BDGP Sequence Production Resources |
Search the DGRC for RE05559
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 55 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13826-RA |
Protein status: | RE05559.pep: wuzgold |
Preliminary Size: | 300 |
Sequenced Size: | 1238 |
Gene | Date | Evidence |
---|---|---|
CG13826 | 2001-12-14 | Blastp of sequenced clone |
CG13826 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13826 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13826 | 2008-04-29 | Release 5.5 accounting |
CG13826 | 2008-08-15 | Release 5.9 accounting |
CG13826 | 2008-12-18 | 5.12 accounting |
1238 bp (1238 high quality bases) assembled on 2001-12-14
GenBank Submission: AY070954
> RE05559.complete AGTGTTTTTTGAACAGCCGTTCAGTGAATTACAATCGACCAGCCATTCGC TCGCTTGCTCACTTATCGTACCCCCCCCCCCCTGGCCACCGCTCTGTTTG CCACCCAACCAGCTGATATTGTGGATACTCTTAAGTGTACTACATGTCGT ATACGTAATATTCGACAAAGCTCTCTTTTTATCGAGCAAGTGTTTTGAGC GTGGCGCGCTTTTCCATATAAAATCAAAACAAAAAACGTAGTTCTAAAGT TGCAGGTACCAAGCGTAGTTGACATATTGACTCATCACCATTTGTGCCAG CTGATAAGCAATAATGATCGACTTAGAGGATCTGCCTCGGCTGCAATCCT TGTCCCCGGCGAAGGACATCGAATATACCTACCACCAGACCCAATTGCAG CTGAATCCGAAGAAGAAGGTCACCGTCCGGGTGCCCATTGGACCACCCTC GAAGTTGAGTAAGCTGATTAAGCCCACGGTGGCTTCCACGCCCGCTGTAC TGGCCAAGCCAACGCCATCCATCACCCAATCGACGACGCCAGGTAACGCC AAGACCAACATTTGGAAAGGTGGCTTCCATTTTACCAATCTGGTAAGTAT TGAAAGGCTTCGGTGTTAATTACTTTATCCAAATGCCAGCACAAATGTTC CCAGTTCAGAACGCAATATATCTATAAATTACCCCCATCAATCTAAATTA ATTTTTATGAGCAGGTCTTTTAGATAGATTGATAGTCTTCTAGCTATATT TTGAATTACACGTTCTGAATAGTGTGGCTATCTGTTTTATTGAGCAAGTC TAATACAAATGTATCCATTTGTGATATCAATAGCTAACGGAAGTTATTGT TAAGATATTTGTATTTTTGCATGCATGTAGAATATCAATATCAATATCAT GAAAAAAAATTATTTTAAATTAATATTAAGGAAATATAAAACTATATATA TCCCTTTATTTTTAATTTTAATACAAATTTCAACTTTGTTATGTAGAACT AGTTAAAAAAATGACTAATGCAAATTAACTGAAAAATTTGCATGGACACG TGTCAAAAGCTTATAAGCTTACACCATATCTACATAAAATTGCAATAGCC ACCATGTCTACATAAGTTACTCTTAGGGAAAATATAAATATGTTCTTTAT ATTCTTAAGATATTCTTTCTAAAAACTAAATCTAGAAATAAAAGGTAGGT AATAAAGATACATTTGTAACCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13826-RA | 1225 | CG13826-RA | 1..1225 | 1..1225 | 6125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19045576..19046529 | 269..1222 | 100 | <- | Minus |
chr3R | 19049850..19050117 | 1..268 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13826-RA | 1..306 | 314..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13826-RA | 1..306 | 314..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cnc-RI | 1..287 | 314..603 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13826-RA | 1..306 | 314..619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cnc-RI | 1..287 | 314..603 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13826-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13826-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cnc-RI | 4..603 | 1..603 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13826-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cnc-RI | 4..603 | 1..603 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23226441..23226708 | 1..268 | 100 | Minus | |
3R | 23222167..23223120 | 269..1222 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23226441..23226708 | 1..268 | 100 | Minus | |
3R | 23222167..23223120 | 269..1222 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23226441..23226708 | 1..268 | 100 | Minus | |
3R | 23222167..23223120 | 269..1222 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19047889..19048842 | 269..1222 | 100 | <- | Minus |
arm_3R | 19052163..19052430 | 1..268 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22962998..22963951 | 269..1222 | 100 | <- | Minus |
3R | 22967272..22967539 | 1..268 | 100 | Minus |
Translation from 313 to 618
> RE05559.hyp MIDLEDLPRLQSLSPAKDIEYTYHQTQLQLNPKKKVTVRVPIGPPSKLSK LIKPTVASTPAVLAKPTPSITQSTTPGNAKTNIWKGGFHFTNLVSIERLR C*
Translation from 313 to 618
> RE05559.pep MIDLEDLPRLQSLSPAKDIEYTYHQTQLQLNPKKKVTVRVPIGPPSKLSK LIKPTVASTPAVLAKPTPSITQSTTPGNAKTNIWKGGFHFTNLVSIERLR C*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18024-PA | 111 | GF18024-PA | 1..105 | 1..96 | 281 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12452-PA | 102 | GG12452-PA | 1..101 | 1..94 | 372 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cnc-PN | 1133 | CG43286-PN | 1..95 | 1..95 | 485 | 98.9 | Plus |
cnc-PM | 1133 | CG43286-PM | 1..95 | 1..95 | 485 | 98.9 | Plus |
cnc-PI | 1133 | CG43286-PI | 1..95 | 1..95 | 485 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23040-PA | 110 | GL23040-PA | 1..97 | 1..95 | 269 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12552-PA | 119 | GA12552-PA | 1..97 | 1..95 | 272 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23583-PA | 101 | GM23583-PA | 1..100 | 1..94 | 364 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18398-PA | 101 | GD18398-PA | 1..100 | 1..94 | 379 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13230-PA | 131 | GK13230-PA | 1..73 | 1..71 | 184 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23975-PA | 107 | GE23975-PA | 1..103 | 1..94 | 380 | 79.6 | Plus |