BDGP Sequence Production Resources |
Search the DGRC for RE04845
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 48 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1941-RA |
Protein status: | RE04845.pep: gold |
Preliminary Size: | 1059 |
Sequenced Size: | 1277 |
Gene | Date | Evidence |
---|---|---|
CG1941 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1941 | 2002-01-03 | Blastp of sequenced clone |
CG1941 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1941 | 2008-04-29 | Release 5.5 accounting |
CG1941 | 2008-08-15 | Release 5.9 accounting |
CG1941 | 2008-12-18 | 5.12 accounting |
1277 bp (1277 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075443
> RE04845.complete AGTTAAATGTTGTACGCTCGCATCGTCGGTTCTGCTGCTCAAACGCGATA ACGATCCATTACTCGCCGGAGGACCGTGCTACCAAGTAGTTCAACTTTCC GAGTTCGAGAGCTCTGACATCATGAAAATCGAGTGGGCTCCCAAAGGAGT TCCCATGGAACGGCGTCGCCAGACGTTTGCCATGGCCTTCCTAATCCTAT CCTTTATGATACTCTCCTTTGGATCCTATTTCTTCGTTGCTGCCGTGCTG TTCTATGGAAGCCTTTTGTGGCGCACCATTATGGTCATCTATTTGGTCTA CGTCTACGCGAATCACAAGAGAACCCACTCCATTATGGATGGCAATGGCT GGAAAATTAACCGCAACAATTGGCTGTTTCGGCATTATCGGGACTACTTT CCCGTACAGCTGGTCAAGACCGCAGAGCTGCCGCCGAATAAGAACTACAT TTTGGCCAGTTTTCCGCACGGAATTTTGGGGACTGGCATTTCCATTAATA TGGGTCTAGACATCTCCAAGTGGCTGCAACTGTTCCCACAGGTGAGGCCC AAGGTGGCCACTTTGGATCAAAACTTCCTGACGCCCATCGTGCGTGGTCT CCTGAGATCTTGGGGCCTGGTGTCGGTTTCCAAGGAGGCCTTAGTATATC TGCTGACCAAATCAAACGATCCCAAGCACAAGGACAATCGTGATGGGTTC ACCTCCAACGCGGTGGCTATTCTGGTGGGTGGTGCCCAGGAGGCACTAGA CTCGCACCCTGGCAAATATATATTGACACTGAAGAACCGCAAGGGATTCG TTAAAATGGCCATTAGGACAGGGTCTTCGATTGTTCCCACGTTTTCCTTT GGCGAGGTGGACATTCTGGATCAGGTTGCCAATCCACCGAACTCTCGGGT TCGTCGCTTTCAAGACTTTGTAAAGAGGATAACGGGGATATCTCCGCTGA TTCCCGTTGGCCGGGGCATCTTCAACTACTCCTTTGGCTTTCTGCCCAAC CGTCGACGCATTGTCCAAGTTGTTGGCGCTCCCATCGACGTGGTTCAGAG CGATCAACCAGACGCAGCCTATGTGGATAAGATACACAAACAGGTTATTG ACGACCTGGAGAAGATGTTCGCCAAGTACAAGGATCAGTACATACCGAAC TCCAAGCAGGACAAGCTGATTATACACTAGTCGAGAAGTTATTGTCTAAA CAATGTGATCAAATGAGTGCTTTATAAGCATTTAATATAAAAATTACGAA TTTTATCAGGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3598392..3598736 | 480..824 | 1710 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 3599060..3599299 | 1022..1261 | 1200 | 100 | Plus |
chr2R | 21145070 | chr2R | 3598794..3598994 | 822..1022 | 1005 | 100 | Plus |
chr2R | 21145070 | chr2R | 3597775..3597962 | 63..250 | 940 | 100 | Plus |
chr2R | 21145070 | chr2R | 3598166..3598299 | 348..481 | 670 | 100 | Plus |
chr2R | 21145070 | chr2R | 3598013..3598111 | 250..348 | 495 | 100 | Plus |
chr2R | 21145070 | chr2R | 3600627..3600966 | 485..824 | 455 | 75.6 | Plus |
chr2R | 21145070 | chr2R | 3601026..3601221 | 827..1022 | 440 | 81.6 | Plus |
chr2R | 21145070 | chr2R | 3597192..3597253 | 1..62 | 310 | 100 | Plus |
chr2R | 21145070 | chr2R | 3603198..3603526 | 482..810 | 310 | 72.9 | Plus |
chr2R | 21145070 | chr2R | 3603601..3603796 | 827..1022 | 260 | 75.5 | Plus |
chr2R | 21145070 | chr2R | 3600455..3600557 | 379..481 | 230 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7711074..7711418 | 480..824 | 1710 | 99.7 | Plus |
2R | 25286936 | 2R | 7711742..7711989 | 1022..1269 | 1225 | 99.6 | Plus |
2R | 25286936 | 2R | 7711476..7711676 | 822..1022 | 1005 | 100 | Plus |
2R | 25286936 | 2R | 7710457..7710644 | 63..250 | 940 | 100 | Plus |
2R | 25286936 | 2R | 7710848..7710981 | 348..481 | 670 | 100 | Plus |
2R | 25286936 | 2R | 7710695..7710793 | 250..348 | 495 | 100 | Plus |
2R | 25286936 | 2R | 7713309..7713648 | 485..824 | 440 | 75.3 | Plus |
2R | 25286936 | 2R | 7713708..7713903 | 827..1022 | 425 | 81.1 | Plus |
2R | 25286936 | 2R | 7709874..7709935 | 1..62 | 310 | 100 | Plus |
2R | 25286936 | 2R | 7715880..7716208 | 482..810 | 295 | 72.6 | Plus |
2R | 25286936 | 2R | 7716283..7716478 | 827..1022 | 260 | 75.5 | Plus |
2R | 25286936 | 2R | 7713137..7713239 | 379..481 | 230 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7712273..7712617 | 480..824 | 1710 | 99.7 | Plus |
2R | 25260384 | 2R | 7712941..7713188 | 1022..1269 | 1225 | 99.5 | Plus |
2R | 25260384 | 2R | 7712675..7712875 | 822..1022 | 1005 | 100 | Plus |
2R | 25260384 | 2R | 7711656..7711843 | 63..250 | 940 | 100 | Plus |
2R | 25260384 | 2R | 7712047..7712180 | 348..481 | 670 | 100 | Plus |
2R | 25260384 | 2R | 7711894..7711992 | 250..348 | 495 | 100 | Plus |
2R | 25260384 | 2R | 7714907..7715102 | 827..1022 | 425 | 81.1 | Plus |
2R | 25260384 | 2R | 7714674..7714847 | 651..824 | 345 | 79.8 | Plus |
2R | 25260384 | 2R | 7711073..7711134 | 1..62 | 310 | 100 | Plus |
2R | 25260384 | 2R | 7714336..7714438 | 379..481 | 230 | 81.5 | Plus |
2R | 25260384 | 2R | 7717482..7717549 | 827..894 | 190 | 85.2 | Plus |
2R | 25260384 | 2R | 7714508..7714593 | 485..570 | 160 | 79 | Plus |
2R | 25260384 | 2R | 7715161..7715280 | 1022..1141 | 150 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3599061..3599299 | 1023..1261 | 100 | Plus | |
chr2R | 3598393..3598734 | 481..822 | 99 | -> | Plus |
chr2R | 3597192..3597253 | 1..62 | 100 | -> | Plus |
chr2R | 3597775..3597962 | 63..250 | 100 | -> | Plus |
chr2R | 3598014..3598111 | 251..348 | 100 | -> | Plus |
chr2R | 3598167..3598298 | 349..480 | 100 | -> | Plus |
chr2R | 3598795..3598994 | 823..1022 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 1..1059 | 122..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 1..1059 | 122..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RB | 1..1059 | 122..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 1..1059 | 122..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RB | 1..1059 | 122..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 1..1261 | 1..1261 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 1..1261 | 1..1261 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 2..1262 | 1..1261 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 1..1261 | 1..1261 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1941-RA | 2..1262 | 1..1261 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7709874..7709935 | 1..62 | 100 | -> | Plus |
2R | 7710457..7710644 | 63..250 | 100 | -> | Plus |
2R | 7710696..7710793 | 251..348 | 100 | -> | Plus |
2R | 7710849..7710980 | 349..480 | 100 | -> | Plus |
2R | 7711075..7711416 | 481..822 | 99 | -> | Plus |
2R | 7711477..7711676 | 823..1022 | 100 | -> | Plus |
2R | 7711743..7711981 | 1023..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7709874..7709935 | 1..62 | 100 | -> | Plus |
2R | 7710457..7710644 | 63..250 | 100 | -> | Plus |
2R | 7710696..7710793 | 251..348 | 100 | -> | Plus |
2R | 7710849..7710980 | 349..480 | 100 | -> | Plus |
2R | 7711075..7711416 | 481..822 | 99 | -> | Plus |
2R | 7711477..7711676 | 823..1022 | 100 | -> | Plus |
2R | 7711743..7711981 | 1023..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7709874..7709935 | 1..62 | 100 | -> | Plus |
2R | 7710457..7710644 | 63..250 | 100 | -> | Plus |
2R | 7710696..7710793 | 251..348 | 100 | -> | Plus |
2R | 7710849..7710980 | 349..480 | 100 | -> | Plus |
2R | 7711075..7711416 | 481..822 | 99 | -> | Plus |
2R | 7711477..7711676 | 823..1022 | 100 | -> | Plus |
2R | 7711743..7711981 | 1023..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3598201..3598298 | 251..348 | 100 | -> | Plus |
arm_2R | 3598354..3598485 | 349..480 | 100 | -> | Plus |
arm_2R | 3597379..3597440 | 1..62 | 100 | -> | Plus |
arm_2R | 3597962..3598149 | 63..250 | 100 | -> | Plus |
arm_2R | 3598580..3598921 | 481..822 | 99 | -> | Plus |
arm_2R | 3598982..3599181 | 823..1022 | 100 | -> | Plus |
arm_2R | 3599248..3599486 | 1023..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7712274..7712615 | 481..822 | 99 | -> | Plus |
2R | 7712676..7712875 | 823..1022 | 100 | -> | Plus |
2R | 7712942..7713180 | 1023..1261 | 100 | Plus | |
2R | 7711073..7711134 | 1..62 | 100 | -> | Plus |
2R | 7711656..7711843 | 63..250 | 100 | -> | Plus |
2R | 7711895..7711992 | 251..348 | 100 | -> | Plus |
2R | 7712048..7712179 | 349..480 | 100 | -> | Plus |
Translation from 0 to 1179
> RE04845.hyp VKCCTLASSVLLLKRDNDPLLAGGPCYQVVQLSEFESSDIMKIEWAPKGV PMERRRQTFAMAFLILSFMILSFGSYFFVAAVLFYGSLLWRTIMVIYLVY VYANHKRTHSIMDGNGWKINRNNWLFRHYRDYFPVQLVKTAELPPNKNYI LASFPHGILGTGISINMGLDISKWLQLFPQVRPKVATLDQNFLTPIVRGL LRSWGLVSVSKEALVYLLTKSNDPKHKDNRDGFTSNAVAILVGGAQEALD SHPGKYILTLKNRKGFVKMAIRTGSSIVPTFSFGEVDILDQVANPPNSRV RRFQDFVKRITGISPLIPVGRGIFNYSFGFLPNRRRIVQVVGAPIDVVQS DQPDAAYVDKIHKQVIDDLEKMFAKYKDQYIPNSKQDKLIIH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1941-PD | 352 | CG1941-PD | 1..352 | 41..392 | 1837 | 100 | Plus |
CG1941-PC | 352 | CG1941-PC | 1..352 | 41..392 | 1837 | 100 | Plus |
CG1941-PB | 352 | CG1941-PB | 1..352 | 41..392 | 1837 | 100 | Plus |
CG1941-PA | 352 | CG1941-PA | 1..352 | 41..392 | 1837 | 100 | Plus |
CG1942-PA | 352 | CG1942-PA | 1..352 | 41..392 | 1376 | 73 | Plus |
Translation from 121 to 1179
> RE04845.pep MKIEWAPKGVPMERRRQTFAMAFLILSFMILSFGSYFFVAAVLFYGSLLW RTIMVIYLVYVYANHKRTHSIMDGNGWKINRNNWLFRHYRDYFPVQLVKT AELPPNKNYILASFPHGILGTGISINMGLDISKWLQLFPQVRPKVATLDQ NFLTPIVRGLLRSWGLVSVSKEALVYLLTKSNDPKHKDNRDGFTSNAVAI LVGGAQEALDSHPGKYILTLKNRKGFVKMAIRTGSSIVPTFSFGEVDILD QVANPPNSRVRRFQDFVKRITGISPLIPVGRGIFNYSFGFLPNRRRIVQV VGAPIDVVQSDQPDAAYVDKIHKQVIDDLEKMFAKYKDQYIPNSKQDKLI IH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13197-PA | 352 | GF13197-PA | 1..352 | 1..352 | 1642 | 85.8 | Plus |
Dana\GF13198-PA | 352 | GF13198-PA | 1..352 | 1..352 | 1293 | 69.9 | Plus |
Dana\GF13199-PA | 351 | GF13199-PA | 1..351 | 1..352 | 1251 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23298-PA | 352 | GG23298-PA | 1..352 | 1..352 | 1796 | 96.3 | Plus |
Dere\GG23299-PA | 352 | GG23299-PA | 1..352 | 1..352 | 1403 | 72.7 | Plus |
Dere\GG23300-PA | 349 | GG23300-PA | 1..349 | 1..352 | 1267 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20316-PA | 352 | GH20316-PA | 1..352 | 1..352 | 1320 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1941-PD | 352 | CG1941-PD | 1..352 | 1..352 | 1837 | 100 | Plus |
CG1941-PC | 352 | CG1941-PC | 1..352 | 1..352 | 1837 | 100 | Plus |
CG1941-PB | 352 | CG1941-PB | 1..352 | 1..352 | 1837 | 100 | Plus |
CG1941-PA | 352 | CG1941-PA | 1..352 | 1..352 | 1837 | 100 | Plus |
Dgat2-PA | 352 | CG1942-PA | 1..352 | 1..352 | 1376 | 73 | Plus |
CG1946-PA | 349 | CG1946-PA | 1..348 | 1..351 | 1254 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19988-PA | 352 | GI19988-PA | 1..352 | 1..352 | 1142 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10526-PA | 352 | GL10526-PA | 1..352 | 1..352 | 1441 | 73.9 | Plus |
Dper\GL10527-PA | 352 | GL10527-PA | 1..352 | 1..352 | 1421 | 74.7 | Plus |
Dper\GL10836-PA | 352 | GL10836-PA | 1..352 | 1..352 | 1407 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15143-PA | 352 | GA15143-PA | 1..352 | 1..352 | 1435 | 73.6 | Plus |
Dpse\GA24395-PA | 352 | GA24395-PA | 1..352 | 1..352 | 1425 | 74.7 | Plus |
Dpse\GA15142-PA | 352 | GA15142-PA | 1..352 | 1..352 | 1403 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20976-PA | 352 | GM20976-PA | 1..352 | 1..352 | 1821 | 97.2 | Plus |
Dsec\GM20977-PA | 352 | GM20977-PA | 1..352 | 1..352 | 1404 | 72.4 | Plus |
Dsec\GM20978-PA | 349 | GM20978-PA | 1..349 | 1..352 | 1274 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10504-PA | 352 | GD10504-PA | 1..352 | 1..352 | 1818 | 97.4 | Plus |
Dsim\GD10505-PA | 352 | GD10505-PA | 1..352 | 1..352 | 1408 | 73 | Plus |
Dsim\GD15355-PA | 349 | GD15355-PA | 1..349 | 1..352 | 1278 | 67.6 | Plus |
Dsim\GD10506-PA | 349 | GD10506-PA | 1..349 | 1..352 | 1272 | 67 | Plus |
Dsim\GD15354-PA | 253 | GD15354-PA | 1..251 | 1..261 | 948 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21238-PA | 352 | GJ21238-PA | 1..352 | 1..352 | 1377 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21715-PA | 352 | GK21715-PA | 1..352 | 1..352 | 1381 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19144-PA | 352 | GE19144-PA | 1..352 | 1..352 | 1822 | 98 | Plus |
Dyak\GE19145-PA | 352 | GE19145-PA | 1..352 | 1..352 | 1419 | 73.9 | Plus |
Dyak\GE19146-PA | 349 | GE19146-PA | 1..349 | 1..352 | 1270 | 68.2 | Plus |