BDGP Sequence Production Resources |
Search the DGRC for RE07960
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 79 |
Well: | 60 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32147-RA |
Protein status: | RE07960.pep: gold |
Sequenced Size: | 893 |
Gene | Date | Evidence |
---|---|---|
CG32147 | 2001-12-14 | Blastp of sequenced clone |
CG6988 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32147 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32147 | 2008-04-29 | Release 5.5 accounting |
CG32147 | 2008-08-15 | Release 5.9 accounting |
CG32147 | 2008-12-18 | 5.12 accounting |
893 bp (893 high quality bases) assembled on 2001-12-14
GenBank Submission: AY070984
> RE07960.complete AGTTGGGGTGTTTGTTATGGCGTCGTCAGATCGAAAGCTCATTGTAGTCT CCGGATTTGGTCCATTTCTCGGTCACGAAGCGGTCAACGCCAGCTGGGAA GCTGTGAAACTGCTGCCGGAAATCCTAACTCACGATGGCATAGAATATGA TCTGGAAAAGCGGTTGGTTTCGGTGGAATACGGGGCTGTGGACGAGGCGG TGGCGGAGATTTGGAAACGCCAGCCATATCTTGTTATCCATGTCGGTGTT TCGGGCGTTGCCAAGTGTGTATACATCGAGAAGCTGGCGTACAATCACAA GTTCCGCCGAGCTGATAATTGTGATAAAAAACTGGCCAACGGCACTTGCG AACTACCCAACAATGGACATGCAAATGTCTTGAAGACCGAATTAGATGTG GATAAGATTGTGGCGGTTGTAAATGAGAATTGCGCCGATTGTGTGGGACC CACACAACAGCCGACACATAATGATAATCTCAAATCCCTGAGCGCCACAA AGGCATCCAAAAATGTGGGTGACTTTCTCTGCGGCTATATCTATCTGAAA TCGCTCGATATGGACAGAAAACGAAGCCTGTTTGTCCATGTACCTCCTGT AGATAGGCCATTTAGTAGTGTTAAGACTTCGGAAATACTTTTTAGCATAG TCGAACAATGCATTCAACAGGTGGTCGCTTTTGACTCCTGAATTCCGCAA AATATTCTTCCAATATCTGTCTTTTTAAGAATTATTTACATGTGTGCTGT TAAGTTGTTTAAGAAATGAGTTTTATTCTTTTTAAGATACAATATTTTAT ATTTACTTTTTATTACAATGAAACAGAGAAGCAATACAACTGCATTAATA ATTACACAGTCTTTTTTGCGTTTACACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32147-RA | 936 | CG32147-RA | 35..913 | 1..879 | 4395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 770..884 | 721..835 | 114 | 61 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15133128..15133778 | 230..877 | 98 | <- | Minus |
chr3L | 15133865..15134093 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..675 | 17..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..675 | 17..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..675 | 17..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..675 | 17..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..675 | 17..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..877 | 1..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..877 | 1..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 35..911 | 1..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 1..877 | 1..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32147-RA | 35..911 | 1..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15143063..15143710 | 230..877 | 100 | <- | Minus |
3L | 15143797..15144025 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15143063..15143710 | 230..877 | 100 | <- | Minus |
3L | 15143797..15144025 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15143063..15143710 | 230..877 | 100 | <- | Minus |
3L | 15143797..15144025 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15136163..15136810 | 230..877 | 100 | <- | Minus |
arm_3L | 15136897..15137125 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15136163..15136810 | 230..877 | 100 | <- | Minus |
3L | 15136897..15137125 | 1..229 | 100 | Minus |
Translation from 0 to 690
> RE07960.hyp VGVFVMASSDRKLIVVSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYD LEKRLVSVEYGAVDEAVAEIWKRQPYLVIHVGVSGVAKCVYIEKLAYNHK FRRADNCDKKLANGTCELPNNGHANVLKTELDVDKIVAVVNENCADCVGP TQQPTHNDNLKSLSATKASKNVGDFLCGYIYLKSLDMDRKRSLFVHVPPV DRPFSSVKTSEILFSIVEQCIQQVVAFDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32147-PA | 224 | CG32147-PA | 1..224 | 6..229 | 1169 | 100 | Plus |
Translation from 16 to 690
> RE07960.pep MASSDRKLIVVSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRL VSVEYGAVDEAVAEIWKRQPYLVIHVGVSGVAKCVYIEKLAYNHKFRRAD NCDKKLANGTCELPNNGHANVLKTELDVDKIVAVVNENCADCVGPTQQPT HNDNLKSLSATKASKNVGDFLCGYIYLKSLDMDRKRSLFVHVPPVDRPFS SVKTSEILFSIVEQCIQQVVAFDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10738-PA | 225 | GF10738-PA | 1..222 | 1..221 | 868 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13680-PA | 223 | GG13680-PA | 1..223 | 1..224 | 1120 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17032-PA | 224 | GH17032-PA | 1..217 | 1..221 | 825 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32147-PA | 224 | CG32147-PA | 1..224 | 1..224 | 1169 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12237-PA | 219 | GI12237-PA | 1..217 | 1..223 | 763 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25768-PA | 223 | GL25768-PA | 1..218 | 1..221 | 856 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16713-PA | 223 | GA16713-PA | 1..218 | 1..221 | 864 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24500-PA | 224 | GM24500-PA | 1..224 | 1..224 | 1169 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12571-PA | 224 | GD12571-PA | 1..224 | 1..224 | 1167 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11468-PA | 221 | GJ11468-PA | 1..220 | 1..224 | 821 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20489-PA | 219 | GK20489-PA | 2..216 | 3..219 | 785 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19976-PA | 223 | GE19976-PA | 1..223 | 1..224 | 1104 | 92 | Plus |