Clone RE05272 Report

Gene	Date	Evidence
CG12658	2002-01-01	Sim4 clustering to Release 2
CG32717	2003-08-11	Blastp of sequenced clone
sdt	2008-04-29	Release 5.5 accounting
sdt	2008-08-15	Release 5.9 accounting
sdt	2008-12-18	5.12 accounting

Clone Sequence Records

RE05272.complete Sequence

4496 bp (4496 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010281

> RE05272.complete
AGTTTCAGTTGCGAGGCGACCGTCGACGTTTCCGTAGCGTCAGCGCCGCA
GTGTCGCCGCTTTGACCGTATTGCCCCCAAGTATCGCCGTCTCGTTCCCA
CCGGCGGACTGCGTTCTCGTTTTCGGTGTTTCGGTTATCCGCCTTTTGTT
TTGAAGTGCGCGCACGCGTTGGCGTCTCGTTTTTGGTACGTGGTTTGCAA
TCGTTTCGTTCTTTTTTTTTCGGTGTAACAAATTTGGTTTGTTGTTGTTT
TATTGTGGTGCAGCAGCAGCGGCAGCAGCAGAAAAAGCAGCAGCAGCGCA
GCAGGCCTGGGACATTGGCAACTCGGTGCAGGACGCCTTCGTCATCGCCG
TCGAGGAGCACGCCCGCGAACGTCTGCAGAGATTGGCGGCCTTGAACCGG
GTCACGCCCGTCGACATCACCCAGCTGTCCAAGAAGTTACTAGAAGACGT
CATAGTCCATCAAGCCAGTGATGTGCATTCATACAGCACGAGTGCATCAG
CAGCAGCGATCGCCAGCAGCAGCAACAGATCACAGCAACAGCAACAGCAG
CAGCAGCAGCATCAGTTGCTGAGTGCCGCCTACGAGTTGCAGCAACAGCA
GCAATTGCAACTTCAGCAGCAGCAGCAGCAACAGAACAGTCCCACAAGTA
GCATATCAATTGGAAGAACTGAACTTTTACTGGGCGATCAGAGTTTGCGG
CAGGATCCCAGAGGGAATCGCCGGCGCTCCGGATCGAGCATTGTTGTGCT
GGATGGCGACGATTTGAAGCCATGTCTGCCGGATGACTACATAAGCGGTC
AGCATCATTTGAACCACCAGCAGCAGCTGCAACTGCAGCAGCAGCTGCAG
CAGCAACATCCGCTCCAGCAGCAACACTATCGCACGCACTCGGGCGACAT
CAGGGAGATTGACCAGGAAATGTTGACCATGTTGTCCGTGAACCAAGATA
ACGGTCCACACCGTGAGATGGCCGTCGATTGTCCGGACACGTTCATCGCA
CGCAACAAGACGCCACCCCGATATCCGCCACCCCGTCCACCACAGCTCAA
TGGGAATGCGAAGCCCGTACCGCCGCCACGTGATCATCTGCGGGTGGAGA
AGGATGGTCGGCTGGTCAATTGCTCACCCGCACCACAGCTGCCGGATCGC
AGGGCGCCGGGAAATGCGAGCAGCGGCAGCAGCGGCGCCACAACGCATCC
GCTGCAGCATCAGCAGATCGCCCAGATTGTTGAGCCCACATTGGAGCAGC
TGGACAGCATCAAGAAATACCAGGAGCAACTGCGCCGACGACGCGAGGAG
GAGGAGCGCATAGCGCAGCAAAATGAATTCCTGCGGAACAGTCTTCGTGG
CTCCAGGAAGCTGAAGGCGCTTCAGGATACGGCTACGCCCGGTAAAGCGG
TTGCCCAGCAGCAGCAGCAGGCAACGCTGGCCACCCAGGTGGTTGGCGTG
GAGAATGAGGCATATCTGCCCGACGAAGACCAGCCGCAGGCGGAACAGAT
CGATGGCTATGGCGAACTGATAGCGGCCCTTACCCGCCTGCAAAACCAGC
TGAGCAAGAGCGGACTGAGCACGCTGGCGGGTCGCGTTTCGGCCGCCCAC
AGTGTCCTGGCCAGCGCCAGTGTGGCCCATGTCCTGGCCGCTCGCACCGC
AGTACTGCAGCGACGACGTTCCCGCGTCTCTGGTCCACTGCATCACAGTT
CCCTCGGATTGCAGAAGGACATTGTGGAGCTGCTAACGCAATCGAATACG
GCGGCGGCCATCGAGCTGGGCAACCTGCTGACCAGCCATGAAATGGAGGG
TCTGCTACTGGCCCACGATCGCATTGCCAATCACACGGATGGCACGCCCT
CGCCAACGCCCACGCCCACTCCGGCAATTGGAGCGGCGACGGGATCGACA
CTCAGCAGTCCGGTGGCTGGACCCAAGAGAAATCTAGGTATGGTGGTGCC
ACCGCCCGTGGTACCACCGCCACTGGCGCAACGCGGAGCAATGCCACTGC
CTCGCGGGGAGTCGCCACCGCCGGTTCCCATGCCACCACTGGCTACAATG
CCCATGTCCATGCCCGTTAATCTGCCGATGAGTGCGTGCTTTGGCACGCT
AAACGATCAGAACGACAACATTCGTATCATCCAGATCGAGAAGTCAACGG
AGCCGCTGGGCGCCACAGTGCGCAACGAGGGTGAGGCGGTGGTCATCGGT
AGGATTGTGCGTGGTGGAGCGGCGGAGAAGTCGGGACTGTTGCACGAAGG
TGATGAGATACTGGAGGTCAACGGTCAGGAGTTGCGTGGCAAGACGGTGA
ACGAAGTGTGCGCCCTGTTGGGCGCCATGCAAGGCACCCTGACCTTCCTG
ATCGTCCCAGCGGGTAGTCCACCGTCCGTCGGCGTGATGGGCGGAACAAC
GGGCAGTCAACTGGCCGGGTTGGGTGGAGCACATCGTGACACCGCCGTGT
TGCACGTACGGGCGCATTTCGACTACGATCCAGAGGACGATCTGTATATA
CCCTGCCGGGAGCTGGGCATCAGCTTCCAGAAGGGCGATGTACTGCACGT
GATTAGCCGCGAGGATCCCAACTGGTGGCAGGCGTATCGCGAGGGCGAGG
AGGACCAGACGCTGGCCGGTCTTATTCCTAGTCAGTCGTTCCAGCATCAG
CGCGAGACCATGAAGCTGGCCATTGCGGAGGAGGCGGGTCTGGCGCGATC
CCGCGGTAAGGACGGATCGGGCAGCAAAGGAGCCACGCTCCTGTGTGCGC
GCAAGGGTCGCAAAAAGAAGAAGAAGGCCAGCTCCGAGGCGGGATATCCT
TTATACGCCACCACGGCGCCGGATGAAACGGATCCGGAGGAGATACTCAC
CTACGAGGAGGTGGCCTTGTACTATCCCCGCGCTACCCACAAGCGGCCCA
TCGTCCTCATCGGCCCGCCCAACATTGGAAGACATGAGTTGCGCCAACGT
CTGATGGCCGACTCGGAGCGTTTCTCCGCCGCAGTGCCACACACATCACG
AGCCCGCAGGGAGGGCGAAGTGCCCGGAGTGGACTACCACTTCATCACGC
GACAGGCCTTTGAGGCGGATATTTTGGCGCGCCGCTTTGTGGAGCACGGT
GAATATGAGAAGGCCTACTACGGCACATCACTGGAGGCCATACGCACGGT
GGTGGCCAGCGGCAAGATCTGTGTGCTCAACCTGCATCCGCAGAGCCTTA
AGCTGCTGCGCGCCTCTGACCTCAAGCCGTACGTGGTGCTGGTGGCGCCG
CCCAGCTTGGACAAGCTGCGCCAAAAGAAGCTGCGCAACGGCGAACCCTT
CAAGGAGGAAGAGCTCAAAGACATCATTGCCACGGCCAGGGATATGGAGG
CCCGTTGGGGTCACCTATTCGACATGATCATAATCAACAACGACACGGAG
CGCGCCTACCACCAACTGCTGGCCGAGATCAACTCGCTGGAACGCGAGCC
CCAATGGGTGCCCGCCCAGTGGGTGCACAACAATCGCGACGAGTCATAAT
GGGTTCTAAAGCACCCGCAACCACCACACTACCATCTTCCCTAGGATCCA
TCAACACCCAAGAAATGAATAGCAAACCCAAACTCTTTGTAAATACAATT
TTCAATTGAGCCATGAAGCGGAGAGCAGGATCGATTCCAGTCCAGTAGTT
CGGTTTGCCTGCCGATGCGATTAATCCCAACCCCTCCAATATTATATATA
AATATATATATATTTATACTATTCGTTGCATATGTGCATTTTAGTCTTAG
AGAGAGATCGAGTTTTAATTGTGTGTACTCCTGTTTTAAAAGCATTCCAA
CCTCTTTATGTATGTTCACAAAATTTGTTGTTCGATTAATCGATTTCGGG
AATGCCACAGAGGAAATGGTGATGCTGAAATCAGTGATTTCAAAAACCAT
ATTGCTTCTTGTGGCACTTCCGTTTTCCTCTTTTTTTTTACCACTACCAC
TAACTTATATACTGTAAAAGAATGTTTTTTTTTTTTTTGTATTTAAATTA
AGCTTGGACACTTCCTTAATTTCAAAGGGCAAATTGAAATTGTAAAATAA
CGAATCAGCAAAGGAAGGCCAGAATCGATATGATAGTACCCCTAGTACCC
AATAAAATGTGTAATAATACCCATAAGCGACTCCGAATGTTAACAGAGCC
AGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGATCCGTCGGATATA
GATTCATATTCATCTTCAGATTCAAATTCAAAAGCAGAATCAGAAACATA
CAGAGAAACCGAATCAGAAGCGCAGATACAGATGCAGATGCAAGTGTTGC
AATTACGTAATCTATTTACTTTATAAAATATATACTATACGGATATACAT
ACACATAAATTATAAATCGAAGCGTACTTAATACAATTAATTTTTAACAA
AACGAATGCAAGAGCAAAGTGAAAACTAAGAAATAAAACCGTTCATAAGA
GAGAAACAACAAAATCAGTAAGTCATTGCCAAAAAAAAAAAAAAAA

RE05272.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:37:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
sdt-RB	5822	sdt-RB	2359..5809	1044..4494	17255	100	Plus
sdt.u	6837	sdt.u	2359..5809	1044..4494	17255	100	Plus
sdt.n	6522	sdt.n	2359..5809	1044..4494	17255	100	Plus
sdt-RB	5822	sdt-RB	17..1061	1..1045	5225	100	Plus
sdt.u	6837	sdt.u	17..1061	1..1045	5225	100	Plus
sdt.n	6522	sdt.n	17..1061	1..1045	5225	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:22:14

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	8127693..8128981	1505..2793	6445	100	Plus
chrX	22417052	chrX	8130062..8131239	3303..4480	5890	100	Plus
chrX	22417052	chrX	8085072..8085376	1..305	1525	100	Plus
chrX	22417052	chrX	8102253..8102527	435..715	1250	97.2	Plus
chrX	22417052	chrX	8115464..8115705	714..955	1210	100	Plus
chrX	22417052	chrX	8127398..8127633	1271..1506	1180	100	Plus
chrX	22417052	chrX	8119688..8119921	1041..1274	1170	100	Plus
chrX	22417052	chrX	8129043..8129240	2793..2990	990	100	Plus
chrX	22417052	chrX	8129818..8130001	3122..3305	920	100	Plus
chrX	22417052	chrX	8096030..8096161	305..436	660	100	Plus
chrX	22417052	chrX	8129622..8129754	2991..3123	650	99.2	Plus
chrX	22417052	chrX	8115792..8115884	953..1045	465	100	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:28:15 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:22:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	8235881..8237169	1505..2793	6445	100	Plus
X	23542271	X	8238250..8239441	3303..4494	5960	100	Plus
X	23542271	X	8193202..8193506	1..305	1525	100	Plus
X	23542271	X	8210401..8210681	435..715	1405	100	Plus
X	23542271	X	8223627..8223868	714..955	1210	100	Plus
X	23542271	X	8235586..8235821	1271..1506	1180	100	Plus
X	23542271	X	8227866..8228099	1041..1274	1170	100	Plus
X	23542271	X	8237231..8237428	2793..2990	990	100	Plus
X	23542271	X	8238006..8238189	3122..3305	920	100	Plus
X	23542271	X	8237810..8237942	2991..3123	665	100	Plus
X	23542271	X	8204172..8204303	305..436	660	100	Plus
X	23542271	X	8223955..8224047	953..1045	465	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:05:13

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	8243979..8245267	1505..2793	6445	100	Plus
X	23527363	X	8246348..8247539	3303..4494	5960	100	Plus
X	23527363	X	8201300..8201604	1..305	1525	100	Plus
X	23527363	X	8218499..8218779	435..715	1405	100	Plus
X	23527363	X	8231725..8231966	714..955	1210	100	Plus
X	23527363	X	8243684..8243919	1271..1506	1180	100	Plus
X	23527363	X	8235964..8236197	1041..1274	1170	100	Plus
X	23527363	X	8245329..8245526	2793..2990	990	100	Plus
X	23527363	X	8246104..8246287	3122..3305	920	100	Plus
X	23527363	X	8245908..8246040	2991..3123	665	100	Plus
X	23527363	X	8212270..8212401	305..436	660	100	Plus
X	23527363	X	8232053..8232145	953..1045	465	100	Plus

Blast to na_te.dros performed 2019-03-15 21:22:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Stalker2	7672	Stalker2 STALKER2 7672bp	7095..7218	3994..3876	131	61.1	Minus

RE05272.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:23:19 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	8085072..8085330	1..259	100	==	Plus
chrX	8096030..8096161	305..436	100	->	Plus
chrX	8102255..8102330	437..512	98	==	Plus
chrX	8102446..8102526	634..714	100	->	Plus
chrX	8115465..8115562	715..812	100	==	Plus
chrX	8115627..8115703	877..953	100	->	Plus
chrX	8115793..8115884	954..1045	100	->	Plus
chrX	8119693..8119920	1046..1273	100	->	Plus
chrX	8127401..8127632	1274..1505	100	->	Plus
chrX	8127694..8128981	1506..2793	100	->	Plus
chrX	8129044..8129240	2794..2990	100	->	Plus
chrX	8129622..8129753	2991..3122	99	->	Plus
chrX	8129819..8130000	3123..3304	100	->	Plus
chrX	8130064..8131239	3305..4480	97		Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:34:38 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RH	16..2805	709..3499	99		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:01:25 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RH	16..2805	709..3499	99		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:45:22 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RP	320..3522	294..3499	99		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:25:59 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RH	16..2805	709..3499	99		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:50:53 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RP	320..3522	294..3499	99		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:34:37 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RF	1..4480	1..4480	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:01:25 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RF	1..4480	1..4480	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:45:22 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RF	3..4482	1..4480	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:26:00 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RF	1..4480	1..4480	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:53 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
sdt-RF	3..4482	1..4480	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:23:19 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	8193202..8193506	1..305	100	->	Plus
X	8204173..8204303	306..436	100	->	Plus
X	8210403..8210680	437..714	100	->	Plus
X	8223628..8223866	715..953	100	->	Plus
X	8223956..8224047	954..1045	100	->	Plus
X	8227871..8228098	1046..1273	100	->	Plus
X	8235589..8235820	1274..1505	100	->	Plus
X	8235882..8237169	1506..2793	100	->	Plus
X	8237232..8237428	2794..2990	100	->	Plus
X	8237810..8237941	2991..3122	100	->	Plus
X	8238007..8238188	3123..3304	100	->	Plus
X	8238252..8239427	3305..4480	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:23:19 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	8193202..8193506	1..305	100	->	Plus
X	8204173..8204303	306..436	100	->	Plus
X	8210403..8210680	437..714	100	->	Plus
X	8223628..8223866	715..953	100	->	Plus
X	8223956..8224047	954..1045	100	->	Plus
X	8227871..8228098	1046..1273	100	->	Plus
X	8235589..8235820	1274..1505	100	->	Plus
X	8235882..8237169	1506..2793	100	->	Plus
X	8237232..8237428	2794..2990	100	->	Plus
X	8237810..8237941	2991..3122	100	->	Plus
X	8238007..8238188	3123..3304	100	->	Plus
X	8238252..8239427	3305..4480	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:23:19 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	8193202..8193506	1..305	100	->	Plus
X	8204173..8204303	306..436	100	->	Plus
X	8210403..8210680	437..714	100	->	Plus
X	8223628..8223866	715..953	100	->	Plus
X	8223956..8224047	954..1045	100	->	Plus
X	8227871..8228098	1046..1273	100	->	Plus
X	8235589..8235820	1274..1505	100	->	Plus
X	8235882..8237169	1506..2793	100	->	Plus
X	8237232..8237428	2794..2990	100	->	Plus
X	8237810..8237941	2991..3122	100	->	Plus
X	8238007..8238188	3123..3304	100	->	Plus
X	8238252..8239427	3305..4480	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:45:22 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	8087235..8087539	1..305	100	->	Plus
arm_X	8098206..8098336	306..436	100	->	Plus
arm_X	8104436..8104713	437..714	100	->	Plus
arm_X	8117661..8117899	715..953	100	->	Plus
arm_X	8117989..8118080	954..1045	100	->	Plus
arm_X	8121904..8122131	1046..1273	100	->	Plus
arm_X	8129622..8129853	1274..1505	100	->	Plus
arm_X	8129915..8131202	1506..2793	100	->	Plus
arm_X	8131265..8131461	2794..2990	100	->	Plus
arm_X	8131843..8131974	2991..3122	100	->	Plus
arm_X	8132040..8132221	3123..3304	100	->	Plus
arm_X	8132285..8133460	3305..4480	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:01:37 Download gff for RE05272.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	8212271..8212401	306..436	100	->	Plus
X	8243687..8243918	1274..1505	100	->	Plus
X	8235969..8236196	1046..1273	100	->	Plus
X	8218501..8218778	437..714	100	->	Plus
X	8231726..8231964	715..953	100	->	Plus
X	8232054..8232145	954..1045	100	->	Plus
X	8201300..8201604	1..305	100	->	Plus
X	8243980..8245267	1506..2793	100	->	Plus
X	8245330..8245526	2794..2990	100	->	Plus
X	8245908..8246039	2991..3122	100	->	Plus
X	8246105..8246286	3123..3304	100	->	Plus
X	8246350..8247525	3305..4480	100		Plus

RE05272.pep Sequence

Translation from 919 to 3498

> RE05272.pep
MLTMLSVNQDNGPHREMAVDCPDTFIARNKTPPRYPPPRPPQLNGNAKPV
PPPRDHLRVEKDGRLVNCSPAPQLPDRRAPGNASSGSSGATTHPLQHQQI
AQIVEPTLEQLDSIKKYQEQLRRRREEEERIAQQNEFLRNSLRGSRKLKA
LQDTATPGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAEQIDGYGEL
IAALTRLQNQLSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRRR
SRVSGPLHHSSLGLQKDIVELLTQSNTAAAIELGNLLTSHEMEGLLLAHD
RIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPP
PLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDN
IRIIQIEKSTEPLGATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEV
NGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTGSQLAG
LGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDP
NWWQAYREGEEDQTLAGLIPSQSFQHQRETMKLAIAEEAGLARSRGKDGS
GSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVAL
YYPRATHKRPIVLIGPPNIGRHELRQRLMADSERFSAAVPHTSRARREGE
VPGVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKI
CVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEELK
DIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQ
WVHNNRDES*

RE05272.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:17:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF20363-PA	907	GF20363-PA	147..907	131..859	3196	88	Plus
Dana\GF12435-PA	556	GF12435-PA	132..555	394..852	879	38.6	Plus
Dana\GF14547-PA	636	GF14547-PA	82..636	256..853	640	28.3	Plus
Dana\GF16967-PA	1169	GF16967-PA	754..1169	401..853	609	31.9	Plus
Dana\GF19077-PA	1005	GF19077-PA	488..1002	402..850	425	27.2	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:17:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG19306-PA	1299	GG19306-PA	935..1299	495..859	1918	98.9	Plus
Dere\GG19306-PA	1299	GG19306-PA	549..952	42..442	1645	94.1	Plus
Dere\GG22696-PA	595	GG22696-PA	132..594	394..852	911	39.5	Plus
Dere\GG21549-PA	636	GG21549-PA	82..636	256..853	627	27.8	Plus
Dere\GG22470-PA	315	GG22470-PA	1..315	510..853	489	32.8	Plus
Dere\GG18414-PA	1004	GG18414-PA	487..1001	402..850	432	27.4	Plus
Dere\GG19306-PA	1299	GG19306-PA	76..111	1..36	164	97.2	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:17:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH24103-PA	997	GH24103-PA	153..997	42..859	3303	81.3	Plus
Dgri\GH10158-PA	636	GH10158-PA	182..636	411..853	625	30.8	Plus
Dgri\GH18714-PA	596	GH18714-PA	181..596	401..853	604	31.9	Plus
Dgri\GH21953-PA	242	GH21953-PA	13..242	635..853	522	43.5	Plus
Dgri\GH12185-PA	828	GH12185-PA	357..825	402..850	455	29.3	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:25

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
sdt-PF	859	CG32717-PF	1..859	1..859	4441	100	Plus
sdt-PH	934	CG32717-PH	76..934	1..859	4441	100	Plus
sdt-PP	1173	CG32717-PP	315..1173	1..859	4441	100	Plus
sdt-PM	1901	CG32717-PM	1080..1901	32..859	4208	99	Plus
sdt-PN	1292	CG32717-PN	475..1292	42..859	4206	99.9	Plus
sdt-PI	1269	CG32717-PI	452..1269	42..859	4206	99.9	Plus
sdt-PE	1367	CG32717-PE	550..1367	42..859	4206	99.9	Plus
sdt-PG	2020	CG32717-PG	1203..2020	42..859	4206	99.9	Plus
sdt-PB	1292	CG32717-PB	475..1292	42..859	4206	99.9	Plus
sdt-PO	1606	CG32717-PO	789..1606	42..859	4206	99.9	Plus
sdt-PL	1941	CG32717-PL	1105..1941	42..859	4167	97.5	Plus
sdt-PJ	1527	CG32717-PJ	691..1527	42..859	4167	97.5	Plus
sdt-PK	879	CG32717-PK	94..879	69..859	3817	95.2	Plus
sdt-PD	879	CG32717-PD	94..879	69..859	3817	95.2	Plus
metro-PC	585	CG30021-PC	132..584	394..852	918	40.3	Plus
metro-PA	595	CG30021-PA	132..594	394..852	897	39.5	Plus
metro-PD	546	CG30021-PD	132..545	394..852	883	39.8	Plus
metro-PB	556	CG30021-PB	132..555	394..852	862	39	Plus
vari-PE	611	CG9326-PE	82..611	256..853	641	28.7	Plus
CASK-PG	609	CG6703-PG	176..609	401..853	630	32.6	Plus
CASK-PF	916	CG6703-PF	493..916	401..853	627	32.2	Plus
vari-PB	636	CG9326-PB	82..636	256..853	621	28	Plus
vari-PF	469	CG9326-PF	4..469	399..853	613	30.9	Plus
vari-PC	469	CG9326-PC	4..469	399..853	613	30.9	Plus
CASK-PE	469	CG6703-PE	54..469	401..853	606	32.2	Plus
CASK-PD	591	CG6703-PD	176..591	401..853	606	32.2	Plus
CASK-PA	591	CG6703-PA	176..591	401..853	606	32.2	Plus
CASK-PH	929	CG6703-PH	493..903	401..858	605	31.6	Plus
CASK-PB	898	CG6703-PB	493..898	401..853	603	31.7	Plus
vari-PD	615	CG9326-PD	82..615	256..853	596	27.5	Plus
dlg1-PT	943	CG1725-PT	330..940	220..850	502	27.2	Plus
dlg1-PS	960	CG1725-PS	322..957	220..850	483	26.4	Plus
dlg1-PN	960	CG1725-PN	322..957	220..850	483	26.4	Plus
dlg1-PD	960	CG1725-PD	322..957	220..850	483	26.4	Plus
dlg1-PE	960	CG1725-PE	322..957	220..850	483	26.4	Plus
dlg1-PA	968	CG1725-PA	330..965	220..850	483	26.4	Plus
dlg1-PR	1001	CG1725-PR	322..957	220..850	483	26.4	Plus
dlg1-PQ	975	CG1725-PQ	322..972	220..850	471	26.3	Plus
dlg1-PG	975	CG1725-PG	322..972	220..850	471	26.3	Plus
dlg1-PP	983	CG1725-PP	330..980	220..850	471	26.3	Plus
dlg1-PK	911	CG1725-PK	401..908	354..850	463	27.6	Plus
dlg1-PH	911	CG1725-PH	401..908	354..850	463	27.6	Plus
dlg1-PB	970	CG1725-PB	460..967	354..850	463	27.6	Plus
dlg1-PL	946	CG1725-PL	409..943	354..850	452	26.8	Plus
CG11811-PA	233	CG11811-PA	36..211	659..832	262	33.7	Plus
sdt-PM	1901	CG32717-PM	729..905	1..179	242	36.8	Plus
sdt-PN	1292	CG32717-PN	1..177	1..179	242	36.8	Plus
sdt-PE	1367	CG32717-PE	76..252	1..179	242	36.8	Plus
sdt-PG	2020	CG32717-PG	729..905	1..179	242	36.8	Plus
sdt-PB	1292	CG32717-PB	1..177	1..179	242	36.8	Plus
sdt-PO	1606	CG32717-PO	315..491	1..179	242	36.8	Plus
sdt-PI	1269	CG32717-PI	76..117	1..42	237	100	Plus
sdt-PL	1941	CG32717-PL	729..770	1..42	237	100	Plus
sdt-PJ	1527	CG32717-PJ	315..356	1..42	237	100	Plus
dlg1-PM	1030	CG1725-PM	698..921	354..572	209	28.8	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:17:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI14373-PA	897	GI14373-PA	144..897	115..859	3039	84.1	Plus
Dmoj\GI19661-PA	556	GI19661-PA	132..555	394..852	880	39.2	Plus
Dmoj\GI22442-PA	634	GI22442-PA	182..634	411..853	650	31.9	Plus
Dmoj\GI22862-PA	594	GI22862-PA	179..594	401..853	613	31.9	Plus
Dmoj\GI15716-PA	833	GI15716-PA	341..830	402..850	441	28.1	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:17:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL20368-PA	918	GL20368-PA	169..918	131..859	3039	85	Plus
Dper\GL20641-PA	596	GL20641-PA	132..595	394..852	896	39.6	Plus
Dper\GL19590-PA	637	GL19590-PA	172..637	399..853	631	31.1	Plus
Dper\GL23741-PA	487	GL23741-PA	72..487	401..853	623	32.5	Plus
Dper\GL20800-PA	221	GL20800-PA	24..200	659..833	257	35	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:17:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA17100-PA	1002	GA17100-PA	138..1002	27..859	3393	85.1	Plus
Dpse\GA15582-PB	586	GA15582-PB	132..585	394..852	916	40.4	Plus
Dpse\GA15582-PA	596	GA15582-PA	132..595	394..852	896	39.6	Plus
Dpse\GA21703-PA	637	GA21703-PA	172..637	399..853	633	31.1	Plus
Dpse\GA19796-PA	1027	GA19796-PA	622..1027	401..853	624	32.1	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:17:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM11239-PA	1309	GM11239-PA	561..962	42..442	2028	97.3	Plus
Dsec\GM11239-PA	1309	GM11239-PA	951..1309	501..859	1991	100	Plus
Dsec\GM20471-PA	593	GM20471-PA	130..592	394..852	903	39.3	Plus
Dsec\GM23306-PA	636	GM23306-PA	82..636	256..853	641	28	Plus
Dsec\GM23693-PA	591	GM23693-PA	176..591	401..853	617	32.3	Plus
Dsec\GM25224-PA	234	GM25224-PA	37..213	659..833	267	35.2	Plus
Dsec\GM11239-PA	1309	GM11239-PA	76..111	1..36	169	100	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:17:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD25940-PA	377	GD25940-PA	1..376	430..852	807	39.6	Plus
Dsim\GD21680-PA	644	GD21680-PA	90..644	256..853	639	28	Plus
Dsim\GD18503-PA	769	GD18503-PA	354..769	401..853	617	32.3	Plus
Dsim\GD14257-PA	250	GD14257-PA	42..229	659..833	245	33.2	Plus
Dsim\GD16887-PA	512	GD16887-PA	76..111	1..36	169	100	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:17:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ19412-PA	1381	GJ19412-PA	488..1381	14..859	3423	79.6	Plus
Dvir\GJ15026-PA	595	GJ15026-PA	132..594	394..852	897	39.7	Plus
Dvir\GJ20335-PA	634	GJ20335-PA	182..634	411..853	639	31.1	Plus
Dvir\GJ14160-PA	1039	GJ14160-PA	624..1039	401..853	608	31.7	Plus
Dvir\GJ15244-PA	921	GJ15244-PA	715..918	640..850	301	31.8	Plus
Dvir\GJ15244-PA	921	GJ15244-PA	347..582	338..572	190	28.7	Plus
Dvir\GJ19412-PA	1381	GJ19412-PA	72..107	1..36	165	97.2	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:17:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK25185-PA	1626	GK25185-PA	808..1626	42..859	3391	85.6	Plus
Dwil\GK20656-PA	599	GK20656-PA	132..598	394..852	883	39.6	Plus
Dwil\GK24864-PA	641	GK24864-PA	184..641	411..853	623	31.4	Plus
Dwil\GK13019-PA	608	GK13019-PA	193..608	401..853	610	31.9	Plus
Dwil\GK16229-PA	996	GK16229-PA	423..993	341..850	433	26.7	Plus
Dwil\GK25185-PA	1626	GK25185-PA	310..345	1..36	169	100	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:17:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE15771-PA	1719	GE15771-PA	1355..1719	495..859	2009	98.9	Plus
Dyak\GE15771-PA	1719	GE15771-PA	1058..1372	131..442	1259	93.7	Plus
Dyak\GE13049-PA	315	GE13049-PA	1..314	511..852	696	40.8	Plus
Dyak\GE13543-PA	636	GE13543-PA	82..636	256..853	625	27.8	Plus
Dyak\GE24086-PA	594	GE24086-PA	179..594	401..853	619	32.3	Plus
Dyak\GE15932-PA	902	GE15932-PA	385..899	402..850	428	27.2	Plus
Dyak\GE15771-PA	1719	GE15771-PA	811..892	42..118	377	89	Plus
Dyak\GE15771-PA	1719	GE15771-PA	313..348	1..36	170	100	Plus

RE05272.hyp Sequence

Translation from 919 to 3498

> RE05272.hyp
MLTMLSVNQDNGPHREMAVDCPDTFIARNKTPPRYPPPRPPQLNGNAKPV
PPPRDHLRVEKDGRLVNCSPAPQLPDRRAPGNASSGSSGATTHPLQHQQI
AQIVEPTLEQLDSIKKYQEQLRRRREEEERIAQQNEFLRNSLRGSRKLKA
LQDTATPGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAEQIDGYGEL
IAALTRLQNQLSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRRR
SRVSGPLHHSSLGLQKDIVELLTQSNTAAAIELGNLLTSHEMEGLLLAHD
RIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPP
PLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDN
IRIIQIEKSTEPLGATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEV
NGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTGSQLAG
LGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDP
NWWQAYREGEEDQTLAGLIPSQSFQHQRETMKLAIAEEAGLARSRGKDGS
GSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVAL
YYPRATHKRPIVLIGPPNIGRHELRQRLMADSERFSAAVPHTSRARREGE
VPGVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKI
CVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEELK
DIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQ
WVHNNRDES*

RE05272.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:24

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
sdt-PF	859	CG32717-PF	1..859	1..859	4441	100	Plus
sdt-PH	934	CG32717-PH	76..934	1..859	4441	100	Plus
sdt-PP	1173	CG32717-PP	315..1173	1..859	4441	100	Plus
sdt-PM	1901	CG32717-PM	1080..1901	32..859	4208	99	Plus
sdt-PN	1292	CG32717-PN	475..1292	42..859	4206	99.9	Plus
sdt-PM	1901	CG32717-PM	729..905	1..179	242	36.8	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	52
Well:	72
Vector:	pFlc-1
Associated Gene/Transcript	sdt-RF
Protein status:	RE05272.pep: gold
Preliminary Size:	171
Sequenced Size:	4496

Clone RE05272 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE05272.complete Sequence

RE05272.complete Blast Records

RE05272.complete Sim4 Records

RE05272.pep Sequence

RE05272.pep Blast Records

RE05272.hyp Sequence

RE05272.hyp Blast Records