BDGP Sequence Production Resources |
Search the DGRC for RE06996
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 69 |
Well: | 96 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG30411-RA |
Protein status: | RE06996.pep: gold |
Sequenced Size: | 1247 |
Gene | Date | Evidence |
---|---|---|
CG30411 | 2001-12-14 | Blastp of sequenced clone |
CG5357 | 2002-01-01 | Sim4 clustering to Release 2 |
CG30411 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30411 | 2008-04-29 | Release 5.5 accounting |
CG30411 | 2008-08-15 | Release 5.9 accounting |
CG30411 | 2008-12-18 | 5.12 accounting |
1247 bp (1247 high quality bases) assembled on 2001-12-14
GenBank Submission: AY070971
> RE06996.complete GGTGTTTCACACGCCGACTGGAGGAGGAGGCGTAGGTGGTGGCCAGCCAG CAGACAGCAGCGAATCATCATCAAACGAGTCCGAAAGGAGCGTGAGGAGC AGTGAGGGCAGACACATGTCGCCATGTTGACAAGGGCGTGGGAGTGGGAA TGGTTGCCAGCGATGTTCGGGATGTTTCCGATGCGGCTGGTGTGGCTGGT GGTGCTGCTCTGTTTGCTACCTGGGCAGGTGCTGCTCGGCAACGCCGCCT CGGTCACCTGGGGTCATGTCAACAAATACGCCAGCGTGCTGCACACCGAA GATGTTTACCTGACGCCGGGTAGCCCCGGCCGAGATGTGGCCTACGGCTT GCAGAAAGCCAGCGATAACTACCGGATTACGGGTGTGCATGTCGAAGATC TAGGCGCCGATGAAGCGGAGGCGGTGCTCACGTCTGGCGGCATTGGCCAG CAGTTTGTGGTCCTCCGCTGCCGGCGACTTCGGGACTCCGAGGGGCAGCC GGAGCGAGCGGCTCATCTCGAGGTGTCCATCTATGGAGTGGACCTGTAGG CTGTCTGACCCATTGTTGTAAATATCAATTAGTGTACGGAGCTTTCAGCT GTGCAAGCCAAGGAAAGCACATAGGAAAATGGGTTGTATCTTTGAGATAC AAAAAGCACATATATAAGCTTAAATTAGTATATATTTTAAGTAAACAAAT TTCAAATATTTCACGCATAGAATAAATTCCTTTATGTTTATAGATAGCAC TATTTGAAGTACAAACGAAACATCTGTAGCCCTGAACTTCCCACGCCCAC CTCTATATTTATATTCAATGCTATCTGGAGTGAAATCGACATCTTCAGAT TGTGTTTATTACCCAAGACACACGGTCGCTATAGTAATGATAGGTTTTTA TCTGCCCCGTGGACTGAAAACTTTGTAACTGTGCACTGAACAACGTAATA ACATTTAAAGTTAAAAGTTGCCAGGGGTTGTGAAGTTTGGATGTCGCTTA AAGGCTGTCGGGTTTTTATAATCTTATGGAAATGTGTAGTAAGTTTGTAA CTGTGTGAAAACCTGTAAGCTGCGGGCATTATTTGCCTTTTTTTTTGCCT TTCAGTGCATTTCAGCCTTAATAAGTTCATTTTTCCATTGCAGCCAGATG CACGAGCTTGAATTTATTTAATTAAAATGTAATAAGTCTAACAAGTCGGA CATCATAATAAACTTTCGCTCAAAACAAAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30411.b | 1847 | CG30411.b | 133..1361 | 4..1232 | 6145 | 100 | Plus |
CG30411-RA | 1387 | CG30411-RA | 133..1361 | 4..1232 | 6145 | 100 | Plus |
CG30411.a | 1476 | CG30411.a | 133..1167 | 4..1038 | 5175 | 100 | Plus |
CG30411.a | 1476 | CG30411.a | 1168..1256 | 1144..1232 | 445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19302273..19302626 | 1..354 | 99 | -> | Plus |
chr2R | 19302690..19303563 | 355..1231 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..426 | 124..549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..426 | 124..549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..426 | 124..549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..426 | 124..549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..426 | 124..549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..1231 | 3..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..1231 | 3..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 7..1237 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 1..1231 | 3..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30411-RA | 7..1237 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23415945..23416298 | 1..354 | 99 | -> | Plus |
2R | 23416362..23417238 | 355..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23415945..23416298 | 1..354 | 99 | -> | Plus |
2R | 23416362..23417238 | 355..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23415945..23416298 | 1..354 | 99 | -> | Plus |
2R | 23416362..23417238 | 355..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19303468..19303821 | 1..354 | 99 | -> | Plus |
arm_2R | 19303885..19304761 | 355..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23417162..23417515 | 1..354 | 99 | -> | Plus |
2R | 23417579..23418455 | 355..1231 | 100 | Plus |
Translation from 123 to 548
> RE06996.hyp MLTRAWEWEWLPAMFGMFPMRLVWLVVLLCLLPGQVLLGNAASVTWGHVN KYASVLHTEDVYLTPGSPGRDVAYGLQKASDNYRITGVHVEDLGADEAEA VLTSGGIGQQFVVLRCRRLRDSEGQPERAAHLEVSIYGVDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30411-PA | 141 | CG30411-PA | 1..141 | 1..141 | 747 | 100 | Plus |
Translation from 123 to 548
> RE06996.pep MLTRAWEWEWLPAMFGMFPMRLVWLVVLLCLLPGQVLLGNAASVTWGHVN KYASVLHTEDVYLTPGSPGRDVAYGLQKASDNYRITGVHVEDLGADEAEA VLTSGGIGQQFVVLRCRRLRDSEGQPERAAHLEVSIYGVDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13054-PA | 140 | GF13054-PA | 31..140 | 34..141 | 349 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22852-PA | 133 | GG22852-PA | 1..133 | 1..141 | 493 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21225-PA | 131 | GH21225-PA | 24..131 | 38..141 | 202 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30411-PA | 141 | CG30411-PA | 1..141 | 1..141 | 747 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20511-PA | 141 | GI20511-PA | 19..140 | 39..141 | 185 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16911-PA | 131 | GL16911-PA | 33..66 | 42..75 | 157 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15827-PA | 139 | GA15827-PA | 33..139 | 42..141 | 332 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16010-PA | 125 | GM16010-PA | 1..125 | 14..141 | 533 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11761-PA | 138 | GD11761-PA | 1..138 | 1..141 | 591 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22362-PA | 134 | GJ22362-PA | 32..134 | 40..141 | 185 | 43.5 | Plus |
Dvir\GJ22363-PA | 134 | GJ22363-PA | 32..134 | 40..141 | 153 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23181-PA | 132 | GK23181-PA | 34..132 | 43..141 | 236 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14288-PA | 130 | GE14288-PA | 1..130 | 1..141 | 517 | 77.3 | Plus |