BDGP Sequence Production Resources |
Search the DGRC for RE05022
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 50 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL7A-RA |
Protein status: | RE05022.pep: gold |
Preliminary Size: | 1015 |
Sequenced Size: | 1077 |
Gene | Date | Evidence |
---|---|---|
CG3314 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3314 | 2002-02-22 | Blastp of sequenced clone |
CG3314 | 2003-01-01 | Sim4 clustering to Release 3 |
RpL7A | 2008-04-29 | Release 5.5 accounting |
RpL7A | 2008-08-15 | Release 5.9 accounting |
RpL7A | 2008-12-18 | 5.12 accounting |
1077 bp (1077 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089570
> RE05022.complete ACTCGATTTCCAACATTGGAACTGCCACTTCCTTTCTTTTTCGTTCCACG TTTCCGCGAGTATTTCGATACGTTCGTGGTCGTGCTTATCACAGCAACTG CTTATTTCGGTAGCAAACTTTAAAACCGCTTGAAAATGGTTGTCAAGAAG CCCAGGCCAAAGAAGAAGCCAGTGACCAAGAAGGTGGCTCCCGCTCCTCT GGCTGTCAAGAAGCCCGTGGTCAAGAAGGTTGTTAACCAGCTGTTCGAGA AGCGTCCCAAGAACTTCGGAATCGGCCAGAATGTGCAGCCCAAGCGCGAT CTGTCCCGTTTCGTTCGCTGGCCCAAATACATCCGGGTGCAGCGTCAAAA GGCTGTGCTCCAGAAGCGCCTGAAGGTCCCACCACCAATCCACCAGTTCA GCCAGACTCTGGACAAGACCACCGCCGTGAAGCTGTTCAAGCTGCTGGAG AAGTACCGCCCCGAGTCGCCGCTGGCCAAGAAGCTGCGCCTGAAGAAGAT CGCCGAGGCTAAGGCCAAGGGCAAGGATGTGGAGCCCAAGAAGAAGCCCA GCTATGTGTCCGCCGGTACCAACACGGTGACCAAGCTGATCGAGCAGAAG AAGGCCCAACTGGTGGTCATTGCCCACGATGTTGATCCTCTGGAGCTGGT GCTCTTCCTGCCCGCCCTGTGCCGCAAGATGGGCGTGCCCTACTGCATTG TGAAGGGTAAGGCTCGTCTGGGTCGCCTGGTGCGTCGCAAGACCTGCACC ACCCTCGCCCTGACCACCGTCGATAACAACGACAAGGCCAACTTCGGCAA GGTCCTGGAGGCTGTGAAGACCAACTTCAACGAGCGCCACGAGGAGATCC GTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATC TCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTG ATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACA TGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACT TTTAAGTGTACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL7A-RA | 1331 | RpL7A-RA | 29..1091 | 1..1063 | 5315 | 100 | Plus |
RpL7A-RD | 1398 | RpL7A-RD | 146..1158 | 51..1063 | 5050 | 99.9 | Plus |
RpL7A-RD | 1398 | RpL7A-RD | 28..83 | 1..56 | 280 | 100 | Plus |
RpL17-RB | 912 | RpL17-RB | 36..91 | 1..56 | 205 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6423275..6423692 | 1061..644 | 2060 | 99.5 | Minus |
chrX | 22417052 | chrX | 6424094..6424465 | 645..274 | 1860 | 100 | Minus |
chrX | 22417052 | chrX | 6424557..6424683 | 275..149 | 635 | 100 | Minus |
chrX | 22417052 | chrX | 6424750..6424807 | 150..93 | 290 | 100 | Minus |
chrX | 22417052 | chrX | 6425488..6425543 | 56..1 | 265 | 98.2 | Minus |
chrX | 22417052 | chrX | 6425382..6425425 | 94..51 | 205 | 97.7 | Minus |
chrX | 22417052 | chrX | 6636332..6636387 | 56..1 | 190 | 89.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6531014..6531433 | 1063..644 | 2100 | 100 | Minus |
X | 23542271 | X | 6531835..6532206 | 645..274 | 1860 | 100 | Minus |
X | 23542271 | X | 6532297..6532423 | 275..149 | 635 | 100 | Minus |
X | 23542271 | X | 6532490..6532547 | 150..93 | 290 | 100 | Minus |
X | 23542271 | X | 6533230..6533285 | 56..1 | 280 | 100 | Minus |
X | 23542271 | X | 6533124..6533167 | 94..51 | 205 | 97.7 | Minus |
X | 23542271 | X | 6744196..6744251 | 56..1 | 205 | 91.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6539112..6539531 | 1063..644 | 2100 | 100 | Minus |
X | 23527363 | X | 6539933..6540304 | 645..274 | 1860 | 100 | Minus |
X | 23527363 | X | 6540395..6540521 | 275..149 | 635 | 100 | Minus |
X | 23527363 | X | 6540588..6540645 | 150..93 | 290 | 100 | Minus |
X | 23527363 | X | 6541328..6541383 | 56..1 | 280 | 100 | Minus |
X | 23527363 | X | 6541222..6541265 | 94..51 | 205 | 97.7 | Minus |
X | 23527363 | X | 6752294..6752349 | 56..1 | 205 | 91 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6423275..6423690 | 646..1061 | 99 | <- | Minus |
chrX | 6424094..6424464 | 275..645 | 100 | <- | Minus |
chrX | 6424558..6424681 | 151..274 | 100 | <- | Minus |
chrX | 6424750..6424805 | 95..150 | 100 | <- | Minus |
chrX | 6425382..6425419 | 57..94 | 100 | <- | Minus |
chrX | 6425488..6425543 | 1..56 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RC | 1..816 | 136..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RD | 1..816 | 136..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RD | 1..816 | 136..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RC | 1..816 | 136..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RE | 1..816 | 136..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RA | 1..1061 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RA | 1..1061 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RA | 1..1032 | 30..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RA | 1..1061 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7A-RA | 64..1124 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6532298..6532421 | 151..274 | 100 | <- | Minus |
X | 6532490..6532545 | 95..150 | 100 | <- | Minus |
X | 6533124..6533161 | 57..94 | 100 | <- | Minus |
X | 6533230..6533285 | 1..56 | 100 | Minus | |
X | 6531016..6531431 | 646..1061 | 100 | <- | Minus |
X | 6531835..6532205 | 275..645 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6532298..6532421 | 151..274 | 100 | <- | Minus |
X | 6532490..6532545 | 95..150 | 100 | <- | Minus |
X | 6533124..6533161 | 57..94 | 100 | <- | Minus |
X | 6533230..6533285 | 1..56 | 100 | Minus | |
X | 6531016..6531431 | 646..1061 | 100 | <- | Minus |
X | 6531835..6532205 | 275..645 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6532298..6532421 | 151..274 | 100 | <- | Minus |
X | 6532490..6532545 | 95..150 | 100 | <- | Minus |
X | 6533124..6533161 | 57..94 | 100 | <- | Minus |
X | 6533230..6533285 | 1..56 | 100 | Minus | |
X | 6531016..6531431 | 646..1061 | 100 | <- | Minus |
X | 6531835..6532205 | 275..645 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6425049..6425464 | 646..1061 | 100 | <- | Minus |
arm_X | 6425868..6426238 | 275..645 | 100 | <- | Minus |
arm_X | 6426331..6426454 | 151..274 | 100 | <- | Minus |
arm_X | 6426523..6426578 | 95..150 | 100 | <- | Minus |
arm_X | 6427157..6427194 | 57..94 | 100 | <- | Minus |
arm_X | 6427263..6427318 | 1..56 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6539114..6539529 | 646..1061 | 100 | <- | Minus |
X | 6539933..6540303 | 275..645 | 100 | <- | Minus |
X | 6540396..6540519 | 151..274 | 100 | <- | Minus |
X | 6540588..6540643 | 95..150 | 100 | <- | Minus |
X | 6541222..6541259 | 57..94 | 100 | <- | Minus |
X | 6541328..6541383 | 1..56 | 100 | Minus |
Translation from 135 to 950
> RE05022.pep MVVKKPRPKKKPVTKKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNV QPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL FKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTK LIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVR RKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSK SLARISKLERAKARELAQKQG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21901-PA | 271 | GF21901-PA | 1..271 | 1..271 | 1379 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17670-PA | 271 | GG17670-PA | 1..271 | 1..271 | 1384 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12036-PA | 271 | GH12036-PA | 18..271 | 18..271 | 1195 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL7A-PG | 271 | CG3314-PG | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PF | 271 | CG3314-PF | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PE | 271 | CG3314-PE | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PD | 271 | CG3314-PD | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PA | 271 | CG3314-PA | 1..271 | 1..271 | 1379 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16190-PA | 271 | GI16190-PA | 1..271 | 1..271 | 1350 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14313-PA | 271 | GL14313-PA | 1..271 | 1..271 | 1362 | 97.4 | Plus |
Dper\GL18200-PA | 583 | GL18200-PA | 397..583 | 84..271 | 920 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17314-PA | 271 | GA17314-PA | 1..271 | 1..271 | 1358 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12569-PA | 271 | GM12569-PA | 1..271 | 1..271 | 1377 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16190-PA | 271 | GD16190-PA | 1..271 | 1..271 | 1390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16679-PA | 271 | GJ16679-PA | 1..271 | 1..271 | 1351 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19722-PA | 271 | GK19722-PA | 1..271 | 1..271 | 1354 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpL7A-PA | 271 | GE16459-PA | 1..271 | 1..271 | 1390 | 100 | Plus |
Translation from 135 to 950
> RE05022.hyp MVVKKPRPKKKPVTKKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNV QPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL FKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTK LIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVR RKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSK SLARISKLERAKARELAQKQG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL7A-PG | 271 | CG3314-PG | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PF | 271 | CG3314-PF | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PE | 271 | CG3314-PE | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PD | 271 | CG3314-PD | 1..271 | 1..271 | 1379 | 100 | Plus |
RpL7A-PA | 271 | CG3314-PA | 1..271 | 1..271 | 1379 | 100 | Plus |