BDGP Sequence Production Resources |
Search the DGRC for RE08174
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 81 |
Well: | 74 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11617-RA |
Protein status: | RE08174.pep: gold |
Preliminary Size: | 885 |
Sequenced Size: | 1278 |
Gene | Date | Evidence |
---|---|---|
CG11617 | 2001-12-14 | Blastp of sequenced clone |
CG11617 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11617 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11617 | 2008-04-29 | Release 5.5 accounting |
CG11617 | 2008-08-15 | Release 5.9 accounting |
CG11617 | 2008-12-18 | 5.12 accounting |
1278 bp (1278 high quality bases) assembled on 2001-12-14
GenBank Submission: AY070989
> RE08174.complete AGTCAATTGCTATTAGAACTGCAAACTGCTATTAGCCAATACTTCATCGT GTTTCCGTTCTCGCAGGAACCTCATGGACAAGTCAACGCGGCCTAAACGA AATCGTCGACACAGCAGACGAGCCTGGCCACCAGAGGAGGAGTTGCATCC AGCATCCCGAGCTACAAAGAGATTATTTACTCCCGACATTAAGAGGATGC TAAAGGACTGGTTAATTCGTCGCCGGGAGAATCCCTATCCTAGCAGGGAG GAGAAAAAACAGCTTGCTGCAGAGACTGGACTTACTTACACTCAGATTTG CAATTGGTTTGCAAACTGGCGAAGAAAGCTTAAAAACTCGGAGCGAGAGA AAGCCAAGAAATCCTGGGGCCATCTGATCAAAAATTACAATCACAATGCA AGGGGTAATGTGGAACAATTTAGCATCTCGTCGGAGGATAGCATTTGGGA GGAGGAGATGCACTCATGTCCTGCGGAGGATGACGAAGGCGACGATAATG AAGAGTTTTCCAGCCACAGTACTGGTAGCGATGGCAATGCCAATAATGAA CCTTCATCCCCATACAAGCCGATATTGTTTGTAGGATCTGCAGGTCTGAC CGAGCGGATATCAGCACAAACAGGGGGTAAGACCAAGTACAAGCATCAGA TGATGGAAAAGTATATGCGAGATAGTTCCACGGCAAAAACGACCAGTCAA CAGGGTACGCAACTCAACAAGTGGCTGGAAAGTGCAGCAAAATTCACACC GGACAGGAACAATTATCACATCGAGTGGAATATGACCAGGCAGAAAGCTA GCAGTAATAGCAGTTGTGGACAAGCGATCTTTACCACAGATGTGTCTGGG GCTGGTCGTGGTGGACGCTGGATGCTTCATCATAAGGACGAACTGGAAGC AGCAGAGGCCTTAGCCAACCTCGCCTTCAACTGCAGGCAGCGCTGGCACC ATATCTAAAGACTGAAGACTCCGGAACTGACGCCATCATTCCAGCAGAAG TTTCAGGCCCCGCTAAAACGTGCAATCTAGTCAAGTGGGCTTCTTCTGGT TTTCATTTTCGAACTTTACAGTACAATACTCACTCGTTACATGATTTTCT TCAAGTTTAAAACCTTTTAGCTACACTCATTTAAATTATGTGATAAACTA CGACGATCATATTCATGTAAACGTGAAAACCAGGTTGCGCCGAGAGTTAA GAATTACTACAGCTAGTTTAGAGTGAAAAACAATTATATAATTTTTTGAT TTCTTGTTATACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 205323..205998 | 790..115 | 3380 | 100 | Minus |
chr2L | 23010047 | chr2L | 204794..205266 | 1261..788 | 2320 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 207284..207350 | 67..1 | 335 | 100 | Minus |
chr2L | 23010047 | chr2L | 206053..206103 | 117..67 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 205271..205946 | 790..115 | 3380 | 100 | Minus |
2L | 23513712 | 2L | 204735..205214 | 1268..788 | 2325 | 99.4 | Minus |
2L | 23513712 | 2L | 207231..207297 | 67..1 | 335 | 100 | Minus |
2L | 23513712 | 2L | 206001..206051 | 117..67 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 205271..205946 | 790..115 | 3380 | 100 | Minus |
2L | 23513712 | 2L | 204735..205214 | 1268..788 | 2335 | 99.3 | Minus |
2L | 23513712 | 2L | 207231..207297 | 67..1 | 335 | 100 | Minus |
2L | 23513712 | 2L | 206001..206051 | 117..67 | 255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 204793..205264 | 790..1262 | 99 | <- | Minus |
chr2L | 205324..205995 | 118..789 | 100 | <- | Minus |
chr2L | 206053..206102 | 68..117 | 100 | <- | Minus |
chr2L | 207284..207350 | 1..67 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..885 | 74..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..885 | 74..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..885 | 74..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..885 | 74..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..885 | 74..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..1260 | 1..1262 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..1260 | 1..1262 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..1259 | 1..1260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..1260 | 1..1262 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11617-RA | 1..1259 | 1..1260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 204741..205212 | 790..1262 | 99 | <- | Minus |
2L | 205272..205943 | 118..789 | 100 | <- | Minus |
2L | 206001..206050 | 68..117 | 100 | <- | Minus |
2L | 207231..207297 | 1..67 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 204741..205212 | 790..1262 | 99 | <- | Minus |
2L | 205272..205943 | 118..789 | 100 | <- | Minus |
2L | 206001..206050 | 68..117 | 100 | <- | Minus |
2L | 207231..207297 | 1..67 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 204741..205212 | 790..1262 | 99 | <- | Minus |
2L | 205272..205943 | 118..789 | 100 | <- | Minus |
2L | 206001..206050 | 68..117 | 100 | <- | Minus |
2L | 207231..207297 | 1..67 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 204741..205212 | 790..1262 | 99 | <- | Minus |
arm_2L | 205272..205943 | 118..789 | 100 | <- | Minus |
arm_2L | 206001..206050 | 68..117 | 100 | <- | Minus |
arm_2L | 207231..207297 | 1..67 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 204741..205212 | 790..1262 | 99 | <- | Minus |
2L | 205272..205943 | 118..789 | 100 | <- | Minus |
2L | 206001..206050 | 68..117 | 100 | <- | Minus |
2L | 207231..207297 | 1..67 | 100 | Minus |
Translation from 73 to 957
> RE08174.pep MDKSTRPKRNRRHSRRAWPPEEELHPASRATKRLFTPDIKRMLKDWLIRR RENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSEREKAKKSWGH LIKNYNHNARGNVEQFSISSEDSIWEEEMHSCPAEDDEGDDNEEFSSHST GSDGNANNEPSSPYKPILFVGSAGLTERISAQTGGKTKYKHQMMEKYMRD SSTAKTTSQQGTQLNKWLESAAKFTPDRNNYHIEWNMTRQKASSNSSCGQ AIFTTDVSGAGRGGRWMLHHKDELEAAEALANLAFNCRQRWHHI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24526-PA | 311 | GF24526-PA | 1..304 | 1..293 | 1152 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24672-PA | 298 | GG24672-PA | 1..298 | 1..294 | 1352 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10229-PA | 333 | GH10229-PA | 1..326 | 1..294 | 1053 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11617-PB | 294 | CG11617-PB | 1..294 | 1..294 | 1596 | 100 | Plus |
CG11617-PA | 294 | CG11617-PA | 1..294 | 1..294 | 1596 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15136-PA | 324 | GI15136-PA | 1..316 | 1..293 | 1050 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25837-PA | 1109 | GL25837-PA | 1..255 | 1..239 | 943 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11100-PA | 322 | GA11100-PA | 1..317 | 1..294 | 1131 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16691-PA | 297 | GM16691-PA | 1..297 | 1..294 | 1518 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22979-PA | 297 | GD22979-PA | 1..297 | 1..294 | 1517 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17252-PA | 318 | GJ17252-PA | 1..312 | 1..294 | 1097 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23761-PA | 324 | GK23761-PA | 4..317 | 2..293 | 996 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16360-PA | 298 | GE16360-PA | 1..298 | 1..294 | 1326 | 89.6 | Plus |
Translation from 73 to 957
> RE08174.hyp MDKSTRPKRNRRHSRRAWPPEEELHPASRATKRLFTPDIKRMLKDWLIRR RENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSEREKAKKSWGH LIKNYNHNARGNVEQFSISSEDSIWEEEMHSCPAEDDEGDDNEEFSSHST GSDGNANNEPSSPYKPILFVGSAGLTERISAQTGGKTKYKHQMMEKYMRD SSTAKTTSQQGTQLNKWLESAAKFTPDRNNYHIEWNMTRQKASSNSSCGQ AIFTTDVSGAGRGGRWMLHHKDELEAAEALANLAFNCRQRWHHI*