BDGP Sequence Production Resources |
Search the DGRC for RE04768
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 47 |
Well: | 68 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10440-RA |
Protein status: | RE04768.pep: gold |
Preliminary Size: | 1416 |
Sequenced Size: | 2364 |
Gene | Date | Evidence |
---|---|---|
CG10440 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10440 | 2002-05-31 | Blastp of sequenced clone |
CG10440 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10440 | 2008-04-29 | Release 5.5 accounting |
CG10440 | 2008-08-15 | Release 5.9 accounting |
CG10440 | 2008-12-18 | 5.12 accounting |
2364 bp (2364 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118359
> RE04768.complete AGTATTCGAGCAACTCTCGACGCGAATGCAAGTGAGGTAAATTGCCAGCG CTCAAAAGTAGGCAACACTTAGGTCTAACGGTGAACGGTGAACAGCGAAC GGTTAACGTTTAACGGTGTGCGTTGTGTACGGCAAGCGGAAACGGAAGTA AACACTCGTTGGCGCGCGCTCATTTGATTGAATTTGAAAGGGTTCAACCG AAAGCGACTAGCGATCAGCAGATCGAAGCACACTGAGAATATCGAAGGTC ACTGAAGATCGGACAAGACGAATATCGTTTATCTACGCGCGCGTTGTATT AAAAAAGAGTTAAAGTGCATTTCCTAAATATACCAACCTTTTTAACTCCG TTTGTTGCATTGGATCAACGATCACCGTTGACGGTGGATTCCTCCTGCCC CAAACGGAAAAAATGCGATATGGACCGAGAGCGCGAAAGAGATGTCAAGG CCCTGGAGCCACGCGACTTATCCTCCACGGGCCGCATTTACGCCAGAAGC GATATTAAAATCAGCTCCTCGCCAACCGTCTCGCCAACGATCTCAAACTC CTCTTCGCCCACACCGACGCCACCCGCCAGTTCCTCAGTGACGCCGCTGG GCTTGCCCGGAGCGGTGGCAGCTGCTGCCGCCGCCGTCGGAGGAGCCTCA TCGGCGGGGGCCAGTTCCTATTTGCACGGCAACCACAAGCCCATCACCGG GATTCCGTGTGTGGCCGCCGCCTCCCGCTATACGGCGCCCGTTCACATCG ACGTGGGCGGGACCATCTACACCAGCTCACTGGAGACGCTCACCAAGTAC CCGGAGTCGAAGCTGGCCAAGCTCTTCAATGGCCAGATACCCATCGTGCT GGACTCGCTGAAGCAGCACTATTTCATCGATCGCGACGGGGGCATGTTCC GCCACATTCTGAACTTTATGAGAAACTCAAGACTTCTGATTGCCGAGGAT TTTCCCGACCTGGAGCTGCTGCTGGAGGAGGCTCGCTACTACGAAGTGGA GCCGATGATTAAGCAGCTGGAAAGCATGCGCAAGGATCGCGTTCGCAATG GCAACTATTTGGTGGCGCCACCCACTCCACCGGCTCGCCACATCAAGACG AGCCCGAGGACCAGCGCATCGCCGGAGTGCAATTACGAGGTAGTGGCGCT GCACATCTCGCCAGACCTTGGCGAACGCATAATGCTGTCGGCAGAACGGG CTCTGCTCGACGAGCTCTTCCCGGAGGCCAGCCAAGCGACACAGTCGAGT CGCAGCGGAGTGTCCTGGAACCAGGGCGACTGGGGGCAAATCATTCGCTT CCCCCTCAACGGCTACTGCAAGCTGAACTCGGTGCAGGTGCTCACCCGAC TCCTCAACGCCGGCTTCACCATCGAGGCCAGCGTTGGGGGCCAGCAGTTC TCCGAGTATCTGCTGGCGCGACGCGTTCCAATGTGATAGGCTCTGGGTAG GGATTCCCCAGCTCCCCAAGAAGCTGCAGATGTGGCCCTGATTCCGTCGG CTTCTGTGGCTTCTGTTTCCGGCTCCGGTTCGGACTCGGGTTCGGGTTCG GCATCGGGCTCTTTGCGACGCGGGCGTCTGATCCATGTGCGTTGCAGGCG CTAATTGATCTGGGTTAGGTGACCCAGAATCGCAGGTGGGGAGAGTGGTC TATGAACAATTCCAAGTGATACAATGTACTGAGAAGGGCAAATGAAAAAT CAAGTGTAACGCCGAATTGTTTATATATCTAACACACTAAAACTCGATCC AACACCGTTTTGGGGACTGCGCATTGCTGCTCTGAGCAGTAAAATACATA ATTTAGAAATACTTGGACACCGTTCGGTGAGGATGCAAGTTCTGAATCTG AATCCAAATGTTATTTAATGTTTATCAATTAAGTTTGCTGGCACGGACAC TGAACGCAAACACGCTCGTGTGTATTATTAAGCATTTACAGAGCCAAGAG CCCAGCACTGATTTTGTTTTTTAGCCTTGATTTTAAGTCGATATTGTTTT CTCTAAGTGTACCACCTAATGCTAAAGACCCTAAGTTGTTTCATTAAATC AAGTTGGCCAGGGATATTAGCTGGCTTAAATTATTGTAACACACACGGAA AACTATGGTAGTATCAACTCACAGCGAAAATAGTTTTGTAGTACTTAATT GATGTAATTGAACCTTTATGAATGTAAACTATGGGATAACTTTTTCAATA TATACGATCCGACGTCTAAATAGTCTACACCAATTCAAATACAATTACAT GCAAATATAGATATATTTAACGAAATACAGTTTGCGACCACGCCCTCTAT AGAACAACCACTCAATTGAATATTTAAATAAAGAAAAAACATACGTGCAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10440.c | 2672 | CG10440.c | 322..2672 | 1..2351 | 11740 | 99.9 | Plus |
CG10440-RA | 2422 | CG10440-RA | 72..2422 | 1..2351 | 11740 | 99.9 | Plus |
CG10440.a | 2108 | CG10440.a | 104..2107 | 344..2347 | 10020 | 100 | Plus |
CG10440.a | 2108 | CG10440.a | 68..103 | 1..36 | 180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17446670..17448014 | 2347..1003 | 6695 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 17448211..17448701 | 1002..512 | 2425 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 17457522..17457864 | 343..1 | 1655 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 17448961..17449069 | 514..406 | 545 | 100 | Minus |
chr2R | 21145070 | chr2R | 17457175..17457238 | 407..344 | 320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21560243..21561591 | 2351..1003 | 6730 | 99.9 | Minus |
2R | 25286936 | 2R | 21561794..21562284 | 1002..512 | 2455 | 100 | Minus |
2R | 25286936 | 2R | 21571110..21571452 | 343..1 | 1715 | 100 | Minus |
2R | 25286936 | 2R | 21562544..21562652 | 514..406 | 545 | 100 | Minus |
2R | 25286936 | 2R | 21570761..21570824 | 407..344 | 320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21561442..21562790 | 2351..1003 | 6730 | 99.9 | Minus |
2R | 25260384 | 2R | 21562993..21563483 | 1002..512 | 2455 | 100 | Minus |
2R | 25260384 | 2R | 21572309..21572651 | 343..1 | 1715 | 100 | Minus |
2R | 25260384 | 2R | 21563743..21563851 | 514..406 | 545 | 100 | Minus |
2R | 25260384 | 2R | 21571960..21572023 | 407..344 | 320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17446669..17448014 | 1003..2348 | 99 | <- | Minus |
chr2R | 17448211..17448698 | 515..1002 | 99 | <- | Minus |
chr2R | 17448961..17449068 | 407..514 | 100 | <- | Minus |
chr2R | 17457176..17457238 | 344..406 | 100 | <- | Minus |
chr2R | 17457522..17457864 | 1..343 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 1..1017 | 420..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 1..1017 | 420..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RB | 12..1104 | 344..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 1..1017 | 420..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RB | 12..1104 | 344..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 1..2347 | 1..2348 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 1..2347 | 1..2348 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 3..2349 | 1..2348 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 1..2347 | 1..2348 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10440-RA | 3..2349 | 1..2348 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21560246..21561591 | 1003..2348 | 99 | <- | Minus |
2R | 21561794..21562281 | 515..1002 | 100 | <- | Minus |
2R | 21562544..21562651 | 407..514 | 100 | <- | Minus |
2R | 21570762..21570824 | 344..406 | 100 | <- | Minus |
2R | 21571110..21571452 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21560246..21561591 | 1003..2348 | 99 | <- | Minus |
2R | 21561794..21562281 | 515..1002 | 100 | <- | Minus |
2R | 21562544..21562651 | 407..514 | 100 | <- | Minus |
2R | 21570762..21570824 | 344..406 | 100 | <- | Minus |
2R | 21571110..21571452 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21560246..21561591 | 1003..2348 | 99 | <- | Minus |
2R | 21561794..21562281 | 515..1002 | 100 | <- | Minus |
2R | 21562544..21562651 | 407..514 | 100 | <- | Minus |
2R | 21570762..21570824 | 344..406 | 100 | <- | Minus |
2R | 21571110..21571452 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17450049..17450156 | 407..514 | 100 | <- | Minus |
arm_2R | 17458267..17458329 | 344..406 | 100 | <- | Minus |
arm_2R | 17447751..17449096 | 1003..2348 | 99 | <- | Minus |
arm_2R | 17449299..17449786 | 515..1002 | 100 | <- | Minus |
arm_2R | 17458615..17458957 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21572309..21572651 | 1..343 | 100 | Minus | |
2R | 21561445..21562790 | 1003..2348 | 99 | <- | Minus |
2R | 21562993..21563480 | 515..1002 | 100 | <- | Minus |
2R | 21563743..21563850 | 407..514 | 100 | <- | Minus |
2R | 21571961..21572023 | 344..406 | 100 | <- | Minus |
Translation from 419 to 1435
> RE04768.hyp MDRERERDVKALEPRDLSSTGRIYARSDIKISSSPTVSPTISNSSSPTPT PPASSSVTPLGLPGAVAAAAAAVGGASSAGASSYLHGNHKPITGIPCVAA ASRYTAPVHIDVGGTIYTSSLETLTKYPESKLAKLFNGQIPIVLDSLKQH YFIDRDGGMFRHILNFMRNSRLLIAEDFPDLELLLEEARYYEVEPMIKQL ESMRKDRVRNGNYLVAPPTPPARHIKTSPRTSASPECNYEVVALHISPDL GERIMLSAERALLDELFPEASQATQSSRSGVSWNQGDWGQIIRFPLNGYC KLNSVQVLTRLLNAGFTIEASVGGQQFSEYLLARRVPM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10440-PA | 338 | CG10440-PA | 1..338 | 1..338 | 1727 | 100 | Plus |
CG10440-PB | 367 | CG10440-PB | 30..367 | 1..338 | 1727 | 100 | Plus |
CG10830-PA | 228 | CG10830-PA | 5..104 | 108..207 | 172 | 38.6 | Plus |
Translation from 419 to 1435
> RE04768.pep MDRERERDVKALEPRDLSSTGRIYARSDIKISSSPTVSPTISNSSSPTPT PPASSSVTPLGLPGAVAAAAAAVGGASSAGASSYLHGNHKPITGIPCVAA ASRYTAPVHIDVGGTIYTSSLETLTKYPESKLAKLFNGQIPIVLDSLKQH YFIDRDGGMFRHILNFMRNSRLLIAEDFPDLELLLEEARYYEVEPMIKQL ESMRKDRVRNGNYLVAPPTPPARHIKTSPRTSASPECNYEVVALHISPDL GERIMLSAERALLDELFPEASQATQSSRSGVSWNQGDWGQIIRFPLNGYC KLNSVQVLTRLLNAGFTIEASVGGQQFSEYLLARRVPM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12090-PA | 343 | GF12090-PA | 1..343 | 1..338 | 1763 | 97.4 | Plus |
Dana\GF17008-PA | 227 | GF17008-PA | 5..100 | 108..207 | 181 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20766-PA | 338 | GG20766-PA | 1..338 | 1..338 | 1788 | 100 | Plus |
Dere\GG15048-PA | 228 | GG15048-PA | 5..104 | 108..207 | 177 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20052-PA | 350 | GH20052-PA | 1..350 | 1..338 | 1580 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
twz-PB | 367 | CG10440-PB | 30..367 | 1..338 | 1727 | 100 | Plus |
twz-PA | 338 | CG10440-PA | 1..338 | 1..338 | 1727 | 100 | Plus |
Ktl-PB | 228 | CG10830-PB | 5..104 | 108..207 | 172 | 38.6 | Plus |
Ktl-PA | 228 | CG10830-PA | 5..104 | 108..207 | 172 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20461-PA | 350 | GI20461-PA | 1..350 | 1..338 | 1584 | 90.6 | Plus |
Dmoj\GI21987-PA | 230 | GI21987-PA | 5..103 | 108..207 | 176 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17486-PA | 342 | GL17486-PA | 1..342 | 1..338 | 1751 | 96.5 | Plus |
Dper\GL23251-PA | 228 | GL23251-PA | 5..104 | 108..207 | 155 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10319-PA | 342 | GA10319-PA | 1..342 | 1..338 | 1751 | 96.5 | Plus |
Dpse\GA10583-PA | 228 | GA10583-PA | 5..104 | 108..207 | 155 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15711-PA | 338 | GM15711-PA | 1..338 | 1..338 | 1788 | 100 | Plus |
Dsec\GM23149-PA | 228 | GM23149-PA | 5..101 | 108..207 | 169 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25187-PA | 338 | GD25187-PA | 1..338 | 1..338 | 1788 | 100 | Plus |
Dsim\GD20024-PA | 228 | GD20024-PA | 5..101 | 108..207 | 169 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22311-PA | 352 | GJ22311-PA | 1..352 | 1..338 | 1582 | 89.8 | Plus |
Dvir\GJ14346-PA | 230 | GJ14346-PA | 5..103 | 108..207 | 164 | 38.8 | Plus |