BDGP Sequence Production Resources |
Search the DGRC for RE06653
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 66 |
Well: | 53 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12091-RA |
Protein status: | RE06653.pep: gold |
Preliminary Size: | 1224 |
Sequenced Size: | 1835 |
Gene | Date | Evidence |
---|---|---|
CG12091 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12091 | 2002-06-10 | Blastp of sequenced clone |
CG12091 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12091 | 2008-04-29 | Release 5.5 accounting |
CG12091 | 2008-08-15 | Release 5.9 accounting |
CG12091 | 2008-12-18 | 5.12 accounting |
1835 bp (1835 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121659
> RE06653.complete AGTTCTGAACCGGATCGCGACCTGACGAGAAAAAGTGTATCACTTCATCA CATAACATTTCGCATTTAATTGGAACGTAAATTGTGTGCCCCGTCGAGAC AGGAGTTTTGCACCGGAAAAAACGAGTGCGGAGGAGTGGCGTGTAGGAGT GAACGCCAAGGAGGAGCACTCCGACGTCGTAACAAACGAATAAAACGAAT CCAAATCCGACACCCCCCCACATGCGATTGATTTGATTGATTGAGAGCAC GAGACCACGAGTTCTGGGCGATGCACTCGTCACTCAGCTGGACCTCGCGT GCGATCTCTCGCGCCCTGCGCAGCAGCTTCTCCACGCTCCTGGAAACGGC CACGGGTGGCGGAAGTGGGGCAGCAGCCAAGGGGGCCACCAAGTCGGGAG CGACACCAGGATCCTCGGGCGCCCCACGACCCCGTTTCGTGTCGGTGGTG TGCGGCTTCGCCAAGGACAACCTGCGACACAAGTACAAGCCGGGAAAGTA CGGCGAGGACTCATGGTTCAAGGCCTCCACCGCCAGTGCCGATGTCATGG GCGTGGCCGACGGCGTGGGCGGCTGGCGAAGCTATGGCATCGATCCCGGA GAGTTTTCATCGTTCCTGATGCGCACCTGTGAGCGGTTGGTGCAGTGCAG CCACTTTAATCCCCAACGACCAGTCAACCTGCTGGCCTACAGCTACTGCG AGCTGATGGAGCAGAAGAAGCCCATACTGGGCAGCAGCACCGCCTGCGTC CTGATCCTCAACCGTGAGACGAGCACCGTGCACACGGCCAACATCGGCGA CAGCGGCTTCGTTGTGGTGCGCGAAGGCCAGGTGGTTCACAAGTCCGAGG AGCAGCAGCACTATTTTAACACACCCTTCCAACTGTCATTGCCGCCGCCG GGACATGGGCCCAATGTCCTCAGCGACAGCCCTGAGTCGGCGGACACGAT GAGCTTTCCGGTGCGGGATGGCGACGTGATTCTCATTGCAACCGACGGAG TGTTCGACAACGTGCCCGAGGATCTAATGCTGCAGGTGCTTAGCGAGGTG GAGGGCGAACGCGATCCCGTCAAGCTCCAGATGACGGCCAACAGCCTGGC GCTGATGGCGCGCACCCTGTCCCTCAACAGCGAGTTCCTCTCGCCCTTCG CCCTCAGCGCCAGGAGGAATAACATTCAGGCGCGTGGCGGCAAGCCGGAC GACATCACCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAG CCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGT TAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGT TGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCA TTGTTAGTTACATATATACGAGCAAACTCATTTTCGAACCGACGAATCGA CTTCGACGCATCCTGGTGAGCGACCCGCGCCTCGATTGTATACATAACCC TCGCTATAAGTAGAGAATGCGAATTATCTGCCCGATCTGGCGATCTCTGT CGTCAGTGGCGTTCTAATCACCACAAACAATAAACAAACAACCGATTGCG AAACAATCCCCGACGCCGAGGATCATAAATACGAGTCCGGGGTCCGGATG ATGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGC TATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGT CTTTAAACAATTTTTGTCGAAATGTACTCACTGATATTTGCGACCCAATA AAATTTATTCAATGAAAAACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1534499..1536318 | 1820..1 | 8995 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1535010..1536831 | 1822..1 | 9110 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1535010..1536831 | 1822..1 | 9110 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1534499..1536318 | 1..1820 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..966 | 271..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..966 | 271..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..966 | 271..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..966 | 271..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..966 | 271..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..1820 | 1..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..1820 | 1..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 5..1824 | 1..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 1..1820 | 1..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12091-RA | 5..1824 | 1..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1535012..1536831 | 1..1820 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1535012..1536831 | 1..1820 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1535012..1536831 | 1..1820 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1535012..1536831 | 1..1820 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1535012..1536831 | 1..1820 | 100 | Minus |
Translation from 270 to 1235
> RE06653.pep MHSSLSWTSRAISRALRSSFSTLLETATGGGSGAAAKGATKSGATPGSSG APRPRFVSVVCGFAKDNLRHKYKPGKYGEDSWFKASTASADVMGVADGVG GWRSYGIDPGEFSSFLMRTCERLVQCSHFNPQRPVNLLAYSYCELMEQKK PILGSSTACVLILNRETSTVHTANIGDSGFVVVREGQVVHKSEEQQHYFN TPFQLSLPPPGHGPNVLSDSPESADTMSFPVRDGDVILIATDGVFDNVPE DLMLQVLSEVEGERDPVKLQMTANSLALMARTLSLNSEFLSPFALSARRN NIQARGGKPDDITVVLATVAM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25028-PA | 324 | GF25028-PA | 1..324 | 1..321 | 1533 | 92.6 | Plus |
Dana\GF21131-PA | 460 | GF21131-PA | 194..460 | 55..320 | 936 | 65.2 | Plus |
Dana\GF22865-PA | 332 | GF22865-PA | 46..327 | 38..321 | 654 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14592-PA | 321 | GG14592-PA | 1..321 | 1..321 | 1673 | 97.5 | Plus |
Dere\GG17623-PA | 375 | GG17623-PA | 105..374 | 51..319 | 938 | 63.7 | Plus |
Dere\GG12003-PA | 317 | GG12003-PA | 46..314 | 54..321 | 626 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15200-PA | 311 | GH15200-PA | 1..311 | 1..321 | 1511 | 88.2 | Plus |
Dgri\GH12845-PA | 343 | GH12845-PA | 1..340 | 1..318 | 914 | 52.6 | Plus |
Dgri\GH13984-PA | 307 | GH13984-PA | 29..302 | 48..321 | 655 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12091-PB | 321 | CG12091-PB | 1..321 | 1..321 | 1657 | 100 | Plus |
CG12091-PA | 321 | CG12091-PA | 1..321 | 1..321 | 1657 | 100 | Plus |
CG15035-PA | 374 | CG15035-PA | 107..373 | 54..319 | 860 | 59.9 | Plus |
fig-PA | 314 | CG7615-PA | 43..309 | 54..319 | 607 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16719-PA | 311 | GI16719-PA | 1..311 | 1..321 | 1509 | 89.1 | Plus |
Dmoj\GI14148-PA | 311 | GI14148-PA | 1..311 | 1..321 | 1509 | 89.1 | Plus |
Dmoj\GI14933-PA | 348 | GI14933-PA | 1..347 | 1..319 | 932 | 53.3 | Plus |
Dmoj\GI22329-PA | 312 | GI22329-PA | 36..306 | 54..319 | 641 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22485-PA | 211 | GL22485-PA | 1..207 | 1..215 | 977 | 85.1 | Plus |
Dper\GL23811-PA | 326 | GL23811-PA | 39..316 | 44..321 | 553 | 43.5 | Plus |
Dper\GL14622-PA | 653 | GL14622-PA | 401..652 | 50..319 | 432 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11388-PA | 313 | GA11388-PA | 1..313 | 1..321 | 1529 | 89.7 | Plus |
Dpse\GA20482-PA | 340 | GA20482-PA | 67..316 | 74..321 | 625 | 50 | Plus |
Dpse\GA28301-PA | 498 | GA28301-PA | 245..497 | 50..319 | 416 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14206-PA | 321 | GM14206-PA | 1..321 | 1..321 | 1690 | 98.8 | Plus |
Dsec\GM17470-PA | 374 | GM17470-PA | 107..374 | 54..320 | 885 | 60.1 | Plus |
Dsec\GM12223-PA | 314 | GM12223-PA | 34..311 | 46..321 | 630 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13469-PA | 321 | GD13469-PA | 1..321 | 1..321 | 1695 | 99.1 | Plus |
Dsim\GD17671-PA | 314 | GD17671-PA | 43..311 | 54..321 | 620 | 46.3 | Plus |
Dsim\GD24581-PA | 197 | GD24581-PA | 107..192 | 54..138 | 277 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12462-PA | 311 | GJ12462-PA | 1..311 | 1..321 | 1513 | 89.7 | Plus |
Dvir\GJ18963-PA | 348 | GJ18963-PA | 66..347 | 39..319 | 912 | 59.2 | Plus |
Dvir\GJ10517-PA | 313 | GJ10517-PA | 36..309 | 54..321 | 644 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17200-PA | 317 | GK17200-PA | 1..317 | 1..321 | 1491 | 88.5 | Plus |
Dwil\GK16148-PA | 359 | GK16148-PA | 90..358 | 52..319 | 981 | 66.2 | Plus |
Dwil\GK19179-PA | 315 | GK19179-PA | 29..311 | 41..321 | 669 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20952-PA | 321 | GE20952-PA | 1..321 | 1..321 | 1679 | 97.8 | Plus |
Dyak\GE17524-PA | 372 | GE17524-PA | 105..371 | 54..319 | 962 | 65.2 | Plus |
Dyak\GE10429-PA | 320 | GE10429-PA | 49..317 | 54..321 | 607 | 46 | Plus |
Translation from 270 to 1235
> RE06653.hyp MHSSLSWTSRAISRALRSSFSTLLETATGGGSGAAAKGATKSGATPGSSG APRPRFVSVVCGFAKDNLRHKYKPGKYGEDSWFKASTASADVMGVADGVG GWRSYGIDPGEFSSFLMRTCERLVQCSHFNPQRPVNLLAYSYCELMEQKK PILGSSTACVLILNRETSTVHTANIGDSGFVVVREGQVVHKSEEQQHYFN TPFQLSLPPPGHGPNVLSDSPESADTMSFPVRDGDVILIATDGVFDNVPE DLMLQVLSEVEGERDPVKLQMTANSLALMARTLSLNSEFLSPFALSARRN NIQARGGKPDDITVVLATVAM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12091-PB | 321 | CG12091-PB | 1..321 | 1..321 | 1657 | 100 | Plus |
CG12091-PA | 321 | CG12091-PA | 1..321 | 1..321 | 1657 | 100 | Plus |
CG15035-PA | 374 | CG15035-PA | 107..373 | 54..319 | 860 | 59.9 | Plus |
fig-PA | 314 | CG7615-PA | 43..309 | 54..319 | 607 | 45.5 | Plus |