BDGP Sequence Production Resources |
Search the DGRC for RE07082
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 70 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Hexo2-RA |
Protein status: | RE07082.pep: gold |
Sequenced Size: | 2150 |
Gene | Date | Evidence |
---|---|---|
CG1787 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1787 | 2002-05-23 | Blastp of sequenced clone |
CG1787 | 2003-01-01 | Sim4 clustering to Release 3 |
Hexo2 | 2008-04-29 | Release 5.5 accounting |
Hexo2 | 2008-08-15 | Release 5.9 accounting |
Hexo2 | 2008-12-18 | 5.12 accounting |
2150 bp (2150 high quality bases) assembled on 2002-05-23
GenBank Submission: AY118361
> RE07082.complete CGAGTGTTGTTGTGCTCGGCGAGCGGAGCGGGTGGGCGGCCGGTTGAAAA TAGCGAATACACCGTACACACCCCCCTAACACAACAAATATAGCAAATAC CGAACAGAAATTATAAAAGCGAGCGGCGCAGCCAAAGAAGCCGTTAGAAA GAAACGATGCGGTTCAGCGGCTACAATCGTTATCAGTGCTTTTGCTCTGC TGTTGGATCGCTGCTGCTATTATCCCTATTATCCTTCGCGGTCGGCGCTG CGCTGACGCGGGCAGATGACGTCGGCAGCGACGCCGACGCCGGCAGCGCC AGCAGGAAATGGCTGTGCAGCCGGACGGATATCTGCACCGCGGAGGGCGA GATGGTGGCCGGACTGCAGTACGCGCCGGAGATCTTCGAGAGCCAGCGGG ATTGCCGACTGTCGTGCGGCAAGTACGGAGCCATCTGGCCCATGCCCACC GGCAAGGAGTGCACCATATCGCACAGGCGGGTACGATTCGATCCGTGGAA GGTGCGTTTCCATGTTGTGGCGCCCGGCGAGGCGGCCACCCAGTTTCTCA GGGAGACGAACCGGCTGTTCGTCTCGAATCTGCTGAAGGAGTGCATACGA AACTGCACGCTGGAGACCAGCAAGCAGATTCTGGTCAGATCCACGGTGGC CAACGAGAGCCTCGTTCTGGACTGGCCCACCGACGAGAGCTACGCCCTGG TGGTGCGAACCACTGAAACGGCCACCTTTGTGGACATCCAAGCGACGACG GTGTACGGTGCACGTCATGCCTTCGAGACGCTGAGCAACCTGGTCACCGG CAGCCTGTCCAATGGCCTGCTGATGGTCACCACGGCCAACATCACCGATC GTCCGGCCTTTTCGCATCGCGGCGTCCTTCTGGATACGGCCCGTAACTTT GTGCCGCTCAAGTTTATACGCAGCACCTTGGATGCGATGGCGGCCAGTAA GCTGAATGTGCTCCACTGGCATGTGGTGGACACGCACAGTTTTCCGCTGG AGATCACCAGGGTGCCGGAGATGCAGCGTTACGGAGCGTACTCCTCATCG CAGACGTACTCGCGCCAGGATGCACTGAATCTTGTGAAATATGCCCGACT GCGGGGCATACGGATACTGATCGAGATCGATGGACCCTCGCATGCGGGCA ATGGCTGGCAATGGGGTCCTGCCGCCGGACTGGGCAACATGTCCGTGTGC CTGAATCAATCGCCCTGGAGGAGATTCTGTGTACAGCCACCGTGCGGCCA ACTGAATCCCCTGAACGATCATATGTACGCAGTGCTCAAGGAGATCTTCG AGGACGTAGCCGAGGTGGGCGCTCCCGAGGAGACCCTGCACATGGGCGGC GACGAGGTGTTCCTTCCCTGCTGGAATAACACCGACGAGATTCGGGATGG GATGCGGGCACGTGGCTACGATCTCAGCGAGCAGAGCTTCCTGCGGCTGT GGTCACAATTCCATCAGCGGAACCTCAATGCATGGGACGAGATTAACGAG CGTATGTATCCGGGCATCAAGGAGCCGAAGTCGGTGATCATCTGGTCCAG TCACCTCACCAATCCCCGGTACATCGAGACCTACCTGCCCAAGGAGCGGT TCATAATCCAGACATGGGTGGAGTCACAGGATGCCCTCAATCGGGAGCTA TTGCAGCGAGGCTACCGACTGATTGTGTCCACGAAGAATGCCTGGTACCT GGATCACGGCTTCTGGGGCAGCACATCGTACTACAACTGGCGCACCGTGT ACTCCAGTGGCATGCCCGTTGGTCGCAGCAAGGATCAGGTTCTCGGCGGT GAGGTGTGCATGTGGAGCGAGTATGTGGATCAGAACTCACTGGAATCCCG AATCTGGCCGCGAGCTGGAGCAGCAGCCGAGCGAATGTGGTCAAATCCAA AGTCTTCAGCCCTGTTGGCCCAAAGAAGATTCTACCGCTACCGGGAGCGA CTCCTGGCGCGCGGAATCCATGCGGATGCAGTTATTCCGCACTGGTGCGT CCTCCACGAAGGACAGTGCCTCTAAATCGGTCGTTCCGAACCTAGTTTTA GCACCAGCACATACCATGTACATACCTTTCAAACTATGTTATTTTATTCA TCAGTTATTGCCCATAAAGATCTGTTTTTAATCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8602309..8603849 | 303..1843 | 7660 | 99.8 | Plus |
chrX | 22417052 | chrX | 8601402..8601705 | 3..306 | 1520 | 100 | Plus |
chrX | 22417052 | chrX | 8603919..8604210 | 1843..2134 | 1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8603920..8604210 | 1844..2134 | 100 | Plus | |
chrX | 8601401..8601704 | 1..305 | 99 | -> | Plus |
chrX | 8602312..8603849 | 306..1843 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 1..1869 | 157..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 1..1869 | 157..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 1..1869 | 157..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 1..1869 | 157..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 1..1869 | 157..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 2..2133 | 3..2134 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 2..2133 | 3..2134 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 3..2135 | 1..2134 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 2..2133 | 3..2134 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hexo2-RA | 3..2135 | 1..2134 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8709654..8709957 | 1..305 | 99 | -> | Plus |
X | 8710575..8712112 | 306..1843 | 99 | -> | Plus |
X | 8712183..8712473 | 1844..2134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8709654..8709957 | 1..305 | 99 | -> | Plus |
X | 8710575..8712112 | 306..1843 | 99 | -> | Plus |
X | 8712183..8712473 | 1844..2134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8709654..8709957 | 1..305 | 99 | -> | Plus |
X | 8710575..8712112 | 306..1843 | 99 | -> | Plus |
X | 8712183..8712473 | 1844..2134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8603687..8603990 | 1..305 | 99 | -> | Plus |
arm_X | 8604608..8606145 | 306..1843 | 99 | -> | Plus |
arm_X | 8606216..8606506 | 1844..2134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8717752..8718055 | 1..305 | 99 | -> | Plus |
X | 8718673..8720210 | 306..1843 | 99 | -> | Plus |
X | 8720281..8720571 | 1844..2134 | 100 | Plus |
Translation from 156 to 2024
> RE07082.pep MRFSGYNRYQCFCSAVGSLLLLSLLSFAVGAALTRADDVGSDADAGSASR KWLCSRTDICTAEGEMVAGLQYAPEIFESQRDCRLSCGKYGAIWPMPTGK ECTISHRRVRFDPWKVRFHVVAPGEAATQFLRETNRLFVSNLLKECIRNC TLETSKQILVRSTVANESLVLDWPTDESYALVVRTTETATFVDIQATTVY GARHAFETLSNLVTGSLSNGLLMVTTANITDRPAFSHRGVLLDTARNFVP LKFIRSTLDAMAASKLNVLHWHVVDTHSFPLEITRVPEMQRYGAYSSSQT YSRQDALNLVKYARLRGIRILIEIDGPSHAGNGWQWGPAAGLGNMSVCLN QSPWRRFCVQPPCGQLNPLNDHMYAVLKEIFEDVAEVGAPEETLHMGGDE VFLPCWNNTDEIRDGMRARGYDLSEQSFLRLWSQFHQRNLNAWDEINERM YPGIKEPKSVIIWSSHLTNPRYIETYLPKERFIIQTWVESQDALNRELLQ RGYRLIVSTKNAWYLDHGFWGSTSYYNWRTVYSSGMPVGRSKDQVLGGEV CMWSEYVDQNSLESRIWPRAGAAAERMWSNPKSSALLAQRRFYRYRERLL ARGIHADAVIPHWCVLHEGQCL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19129-PA | 616 | GF19129-PA | 1..616 | 1..622 | 2964 | 87.5 | Plus |
Dana\GF25061-PA | 620 | GF25061-PA | 56..595 | 83..621 | 984 | 37.6 | Plus |
Dana\GF12448-PA | 663 | GF12448-PA | 218..663 | 175..622 | 888 | 38.8 | Plus |
Dana\GF12449-PA | 715 | GF12449-PA | 92..617 | 83..586 | 772 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18269-PA | 618 | GG18269-PA | 1..618 | 1..622 | 3266 | 97.3 | Plus |
Dere\GG15218-PA | 622 | GG15218-PA | 58..597 | 83..621 | 989 | 38.1 | Plus |
Dere\GG22574-PA | 660 | GG22574-PA | 88..660 | 83..622 | 868 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24516-PA | 624 | GH24516-PA | 31..624 | 41..622 | 2465 | 74.1 | Plus |
Dgri\GH15943-PA | 608 | GH15943-PA | 59..601 | 83..621 | 1036 | 39.1 | Plus |
Dgri\GH20571-PA | 676 | GH20571-PA | 90..676 | 83..622 | 918 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hexo2-PA | 622 | CG1787-PA | 1..622 | 1..622 | 3329 | 100 | Plus |
Hexo1-PF | 606 | CG1318-PF | 6..597 | 14..621 | 972 | 35.7 | Plus |
Hexo1-PE | 606 | CG1318-PE | 6..597 | 14..621 | 972 | 35.7 | Plus |
Hexo1-PD | 606 | CG1318-PD | 6..597 | 14..621 | 972 | 35.7 | Plus |
Hexo1-PA | 622 | CG1318-PA | 6..597 | 14..621 | 972 | 35.7 | Plus |
fdl-PF | 660 | CG8824-PF | 195..660 | 154..622 | 871 | 37.5 | Plus |
fdl-PC | 660 | CG8824-PC | 195..660 | 154..622 | 871 | 37.5 | Plus |
fdl-PE | 672 | CG8824-PE | 207..672 | 154..622 | 871 | 37.5 | Plus |
fdl-PB | 673 | CG8824-PB | 208..673 | 154..622 | 871 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15081-PA | 614 | GI15081-PA | 6..614 | 13..622 | 2422 | 73.1 | Plus |
Dmoj\GI16594-PA | 603 | GI16594-PA | 59..596 | 83..621 | 1051 | 39.5 | Plus |
Dmoj\GI19764-PA | 664 | GI19764-PA | 90..664 | 83..622 | 912 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12954-PA | 617 | GL12954-PA | 1..617 | 1..622 | 2698 | 79.7 | Plus |
Dper\GL13089-PA | 558 | GL13089-PA | 2..548 | 75..621 | 2130 | 69.3 | Plus |
Dper\GL17874-PA | 607 | GL17874-PA | 59..598 | 83..621 | 996 | 38.1 | Plus |
Dper\GL10214-PA | 655 | GL10214-PA | 89..655 | 83..622 | 892 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14705-PA | 617 | GA14705-PA | 1..617 | 1..622 | 2821 | 82.8 | Plus |
Dpse\GA26101-PA | 605 | GA26101-PA | 26..596 | 51..621 | 2190 | 68.7 | Plus |
Dpse\GA12099-PA | 607 | GA12099-PA | 59..598 | 83..621 | 1003 | 38.7 | Plus |
Dpse\GA21348-PA | 655 | GA21348-PA | 89..655 | 83..622 | 892 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21777-PA | 622 | GM21777-PA | 1..622 | 1..622 | 3329 | 98.7 | Plus |
Dsec\GM14649-PA | 622 | GM14649-PA | 58..597 | 83..621 | 986 | 37.9 | Plus |
Dsec\GM20356-PA | 673 | GM20356-PA | 101..673 | 83..622 | 881 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16914-PA | 577 | GD16914-PA | 1..577 | 1..622 | 2998 | 91.5 | Plus |
Dsim\GD13835-PA | 622 | GD13835-PA | 58..597 | 83..621 | 984 | 37.9 | Plus |
Dsim\GD25835-PA | 673 | GD25835-PA | 101..673 | 83..622 | 886 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18889-PA | 611 | GJ18889-PA | 36..611 | 51..622 | 2514 | 78.7 | Plus |
Dvir\GJ12846-PA | 637 | GJ12846-PA | 59..598 | 83..621 | 1043 | 39.2 | Plus |
Dvir\GJ18228-PA | 673 | GJ18228-PA | 215..673 | 162..622 | 908 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10305-PA | 624 | GK10305-PA | 39..624 | 37..622 | 2628 | 79.4 | Plus |
Dwil\GK10559-PA | 605 | GK10559-PA | 57..596 | 83..621 | 1038 | 37.2 | Plus |
Dwil\GK17832-PA | 1229 | GK17832-PA | 656..1229 | 83..622 | 888 | 34.2 | Plus |
Dwil\GK17832-PA | 1229 | GK17832-PA | 263..505 | 277..532 | 507 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15800-PA | 627 | GE15800-PA | 26..627 | 21..622 | 3158 | 96.8 | Plus |
Dyak\GE21437-PA | 622 | GE21437-PA | 58..597 | 83..621 | 988 | 38.2 | Plus |
Dyak\GE13443-PA | 660 | GE13443-PA | 195..660 | 154..622 | 871 | 37.1 | Plus |
Translation from 156 to 2024
> RE07082.hyp MRFSGYNRYQCFCSAVGSLLLLSLLSFAVGAALTRADDVGSDADAGSASR KWLCSRTDICTAEGEMVAGLQYAPEIFESQRDCRLSCGKYGAIWPMPTGK ECTISHRRVRFDPWKVRFHVVAPGEAATQFLRETNRLFVSNLLKECIRNC TLETSKQILVRSTVANESLVLDWPTDESYALVVRTTETATFVDIQATTVY GARHAFETLSNLVTGSLSNGLLMVTTANITDRPAFSHRGVLLDTARNFVP LKFIRSTLDAMAASKLNVLHWHVVDTHSFPLEITRVPEMQRYGAYSSSQT YSRQDALNLVKYARLRGIRILIEIDGPSHAGNGWQWGPAAGLGNMSVCLN QSPWRRFCVQPPCGQLNPLNDHMYAVLKEIFEDVAEVGAPEETLHMGGDE VFLPCWNNTDEIRDGMRARGYDLSEQSFLRLWSQFHQRNLNAWDEINERM YPGIKEPKSVIIWSSHLTNPRYIETYLPKERFIIQTWVESQDALNRELLQ RGYRLIVSTKNAWYLDHGFWGSTSYYNWRTVYSSGMPVGRSKDQVLGGEV CMWSEYVDQNSLESRIWPRAGAAAERMWSNPKSSALLAQRRFYRYRERLL ARGIHADAVIPHWCVLHEGQCL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hexo2-PA | 622 | CG1787-PA | 1..622 | 1..622 | 3329 | 100 | Plus |
Hexo1-PF | 606 | CG1318-PF | 6..597 | 14..621 | 972 | 35.7 | Plus |
Hexo1-PE | 606 | CG1318-PE | 6..597 | 14..621 | 972 | 35.7 | Plus |
Hexo1-PD | 606 | CG1318-PD | 6..597 | 14..621 | 972 | 35.7 | Plus |
Hexo1-PA | 622 | CG1318-PA | 6..597 | 14..621 | 972 | 35.7 | Plus |