 2158 CG4090-PC 555..743 46..236 176 26.5 Plus
Mur89F-PB 2159 CG4090-PB 555..743 46..236 176 26.5 Plus
Mur89F-PC 2158 CG4090-PC 288..479 36..231 174 25.3 Plus
Mur89F-PB 2159 CG4090-PB 288..479 36..231 174 25.3 Plus
Mur89F-PC 2158 CG4090-PC 557..739 37..216 172 25.7 Plus
Mur89F-PB 2159 CG4090-PB 557..739 37..216 172 25.7 Plus
CG43736-PL 1367 CG43736-PL 393..732 666..993 172 23 Plus
CG43736-PI 1367 CG43736-PI 393..732 666..993 172 23 Plus
ftz-f1-PC 803 CG4059-PC 26..226 802..993 169 27.8 Plus
ftz-f1-PA 803 CG4059-PA 26..226 802..993 169 27.8 Plus
ftz-f1-PD 853 CG4059-PD 26..226 802..993 169 27.8 Plus
Pdp1-PJ 633 CG17888-PJ 9..249 733..954 166 25.7 Plus
Pdp1-PD 647 CG17888-PD 9..249 733..954 166 25.7 Plus
vvl-PF 742 CG10037-PF 376..735 614..958 166 23.3 Plus
ab-PE 899 CG43860-PE 182..378 38..247 166 24.3 Plus
ab-PA 904 CG43860-PA 182..378 38..247 166 24.3 Plus
Med-PC 771 CG1775-PC 201..400 617..846 165 27.3 Plus
Med-PA 771 CG1775-PA 201..400 617..846 165 27.3 Plus
ftz-f1-PB 1027 CG4059-PB 137..322 36..205 164 27.4 Plus
vvl-PC 713 CG10037-PC 376..677 614..913 162 23.6 Plus
vvl-PE 726 CG10037-PE 376..677 614..913 162 23.6 Plus
psq-PN 1043 CG2368-PN 146..396 665..951 161 22.1 Plus
psq-PA 1046 CG2368-PA 146..396 665..951 161 22.1 Plus
psq-PB 1064 CG2368-PB 146..396 665..951 161 22.1 Plus
psq-PC 1064 CG2368-PC 146..396 665..951 161 22.1 Plus
psq-PM 1123 CG2368-PM 146..396 665..951 161 22.1 Plus
CG13560-PB 181 CG13560-PB 28..123 123..216 154 33.3 Plus
CG13560-PA 181 CG13560-PA 28..123 123..216 154 33.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15833-PA 807 GI15833-PA 252..780 222..760 1803 66.1 Plus
Dmoj\GI12386-PA 348 GI12386-PA 1..340 246..589 971 57.5 Plus
Dmoj\GI22217-PA 397 GI22217-PA 9..338 255..585 724 47.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14678-PA 1197 GL14678-PA 251..828 211..771 2178 73.9 Plus
Dper\GL24402-PA 400 GL24402-PA 8..345 254..586 747 47.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10875-PA 1202 GA10875-PA 250..826 211..771 2169 74.7 Plus
Dpse\GA14518-PA 400 GA14518-PA 4..345 250..586 761 46.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21691-PA 1000 GM21691-PA 1..1000 1..1001 5200 97.6 Plus
Dsec\GM17772-PA 403 GM17772-PA 8..344 254..586 790 48.4 Plus
Dsec\GM26647-PA 403 GM26647-PA 8..344 254..586 790 48.4 Plus
Dsec\GM17777-PA 236 GM17777-PA 8..210 254..450 548 55.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21148-PA 403 GD21148-PA 8..344 254..586 792 48.7 Plus
Dsim\GD24770-PA 274 GD24770-PA 55..274 782..1001 461 95 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18687-PA 1111 GJ18687-PA 1..729 1..760 2137 65.1 Plus
Dvir\GJ17879-PA 416 GJ17879-PA 1..386 246..639 1154 59.7 Plus
Dvir\GJ24338-PA 397 GJ24338-PA 9..341 255..588 787 49.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25231-PA 1048 GK25231-PA 235..743 221..756 2091 76.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15792-PA 1014 GE15792-PA 1..1011 1..1001 3340 86.9 Plus
Dyak\GE23533-PA 405 GE23533-PA 8..344 254..585 766 47.2 Plus