BDGP Sequence Production Resources |
Search the DGRC for RE05851
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 58 |
Well: | 51 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11381-RA |
Protein status: | RE05851.pep: gold |
Sequenced Size: | 1578 |
Gene | Date | Evidence |
---|---|---|
CG11381 | 2010-06-24 | Manual selection by Sue Celniker |
1578 bp assembled on 2010-12-02
GenBank Submission: BT125792.1
> RE05851.complete ATTGCTCACTCAGCATTCAAGCCCCCAAATCAGCCGCATAGACGATGCTC AAAGCCGCAAAGATCCCCTTGTTCTTCGCCCTTTTGGGTGCTGTGTGTAT CCAGGCCGTCGTGGTTGGTCCCCAGCCATTGCATAATAACAACAGGAACG GCTACCGCTACAATGGCCCCGCCCACAAGTATCTCCCATCGGAGGAGTCG CACTCGCACGGCAGCCCCTTGGATTCGAGTCACCAGCATGATCAGCAGGG CCCCAGTAATGCCTACAACTCACATCATTACCCAGCACAGGAGCAACATG GCCAGGGAGCGCCGGAGCACGACCATCAGCAGAAGGAGGTTGACTCCTGG CAAACGGCTCTTTCCCAGCAGCAACACGAGAGCTTCGGAAACCAGCAAAA TCATCAGAACGCCTACAATGAAGGACCTGTGTACCAGCACTATCAGGGAT TTAACCACCAACAACATTATGGATTAAGCCAACAGCAACAGCATGAAAGC TACGGGCAGGAACACTATCAACAGAGCCCCAACCAGCTGCAACACCATCA GTCCCAACACGCAAACGAATATGCCTACGAACCAGCTCATTTCCAGCAGC AACAGCAGCATCACGAAATTCAGGGTCACAAGCAGCATCAGCAGAGGAAA GAGCACTGGAACTTCGTTCAAGAGCAGCAACCCCAAAATCACGAACCCTG GCAATCTTCGCATGGCTTCCAACAGCACCAGCAGCAGCATTCCAATCGCT TTGAGTCACAGCTTCCGCTGCGGGAAGACCTTTGGCAACCCATTCGTGAG CTGGACCTAGAGAAGCTTCCTTCGGCTGAGGCGCACGCCAGTAGCCACAA GACAGTTGCAGCTCCTGGACGAGATGTAAAGCTCGTGCCCAGTTACACGC TCTCCAGCGACTTTGAGCACGACCGCTTCATCGGACTGGATAGTACGGAC ACTCGTCTGCTGACCCAATCTCTGCCAGATGCCTACCGGAAACAGCTGTT CTCCTCGCCACCAGAACCATCGTCTTTAGCCCAGGGACATAACCAGCAAC ACAAGCCCGGATCCGCAGCCTATGGTGGTTCCCACGGACCATCCCTTGGC GAATCCACATCCGATTTCCTGCAAATGCAGTCCCACTCGTATCAGCTGCC TTCAACGTTTACTACTCACACGGAATGGACCCAGGACAAGGAGCAGCATC AGCACAATCCCCAGCAGCAGGCCACCGGCAATCGTCAGTACTCGGCTAGT GCCTTCGCAGTGTCCCCTTCGTATCTGCACGCCTCCGAAGCCTCCCAGCC GCCCAAGAACAGCTTGCCACATCCTAGCCGTGACTTCCAGCCACCTTACT ACTAAGGCCCTTGAACAGACTTAATAACTGAATTAACTGGTAGTTCGATG CTCCACATCAACCATAAGATCGTACCAACTTCAACATTCGCTTTTCCCCG GAAAAGCATTTGGTCTGAAAAGCAAAACTATCACAGCAAGAAGTGTGCAG ATAAATACTTTTCCCTTTTTTTTTTATATATATATATTTAATAAAGAGTG CATTGGTGAACCGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6715..6920 | 473..681 | 234 | 62.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..7002 | 454..739 | 212 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6964 | 511..757 | 212 | 58.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2464 | 594..739 | 202 | 63.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6861 | 591..739 | 199 | 63.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2544 | 480..690 | 198 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6918 | 532..739 | 198 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2514 | 532..738 | 196 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2785..2990 | 481..689 | 194 | 58.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2616 | 519..819 | 193 | 57.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2687 | 454..770 | 193 | 56.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2372..2510 | 506..644 | 190 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..7012 | 366..617 | 182 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..7013 | 433..696 | 181 | 58.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2608 | 543..849 | 180 | 54.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6944 | 433..639 | 179 | 56.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2473 | 485..655 | 172 | 59 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2358..2851 | 231..739 | 169 | 56.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6951 | 391..613 | 168 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2373..2644 | 366..643 | 167 | 58.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2647..2945 | 454..746 | 167 | 56.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6897 | 594..739 | 167 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6646..6880 | 511..740 | 165 | 56.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..7212 | 273..741 | 147 | 52.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2440 | 599..739 | 142 | 58.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1006..1150 | 481..617 | 139 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2609 | 366..644 | 138 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1373..1600 | 438..656 | 136 | 55 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1161 | 581..691 | 130 | 64.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1097796..1097857 | 1..62 | 100 | -> | Plus |
chrX | 1097912..1099411 | 63..1563 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 1..1311 | 45..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 1..1311 | 45..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 1..1311 | 45..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 1..1311 | 45..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 40..1601 | 1..1563 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 40..1601 | 1..1563 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 42..1603 | 1..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11381-RA | 42..1603 | 1..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1203818..1203879 | 1..62 | 100 | -> | Plus |
X | 1203934..1205433 | 63..1563 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1203818..1203879 | 1..62 | 100 | -> | Plus |
X | 1203934..1205433 | 63..1563 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1203818..1203879 | 1..62 | 100 | -> | Plus |
X | 1203934..1205433 | 63..1563 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1097851..1097912 | 1..62 | 100 | -> | Plus |
arm_X | 1097967..1099466 | 63..1563 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1212032..1213531 | 63..1563 | 99 | Plus | |
X | 1211916..1211977 | 1..62 | 100 | -> | Plus |
Translation from 44 to 1354
> RE05851.pep MLKAAKIPLFFALLGAVCIQAVVVGPQPLHNNNRNGYRYNGPAHKYLPSE ESHSHGSPLDSSHQHDQQGPSNAYNSHHYPAQEQHGQGAPEHDHQQKEVD SWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQHYGLSQQQQH ESYGQEHYQQSPNQLQHHQSQHANEYAYEPAHFQQQQQHHEIQGHKQHQQ RKEHWNFVQEQQPQNHEPWQSSHGFQQHQQQHSNRFESQLPLREDLWQPI RELDLEKLPSAEAHASSHKTVAAPGRDVKLVPSYTLSSDFEHDRFIGLDS TDTRLLTQSLPDAYRKQLFSSPPEPSSLAQGHNQQHKPGSAAYGGSHGPS LGESTSDFLQMQSHSYQLPSTFTTHTEWTQDKEQHQHNPQQQATGNRQYS ASAFAVSPSYLHASEASQPPKNSLPHPSRDFQPPYY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22142-PA | 553 | GF22142-PA | 274..553 | 181..436 | 566 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12836-PA | 477 | GG12836-PA | 3..477 | 2..436 | 1466 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11381-PA | 436 | CG11381-PA | 1..436 | 1..436 | 2407 | 100 | Plus |
Smr-PF | 3601 | CG4013-PF | 4..291 | 16..283 | 213 | 24.6 | Plus |
Smr-PE | 3601 | CG4013-PE | 4..291 | 16..283 | 213 | 24.6 | Plus |
Smr-PD | 3601 | CG4013-PD | 4..291 | 16..283 | 213 | 24.6 | Plus |
Smr-PG | 3607 | CG4013-PG | 4..297 | 16..283 | 202 | 23.9 | Plus |
dysc-PG | 1254 | CG43749-PG | 1040..1248 | 26..228 | 192 | 25.4 | Plus |
ovo-PC | 1222 | CG6824-PC | 675..1023 | 48..398 | 191 | 26 | Plus |
ovo-PE | 1351 | CG6824-PE | 804..1152 | 48..398 | 191 | 26 | Plus |
ovo-PB | 1351 | CG6824-PB | 804..1152 | 48..398 | 191 | 26 | Plus |
ovo-PA | 975 | CG6824-PA | 250..437 | 48..234 | 188 | 31.8 | Plus |
ovo-PD | 1028 | CG6824-PD | 303..490 | 48..234 | 188 | 31.8 | Plus |
Camta-PE | 1842 | CG42332-PE | 114..261 | 104..266 | 172 | 33.1 | Plus |
Camta-PD | 1881 | CG42332-PD | 114..261 | 104..266 | 172 | 33.1 | Plus |
sr-PE | 906 | CG7847-PE | 265..475 | 26..241 | 171 | 29.2 | Plus |
sr-PB | 906 | CG7847-PB | 265..475 | 26..241 | 171 | 29.2 | Plus |
sr-PA | 1186 | CG7847-PA | 545..755 | 26..241 | 171 | 29.2 | Plus |
sr-PD | 1271 | CG7847-PD | 545..755 | 26..241 | 171 | 29.2 | Plus |
Pdp1-PJ | 633 | CG17888-PJ | 48..216 | 30..233 | 170 | 31.9 | Plus |
Pdp1-PD | 647 | CG17888-PD | 48..216 | 30..233 | 170 | 31.9 | Plus |
CG10543-PD | 1631 | CG10543-PD | 1068..1443 | 52..402 | 169 | 22.8 | Plus |
CG10543-PE | 1634 | CG10543-PE | 1071..1446 | 52..402 | 169 | 22.8 | Plus |
CG10543-PA | 1634 | CG10543-PA | 1071..1446 | 52..402 | 169 | 22.8 | Plus |
CG10543-PF | 1635 | CG10543-PF | 1072..1447 | 52..402 | 169 | 22.8 | Plus |
spen-PH | 5458 | CG18497-PH | 3739..3923 | 93..283 | 164 | 28.6 | Plus |
spen-PC | 5476 | CG18497-PC | 3757..3941 | 93..283 | 164 | 28.6 | Plus |
spen-PG | 5487 | CG18497-PG | 3741..3925 | 93..283 | 164 | 28.6 | Plus |
spen-PE | 5505 | CG18497-PE | 3759..3943 | 93..283 | 164 | 28.6 | Plus |
spen-PD | 5505 | CG18497-PD | 3759..3943 | 93..283 | 164 | 28.6 | Plus |
spen-PF | 5510 | CG18497-PF | 3764..3948 | 93..283 | 164 | 28.6 | Plus |
spen-PB | 5533 | CG18497-PB | 3814..3998 | 93..283 | 164 | 28.6 | Plus |
spen-PA | 5560 | CG18497-PA | 3814..3998 | 93..283 | 164 | 28.6 | Plus |
spen-PH | 5458 | CG18497-PH | 3735..3924 | 75..243 | 160 | 29.7 | Plus |
spen-PC | 5476 | CG18497-PC | 3753..3942 | 75..243 | 160 | 29.7 | Plus |
spen-PG | 5487 | CG18497-PG | 3737..3926 | 75..243 | 160 | 29.7 | Plus |
spen-PE | 5505 | CG18497-PE | 3755..3944 | 75..243 | 160 | 29.7 | Plus |
spen-PD | 5505 | CG18497-PD | 3755..3944 | 75..243 | 160 | 29.7 | Plus |
spen-PF | 5510 | CG18497-PF | 3760..3949 | 75..243 | 160 | 29.7 | Plus |
spen-PB | 5533 | CG18497-PB | 3810..3999 | 75..243 | 160 | 29.7 | Plus |
spen-PA | 5560 | CG18497-PA | 3810..3999 | 75..243 | 160 | 29.7 | Plus |
CG6118-PB | 883 | CG6118-PB | 127..262 | 106..233 | 160 | 32.9 | Plus |
CG6118-PD | 966 | CG6118-PD | 211..346 | 106..233 | 160 | 32.9 | Plus |
CG6118-PC | 967 | CG6118-PC | 211..346 | 106..233 | 160 | 32.9 | Plus |
kis-PF | 5191 | CG3696-PF | 256..622 | 48..420 | 160 | 24.9 | Plus |
kis-PE | 5252 | CG3696-PE | 256..622 | 48..420 | 160 | 24.9 | Plus |
kis-PA | 5322 | CG3696-PA | 256..622 | 48..420 | 160 | 24.9 | Plus |
kis-PD | 5343 | CG3696-PD | 256..622 | 48..420 | 160 | 24.9 | Plus |
kis-PC | 5517 | CG3696-PC | 256..622 | 48..420 | 160 | 24.9 | Plus |
ovo-PA | 975 | CG6824-PA | 235..434 | 11..224 | 158 | 28.9 | Plus |
ovo-PD | 1028 | CG6824-PD | 288..487 | 11..224 | 158 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14236-PA | 444 | GL14236-PA | 241..443 | 247..436 | 377 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10963-PA | 449 | GA10963-PA | 243..448 | 247..436 | 383 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19121-PA | 436 | GM19121-PA | 1..436 | 1..436 | 1984 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16548-PA | 436 | GD16548-PA | 1..436 | 1..436 | 1955 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24900-PA | 424 | GK24900-PA | 279..424 | 245..436 | 217 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16671-PA | 407 | GE16671-PA | 1..407 | 1..436 | 1173 | 66.9 | Plus |
Translation from 44 to 1354
> RE05851.hyp MLKAAKIPLFFALLGAVCIQAVVVGPQPLHNNNRNGYRYNGPAHKYLPSE ESHSHGSPLDSSHQHDQQGPSNAYNSHHYPAQEQHGQGAPEHDHQQKEVD SWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQHYGLSQQQQH ESYGQEHYQQSPNQLQHHQSQHANEYAYEPAHFQQQQQHHEIQGHKQHQQ RKEHWNFVQEQQPQNHEPWQSSHGFQQHQQQHSNRFESQLPLREDLWQPI RELDLEKLPSAEAHASSHKTVAAPGRDVKLVPSYTLSSDFEHDRFIGLDS TDTRLLTQSLPDAYRKQLFSSPPEPSSLAQGHNQQHKPGSAAYGGSHGPS LGESTSDFLQMQSHSYQLPSTFTTHTEWTQDKEQHQHNPQQQATGNRQYS ASAFAVSPSYLHASEASQPPKNSLPHPSRDFQPPYY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11381-PA | 436 | CG11381-PA | 1..436 | 1..436 | 2407 | 100 | Plus |
Smr-PF | 3601 | CG4013-PF | 4..291 | 16..283 | 213 | 24.6 | Plus |
Smr-PE | 3601 | CG4013-PE | 4..291 | 16..283 | 213 | 24.6 | Plus |
Smr-PD | 3601 | CG4013-PD | 4..291 | 16..283 | 213 | 24.6 | Plus |
Smr-PG | 3607 | CG4013-PG | 4..297 | 16..283 | 202 | 23.9 | Plus |