Clone RE07695 Report

Search the DGRC for RE07695

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:76
Well:95
Vector:pFlc-1
Associated Gene/TranscriptCG32813-RI
Protein status:RE07695.pep: gold
Sequenced Size:3272

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32813-RC 2010-11-11 Gleaning Pick By Joe Carlson

Clone Sequence Records

RE07695.complete Sequence

3272 bp assembled on 2011-02-18

GenBank Submission: BT126087.1

> RE07695.complete
ACTCCAACGGTACTTCTGAGCGTGCCCGAATTCGAATTGGAATTCAGTCG
AGCTTTGCGCGTCGTCGCCGCCGTTCGCGAAGTTTGTTGCTGGATGGGCT
CGTTCGCTATCCCCCACCCCCACTTATGTCGTGTCGTGTCGTTGTCTCTC
TCTCTCTCTCGTACTCGCTCAAAGCCTGTCACCCACTTTTCTGCGCCCGC
TCGCCGGCTTTGGCGCGGCCTTAAAACCTTCACGACGTCTTGCAAACGGT
TGAAAATGGAGAAGACTCCCCGGTACACGCAGCGGGAGCGGAACATGGTG
TTGAGCTACGCGGCGCAGTACAAGGATGTGATCGAGAACAAGCGCACGGA
CGCGGAGTCCAACCGCAAGAAGGACGAGGTGTGGCTGCAGATCGCCAAGG
AGTTCAACTCGCGGGTCTACCACCAGCGCAGCGCCAAGCAGCTGCGCCAG
CTTTACAAGAACATGAAGCTGCTGCTCAAAAAGGACCTATGCGGCGAGGA
CAAGAGCAACCATTCGTTCATGGACCTGCTCAACACGCTGTCGCACCAGG
AGTCCGTGGCCCAGTACATTGCCGAGCAGCTGTCGCCGGAGGGCGCGGGC
GGTGGCGGCGGCGGCGGTAAGCAAGGCGGCGCGGGCAACGGAGGCGGAAA
CGGACACCAATCGGACGACTACGACGACTCCAAGATGCCCCACTACCACG
AGGGCATGGACACGGACGTGATCCTTATCAAGTCGGAGACAATTAGCGAC
AACGAGCAGACGGACAATGGCATGGACTGCCTGGACGAGGACGATGACGA
CGACTGCTTGAGCCACAAGGCGCCGGAGGTGTGCCTCGAGGAGGAGGACG
ACGTGCTCTTTCCAACGGACGTGCGCCAGCTGCAGCAGGTGGGATCGTCC
GGAGCCGCCGGCGGTGGTGTCTCCGGAGGCTCCCTTCCCGGAAACATGTC
TAGCAACGGGATTACCGAAACCAGTCGCCGCGCCGCAAGCTCGCCCGTGT
GCTCCACGAAGACCTCGATTAGTTCCAGCGGGAGCTACGCATCAGCGCCC
AAACCGGACATCACTATCCAGACCGTGGGCCACATACGCGTGGGCAGCTT
TGCCAACATCAACAAGACGCTGCAGAACGGCGGCTCCGGCACAGGAGCTG
TCCTATCAGCGGCCAGCAATGGCGGCTCCAGTGCCAGTGGAGTGCTGCCG
CTCACAGCGGAGCAAGTGCAGCAGCACACGCTGCTGAACGGCCTAGGATT
GTCCGCCGTGAATCCGGCTCAGTCTCTGCAGGCGGCCATCAATGCCGCCT
ATGGGTCCGCCGCTCCATCTTCATCGGTCGCCATTAGCAGCCGCCGCACC
CCTCCCACTCTGCAGTTGCCACGCCTTCAGCGCGGAAACATCAACAATAG
CCACCACACTGCCGGCAGCACAAGCAATTCCGCGGTGGCCTCCAATGGAG
TGCAACTGTTGCTCAACGGCGGCCACCACGCACAGATGACGCACAACCAT
TTGGCGCGGGACAAGACAGGAGGCGTGGCCATCGGGGCGGCGGGCAGTTT
CAACGGGTACAACGGACTGGCAGTGGCGGGCACAGTGTGCAGCGCCTTGA
ACAGCAGCGGATCCGGAGCCGGAAGCGGCGGGAGCAGTGCCAACAACAGC
GGCGTGGGCCTGGGGATCGGCGGGGCACACACGTCGGGCAGCGGAGGAAG
TGGCAGCGGTGGGACGAGGAGCCAGCACCAGGAGCTGATGAATTCGCTGA
GGATCGAGGAGAGCAAGCGGAAAATCGACCTGATCAACGCCCAAATCGAA
TACTGGCAGACGCTCACCCGCAAGCTGAACAGTCAGGCGAATCACATGCC
CAATCCTGCGTGCCCGTGCCACTTCCCTGGAGCCAGTGTGCTCTCGCCCG
TCGCCGTGACCGCCGCTAGTGCCTCATCGTCCGCTTCCGCCAATGTGTTG
CAGACGCAGGCCAGCACCAGCTAGTCCGCAGCCAAGGGGCGGTTCGAACT
AGTCGGGGGTCCTGCGGGCGAAAGCGAAAGCGACAGCGACATCATCTCGA
TAGTGGACATAGATGATGGGCGGTCTAGGGAGGACGAGCAGTCGGAGGAC
GATGGCGAGAACCGTGACCAGGCCATAACGGACCTGACGCTACCCGACGA
AGACGAGGAAGACGATGTAACGAAGATGACTCACAGGATGCCTTGGTCAG
GGATGTTGGCGTGGTGGGCGGCCTGTCGTCGCCAGATACACCGCCCCACT
CCTCTCCGCCGCCAGCGAAGCGCTCGAAGCGCCAGGAAGTCACCTCCGAG
CTCCTGAGGCAGCTGGCCCTGCAGCAGAATCAGGATCCCCAGGAGGGGTG
CTAGTATTTTGTCTAGTTTGCTAATTTTATACTTGCTACCATGGATTGAC
GCAACCACTTTGTAACATTAATTTTACCATATATATTTATTTACGCCCAG
TTTGAGTGCCAAAACAGAAACCAAGATTGGGGCCTTGCCATCGAAAATGC
TTGCCAAAGGACCTGCTGAAATAACCGGTCATAACCACTCGCGACCCACT
ATTTATTTGCCAGCCTAACTGAAACATAGCGATTCATCTCATTTTAAAAT
GTCTTGCGTCGCCTATTTTTTTATTGCCTTTTTTTTTCTATACATGTAAC
GTGTTTATTTTTAAGTTTTCCTACGAGCTGCTACCAAAAAGAATAAGAAG
AAGAAGGTGACTATCTTGAATGTACATTTACTTTACAAAACTAGACCTTA
CTTACTTACTTAATTAGAGATCGAGCAGCTAAGAACGCATGAAAATGAAA
TGTACAAATGTGGTTCCTAATCTAGTCCCTAAAGTCAAAAGTGAAGAACG
AAAGAGCTACAGAAAAGAAATCGAAATTGTTACGCCTAGCAGAGAACTTG
TGTATTATTTTTTTATATCGCTTAGATTGTTCCCCCGAGGAAAGCATTGA
AGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGAAACCAAACCAA
TGATTTGAAATGGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCATAA
CTGTGTAAATGTGGCACACAAACCATTTAGTTAGTGTTAGTGCTACTGTA
CGTGTAAAATACAATTAATTGCCTATCCAGACCCAGTAACCACAATTTAC
AAGGAAGCACACACCAAACGAAACTGAAAACCAAGAAAACAAAACTATTT
ATACAATTTTGTAAACAAGAACTTATTAATAAAACAATGAATTTAAAAAA
AAAAAGAAAAAAAAAAAAAAAA

RE07695.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:44:47
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1284204..1286762 683..3245 12595 99.7 Plus
chrX 22417052 chrX 1283531..1283987 228..684 2285 100 Plus
chrX 22417052 chrX 1282502..1282726 1..227 1040 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1390274..1392837 683..3245 12755 99.9 Plus
X 23542271 X 1389601..1390057 228..684 2285 100 Plus
X 23542271 X 1388570..1388796 1..227 1135 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1398372..1400935 683..3245 12765 99.9 Plus
X 23527363 X 1397699..1398155 228..684 2285 100 Plus
X 23527363 X 1396668..1396894 1..227 1135 100 Plus
Blast to na_te.dros performed 2019-03-17 01:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 26..90 3190..3255 138 69.7 Plus
hopper 1435 hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11). 148..202 2614..2667 119 70.9 Plus

RE07695.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:45:43 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1282502..1282726 1..227 98 -> Plus
chrX 1283531..1283894 228..591 100 == Plus
chrX 1283957..1283987 654..684 100 -> Plus
chrX 1284206..1286761 685..3244 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-18 13:21:05 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG32813-RC 1..1881 94..1974 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:51:15 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG32813-RI 1..1719 256..1974 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:09:33 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG32813-RI 1..1719 256..1974 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 13:21:05 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG32813-RC 1..3245 1..3244 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:51:15 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG32813-RJ 3..3247 1..3244 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:09:33 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG32813-RJ 3..3247 1..3244 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:45:43 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
X 1388570..1388796 1..227 100 -> Plus
X 1389601..1390057 228..684 100 -> Plus
X 1390276..1392836 685..3244 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:45:43 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
X 1388570..1388796 1..227 100 -> Plus
X 1389601..1390057 228..684 100 -> Plus
X 1390276..1392836 685..3244 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:45:43 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
X 1388570..1388796 1..227 100 -> Plus
X 1389601..1390057 228..684 100 -> Plus
X 1390276..1392836 685..3244 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:51:15 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1282603..1282829 1..227 100 -> Plus
arm_X 1283634..1284090 228..684 100 -> Plus
arm_X 1284309..1286869 685..3244 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:59:49 Download gff for RE07695.complete
Subject Subject Range Query Range Percent Splice Strand
X 1396668..1396894 1..227 100 -> Plus
X 1397699..1398155 228..684 100 -> Plus
X 1398374..1400934 685..3244 99   Plus

RE07695.hyp Sequence

Translation from 0 to 1973

> RE07695.hyp
TPTVLLSVPEFELEFSRALRVVAAVREVCCWMGSFAIPHPHLCRVVSLSL
SLSRTRSKPVTHFSAPARRLWRGLKTFTTSCKRLKMEKTPRYTQRERNMV
LSYAAQYKDVIENKRTDAESNRKKDEVWLQIAKEFNSRVYHQRSAKQLRQ
LYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVAQYIAEQLSPEGAG
GGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKSETISD
NEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSS
GAAGGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAP
KPDITIQTVGHIRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLP
LTAEQVQQHTLLNGLGLSAVNPAQSLQAAINAAYGSAAPSSSVAISSRRT
PPTLQLPRLQRGNINNSHHTAGSTSNSAVASNGVQLLLNGGHHAQMTHNH
LARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNSSGSGAGSGGSSANNS
GVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKIDLINAQIE
YWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVL
QTQASTS*

RE07695.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32813-PK 572 CG32813-PK 1..572 86..657 2938 100 Plus
CG32813-PJ 572 CG32813-PJ 1..572 86..657 2938 100 Plus
CG32813-PI 572 CG32813-PI 1..572 86..657 2938 100 Plus
CG32813-PN 572 CG32813-PN 1..572 86..657 2938 100 Plus
CG32813-PM 572 CG32813-PM 1..572 86..657 2938 100 Plus

RE07695.pep Sequence

Translation from 0 to 1973

> RE07695.pep
TPTVLLSVPEFELEFSRALRVVAAVREVCCWMGSFAIPHPHLCRVVSLSL
SLSRTRSKPVTHFSAPARRLWRGLKTFTTSCKRLKMEKTPRYTQRERNMV
LSYAAQYKDVIENKRTDAESNRKKDEVWLQIAKEFNSRVYHQRSAKQLRQ
LYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVAQYIAEQLSPEGAG
GGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKSETISD
NEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSS
GAAGGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAP
KPDITIQTVGHIRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLP
LTAEQVQQHTLLNGLGLSAVNPAQSLQAAINAAYGSAAPSSSVAISSRRT
PPTLQLPRLQRGNINNSHHTAGSTSNSAVASNGVQLLLNGGHHAQMTHNH
LARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNSSGSGAGSGGSSANNS
GVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKIDLINAQIE
YWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVL
QTQASTS*

RE07695.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21014-PA 601 GF21014-PA 18..601 77..657 1773 75 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12851-PA 742 GG12851-PA 1..613 50..640 2247 85.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24878-PA 606 GH24878-PA 1..377 86..463 999 60.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG32813-PK 572 CG32813-PK 1..572 86..657 2938 100 Plus
CG32813-PJ 572 CG32813-PJ 1..572 86..657 2938 100 Plus
CG32813-PI 572 CG32813-PI 1..572 86..657 2938 100 Plus
CG32813-PN 572 CG32813-PN 1..572 86..657 2938 100 Plus
CG32813-PM 572 CG32813-PM 1..572 86..657 2938 100 Plus
CG32813-PL 572 CG32813-PL 1..572 86..657 2938 100 Plus
CG32813-PB 572 CG32813-PB 1..572 86..657 2938 100 Plus
CG32813-PD 572 CG32813-PD 1..572 86..657 2938 100 Plus
CG32813-PH 581 CG32813-PH 1..581 86..657 2918 98.5 Plus
fs(1)h-PH 1105 CG2252-PH 584..945 190..591 165 23.9 Plus
fs(1)h-PF 1110 CG2252-PF 589..950 190..591 165 23.9 Plus
fs(1)h-PE 1110 CG2252-PE 589..950 190..591 165 23.9 Plus
fs(1)h-PD 1110 CG2252-PD 589..950 190..591 165 23.9 Plus
fs(1)h-PC 1110 CG2252-PC 589..950 190..591 165 23.9 Plus
fs(1)h-PA 1110 CG2252-PA 589..950 190..591 165 23.9 Plus
fs(1)h-PI 1115 CG2252-PI 594..955 190..591 165 23.9 Plus
fs(1)h-PB 2038 CG2252-PB 589..950 190..591 165 23.9 Plus
fs(1)h-PG 2046 CG2252-PG 589..950 190..591 165 23.9 Plus
CG7300-PD 886 CG7300-PD 563..882 289..570 159 26.4 Plus
CG7300-PB 886 CG7300-PB 563..882 289..570 159 26.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15693-PA 843 GI15693-PA 387..748 76..463 1075 64.6 Plus
Dmoj\GI15693-PA 843 GI15693-PA 765..843 575..657 242 60.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14248-PA 657 GL14248-PA 80..657 75..657 1604 62.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22717-PA 653 GA22717-PA 80..653 75..657 1619 62.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19133-PA 210 GM19133-PA 6..201 38..230 651 80.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24714-PA 572 GD24714-PA 1..572 86..657 2411 95.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19219-PA 769 GJ19219-PA 1..454 86..526 1205 60.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16307-PA 653 GK16307-PA 1..522 86..631 1353 60.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16685-PA 594 GE16685-PA 1..476 155..657 1660 84.8 Plus