Clone RE08410 Report

Search the DGRC for RE08410

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:84
Well:10
Vector:pFlc-1
Associated Gene/Transcriptsvp-RC
Protein status:RE08410.pep: gold
Preliminary Size:1632
Sequenced Size:3918

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11502 2002-01-01 Sim4 clustering to Release 2
CG11502 2002-07-03 Blastp of sequenced clone
CG11502 2003-01-01 Sim4 clustering to Release 3
svp 2008-04-29 Release 5.5 accounting
svp 2008-08-15 Release 5.9 accounting
svp 2008-12-18 5.12 accounting

Clone Sequence Records

RE08410.complete Sequence

3918 bp (3918 high quality bases) assembled on 2002-07-03

GenBank Submission: AY129452

> RE08410.complete
GGGTCGTGTACCTTTTGCCACGAATGTTGTGCCAGTCAGGCTCTAAAAGG
CCTTACGAGAACAGCTGAGATTTCGCTGCTCCGCATGACGCAAAGATACC
GAAATTGAAAAATTTTCAAGTCTTTAAGATATTATATCTCGTGTGTGCGC
CGAGCGGGAAATTAATAAGCAACATCGAAAAAATTCAAAAATTCAAAAAT
AAACCAAGTGTTTTATTAGTGAAGCCAGCTGAAATGTTAACAGCATATGC
AGCTTAAAAGAAAATATTAAATTTATTTTAACATAAAGAAGAAGAATTAT
AACGCGGCTGACAAATACGAATAAAAGGATACAAGTTAAAAGCTAGAGCC
GAGGACTCTATCGAAACCAAAGTGTGAACCGTACCAAGTGCGTACAAAGT
GTATTCCAGCAATTATCCCACGTGTTCCGACCCGGCCGCCAAAATTATTA
CGCACAATTCGCTGAGCGTGTACGGCGGCGGCGTCATGTGCGCCTCCCCG
TCCACGGCTCCCGGCTTCTTCAATCCGCGCCCGCAATCCGGCGCGGAGCT
GTCGGCCTTCGACATCGGCCTGTCCCGCTCGATGGGGCTGGGCGTCCCGC
CACACAGCGCCTGGCACGAACCGCCGGCCTCCCTCGGCGGTCACCTGCAC
GCCGCCTCCGCCGGACCGGGCACCACCACCGGCAGCGTGGCGACGGGCGG
CGGCGGTACCACTCCGAGCAGCGTGGCCAGCCAGCAGTCGGCGGTGATCA
AGCAGGATCTCTCTTGCCCCAGCCTCAATCAGGCGGGATCCGGCCATCAT
CCTGGCATCAAGGAGGATCTGTCCAGCAGCCTGCCCAGCGCCAATGGTGG
ATCCGCCGGTGGCCATCACTCCGGTTCCGGATCGGGTTCCGGTTCGGGCG
TCAATCCCGGACACGGCTCCGACATGCTGCCCCTGATCAAGGGCCATGGC
CAGGACATGCTCACCAGCATCAAGGGACAGCCCACGGGCTGTGGCAGCAC
CACGCCCAGCTCCCAGGCGAATAGCTCCCACTCGCAGAGCAGCAACAGTG
GATCCCAGATCGACAGCAAGCAGAACATCGAGTGCGTCGTCTACGGCGAC
AAGAGTTCCGGCAAGCACTACGGACAATTTACCTGCGAAGGTTGCAAATC
TTTCTTCAAGCGCTCGGTGCGACGTAATCTAACTTACTCTTGCCGCGGCA
GCAGAAACTGTCCCATAGATCAACACCATCGCAATCAATGTCAATATTGT
CGATTGAAGAAGTGCCTCAAAATGGGCATGAGACGCGAAGCTGTTCAACG
TGGACGCGTACCACCCACTCAGCCCGGTCTGGCCGGCATGCATGGGCAGT
ACCAGATTGCCAACGGGGATCCCATGGGCATTGCCGGCTTTAACGGGCAC
TCGTACCTCAGTTCCTACATCTCGCTCCTGCTGCGGGCGGAACCGTATCC
GACTTCGCGATATGGCCAGTGCATGCAACCCAACAACATTATGGGCATCG
ACAACATCTGCGAACTGGCCGCCCGACTGCTCTTCTCGGCGGTCGAGTGG
GCCAAGAACATACCCTTCTTCCCGGAGCTGCAGGTGACCGACCAGGTGGC
CCTGCTCCGGCTCGTCTGGTCAGAGCTCTTCGTCCTAAACGCCAGCCAGT
GCTCCATGCCGCTCCATGTGGCGCCACTGCTGGCCGCCGCCGGACTTCAT
GCCTCCCCGATGGCCGCCGATCGTGTGGTGGCCTTCATGGACCACATCCG
CATCTTCCAGGAGCAGGTGGAGAAGCTGAAGGCGCTGCATGTCGACTCCG
CGGAGTACTCCTGCCTCAAGGCGATCGTGCTCTTCACCACCGATGCCTGC
GGCCTGTCCGATGTGACGCACATTGAATCCCTGCAAGAGAAGTCGCAGTG
CGCCCTCGAGGAATACTGCCGGACCCAGTATCCCAACCAGCCCACGAGAT
TCGGCAAGCTGCTTCTCAGACTGCCATCGCTGCGAACGGTCTCCTCACAA
GTCATTGAGCAATTGTTTTTTGTGCGTCTAGTCGGAAAAACGCCAATTGA
AACGCTGATACGCGATATGCTGCTGAGCGGCAACAGTTTCTCCTGGCCCT
ATCTGCCTTCGATGTGACACACGATGTGGCGCCAATTGACAACAACTTGA
TCATCGGCCGCAGCTGTGGCGGCTGCAACGCTCAACATCAATTCCGGCGG
AGGCGGCATCGGCATCGGCGGCGGGGGCAGTGGCAGTGGCGGTGGCGGTA
GTGGAGGCGGTGGCGGAGTCGTTGGATGTGGCAGCCACAACGTTGTCGCT
GCCAGTCATGACCAGCTCGCCAATGTTGCTGTCATGCAGCAAACATACGG
CAGCGGCGGCAGCAGCAGCAGCAGCATCAGCGGTTGCCACAACGGTAACA
ACGGCAGCGGCGGCAGCATTTGCAATCAGCAGATCAACAACTACGGCAAC
AACAGCAACAACAATGTCGGCAATCATATGAGTGCAGGCAGTTTTTTCGG
TGGGTCCAACAACAGCATCCACAGTAGTGGCAATAGCAATACCGATTATA
TGACCACGCCAGCCACCGCTTATGCGACACCAGCGACAGCAGCCACATCC
ACGGTGAACACCACAACGATGCTGTCTAATTACTGCGATGCCGCCACCAT
GATGATTGGCCGCTGCTGCAGTCAATGCAAATCAATGCCTGCAGCAACAT
CACCAGCGCATGTTGCTCGCGGGCAGCAGCAACAGCAGCAGCAACAACAG
CAGCAGCAACAGCAACGGCGCAGCAGCAATGCCCTCCTCATCCTCGTCTG
GCTCACTGTCATCTGCCTCATCGACCCCAACAGCAACAGCAACTGCGACT
GCAATTGCAACAGCAACAGCAACTGCAGCAGCAACAGCCGCGCAGCAACA
ACAGCAACAATCGCCGCCAAATTTAATCGATATCAGCGAAGTTCCTCTCA
TTGTGGATGTCAAGTAGTGTAATTATTTATGCATCTAGAAATGGGGCTAT
AAACCAACCTTGTAGATACCCCGCCCCGCCCCCACCACTACCACAAAAAC
CATAAAACCCCAAAAAAAAAACAATTGAAAAATGTAAAAAAAAAAAGTTG
GAGGATGAGCGCCGCGTAGCTTAATTGACTAATTTTCCATTTGTAGCTTT
TGTTGTAACTTTGTACATAACTCCTCGAAAAATTCAAGTTTTTCTCTAGG
CCACCCCAGCTGTGAGCAAAACCAATCTCAGCTGACATATCCAAGAGAAC
TTCAAAAGTGAAGCCCCCAAAAAAAGTAAGAAGGCGCCAAAAAAACGTCT
TTACATATGAATGTGTATAATATTTAAATGGCACTGAGTTCTACTTAATT
TTAGACCACAAACACTTGAAAAAATCAATGAAAAAATAAGAATTGTGGAA
AGAGAAAAATCCCCCCTAACACTTTCAAAAGACAAAACATAAAGATAGTT
AAAATATTTATATATGTAATGTAGCATATACACGTATATAGTACATATAT
GAATATATAAACGAAACTCTACTCCCAGTGGTTTGCAGAAATATACCAAA
AATTTTAAGCTATGTTTACTTGATGTGTGGCAATTTTTATGTGTGCTTTA
GCAATTTTATTTTTACTTTAAGTAAAATTTAAAATTTATAAACATTCGAT
TCTCGACTGGTTTTTCTCGGCGGATGTATCTCAAAGATGCTTCTGTATGG
GAAGGCCGAATTGTTGAAATACGAATGCAAAATTTAGCGAATTTTTTATT
TAGTAACCATTACGAGTAAAAACACAAAATGTTCAGTGCAAGTTTCAGTT
CTTAAACGATTTTTTCGTAAGCTTAAGCATTATCTTATTTATGTGTATAG
AGTATGAAAAGTTTTCTATATTTTGTAATAATAAAAATTTGCGTTTATAA
CGAAAAAAAAAAAAAAAA

RE08410.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
svp-RB 4212 svp-RB 146..4048 1..3904 19450 99.9 Plus
svp.a 4334 svp.a 1..3863 41..3904 19250 99.9 Plus
svp-RC 3022 svp-RC 116..2878 1141..3904 13765 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8126283..8128181 2001..3900 9450 99.9 Plus
chr3R 27901430 chr3R 8106498..8107639 1..1142 5695 99.9 Plus
chr3R 27901430 chr3R 8119393..8119946 1289..1842 2770 100 Plus
chr3R 27901430 chr3R 8125876..8126036 1842..2002 805 100 Plus
chr3R 27901430 chr3R 8115594..8115745 1139..1290 760 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:30:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12300885..12302787 2001..3904 9455 99.9 Plus
3R 32079331 3R 12281110..12282251 1..1142 5695 99.9 Plus
3R 32079331 3R 12294006..12294559 1289..1842 2770 100 Plus
3R 32079331 3R 12300478..12300638 1842..2002 805 100 Plus
3R 32079331 3R 12290207..12290358 1139..1290 760 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:17:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12041716..12043618 2001..3904 9465 99.8 Plus
3R 31820162 3R 12021941..12023082 1..1142 5695 99.9 Plus
3R 31820162 3R 12034837..12035390 1289..1842 2770 100 Plus
3R 31820162 3R 12041309..12041469 1842..2002 805 100 Plus
3R 31820162 3R 12031038..12031189 1139..1290 760 100 Plus
Blast to na_te.dros performed 2019-03-15 18:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2939 2337..2907 438 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2207..2819 2299..2910 383 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2856 2358..2908 382 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6950 2340..2599 312 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..7184 2351..2780 291 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2318..2677 2506..2921 276 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2999 2346..2881 240 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..7091 2390..2769 236 55.6 Plus
roo 9092 roo DM_ROO 9092bp 1049..1200 2361..2514 233 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2602..2973 2397..2780 232 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6821..6952 2337..2470 214 65.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2626 2507..2778 173 55.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6911 2425..2617 170 57.9 Plus
roo 9092 roo DM_ROO 9092bp 1049..1147 2370..2473 165 67.6 Plus
roo 9092 roo DM_ROO 9092bp 1076..1171 2507..2601 162 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2984 2428..2619 161 56.5 Plus
blood 7410 blood BLOOD 7410bp 6829..7001 3898..3711 148 60.7 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 895..1064 159..334 143 59.8 Plus
Tirant 8526 Tirant TIRANT 8526bp 7107..7367 3316..3589 141 55.2 Plus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 5965..6033 2427..2494 135 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1582 2393..2463 133 71.8 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7337..7458 2350..2471 123 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1485..1573 2374..2463 122 65.2 Plus
Stalker4 7359 Stalker4 STALKER4 7359bp 1382..1424 255..296 122 79.1 Plus
Stalker 7256 Stalker STALKER 7256bp 1274..1316 255..296 122 79.1 Plus
Porto1 4682 Porto1 DOC5 4682bp 536..616 2414..2495 119 62.2 Plus

RE08410.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:16:45 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8125877..8126034 1843..2000 100 -> Plus
chr3R 8126283..8126476 2001..2194 100 == Plus
chr3R 8126549..8126629 2267..2347 100 == Plus
chr3R 8106504..8107637 7..1140 98 -> Plus
chr3R 8115596..8115745 1141..1290 100 -> Plus
chr3R 8119395..8119946 1291..1842 100 -> Plus
chr3R 8126747..8127003 2465..2722 99 == Plus
chr3R 8127060..8127107 2779..2826 100 == Plus
chr3R 8127224..8127734 2943..3453 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:27:18 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..1632 486..2117 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:17:47 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..1632 486..2117 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:58:14 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RE 1..1665 486..2150 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:08:57 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..1632 486..2117 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:57:33 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RE 1..1665 486..2150 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:27:17 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..3859 43..3902 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:17:47 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..3859 43..3902 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:58:14 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..3859 43..3902 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:08:57 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..3859 43..3902 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:57:33 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
svp-RB 1..3859 43..3902 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:16:45 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12281110..12282249 1..1140 99 -> Plus
3R 12290209..12290358 1141..1290 100 -> Plus
3R 12294008..12294559 1291..1842 100 -> Plus
3R 12300479..12300636 1843..2000 100 -> Plus
3R 12300885..12302785 2001..3902 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:16:45 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12281110..12282249 1..1140 99 -> Plus
3R 12290209..12290358 1141..1290 100 -> Plus
3R 12294008..12294559 1291..1842 100 -> Plus
3R 12300479..12300636 1843..2000 100 -> Plus
3R 12300885..12302785 2001..3902 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:16:45 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12281110..12282249 1..1140 99 -> Plus
3R 12290209..12290358 1141..1290 100 -> Plus
3R 12294008..12294559 1291..1842 100 -> Plus
3R 12300479..12300636 1843..2000 100 -> Plus
3R 12300885..12302785 2001..3902 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:58:14 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8106832..8107971 1..1140 99 -> Plus
arm_3R 8115931..8116080 1141..1290 100 -> Plus
arm_3R 8119730..8120281 1291..1842 100 -> Plus
arm_3R 8126201..8126358 1843..2000 100 -> Plus
arm_3R 8126607..8128507 2001..3902 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:40:58 Download gff for RE08410.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12041716..12043616 2001..3902 99   Plus
3R 12021941..12023080 1..1140 99 -> Plus
3R 12031040..12031189 1141..1290 100 -> Plus
3R 12034839..12035390 1291..1842 100 -> Plus
3R 12041310..12041467 1843..2000 100 -> Plus

RE08410.pep Sequence

Translation from 485 to 2116

> RE08410.pep
MCASPSTAPGFFNPRPQSGAELSAFDIGLSRSMGLGVPPHSAWHEPPASL
GGHLHAASAGPGTTTGSVATGGGGTTPSSVASQQSAVIKQDLSCPSLNQA
GSGHHPGIKEDLSSSLPSANGGSAGGHHSGSGSGSGSGVNPGHGSDMLPL
IKGHGQDMLTSIKGQPTGCGSTTPSSQANSSHSQSSNSGSQIDSKQNIEC
VVYGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRN
QCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIA
GFNGHSYLSSYISLLLRAEPYPTSRYGQCMQPNNIMGIDNICELAARLLF
SAVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLA
AAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLF
TTDACGLSDVTHIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLR
TVSSQVIEQLFFVRLVGKTPIETLIRDMLLSGNSFSWPYLPSM*

RE08410.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17240-PA 826 GF17240-PA 1..541 1..536 2467 90.4 Plus
Dana\GF14359-PA 735 GF14359-PA 172..500 200..532 585 37.8 Plus
Dana\GF15588-PA 702 GF15588-PA 492..691 326..528 379 39.8 Plus
Dana\GF14553-PA 1093 GF14553-PA 764..1093 200..535 347 29.4 Plus
Dana\GF13031-PA 552 GF13031-PA 352..549 339..528 340 42.4 Plus
Dana\GF13031-PA 552 GF13031-PA 80..157 200..276 276 64.1 Plus
Dana\GF15588-PA 702 GF15588-PA 2..93 189..276 258 48.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18706-PA 543 GG18706-PA 1..543 1..543 2877 99.4 Plus
Dere\GG24056-PA 704 GG24056-PA 142..470 200..532 583 37.8 Plus
Dere\GG11781-PA 438 GG11781-PA 31..432 197..528 473 31.6 Plus
Dere\GG25103-PA 693 GG25103-PA 484..683 326..528 383 39.8 Plus
Dere\GG20513-PA 630 GG20513-PA 403..627 319..528 348 40.9 Plus
Dere\GG25103-PA 693 GG25103-PA 2..93 189..276 261 48.9 Plus
Dere\GG20513-PA 630 GG20513-PA 111..236 200..276 223 40.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:48:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17319-PA 542 GH17319-PA 1..542 1..543 2290 85.4 Plus
Dgri\GH13232-PA 774 GH13232-PA 239..567 200..532 582 37.8 Plus
Dgri\GH14219-PA 445 GH14219-PA 31..439 197..528 462 30.5 Plus
Dgri\GH11011-PA 719 GH11011-PA 517..709 333..528 375 40.7 Plus
Dgri\GH10850-PA 1161 GH10850-PA 783..1161 171..535 339 28.4 Plus
Dgri\GH11011-PA 719 GH11011-PA 12..99 193..276 258 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
svp-PE 554 CG11502-PE 1..543 1..543 2865 99.8 Plus
svp-PB 543 CG11502-PB 1..543 1..543 2865 99.8 Plus
svp-PA 746 CG11502-PA 1..452 1..452 2393 99.8 Plus
svp-PC 281 CG11502-PC 1..281 263..543 1458 100 Plus
Hnf4-PB 732 CG9310-PB 28..498 72..532 585 32.9 Plus
Hnf4-PE 704 CG9310-PE 29..470 97..532 583 33.9 Plus
Hnf4-PA 704 CG9310-PA 29..470 97..532 583 33.9 Plus
Hnf4-PF 666 CG9310-PF 6..432 112..532 582 34.4 Plus
Hnf4-PD 708 CG9310-PD 48..474 112..532 582 34.4 Plus
usp-PB 508 CG4380-PB 104..495 200..529 540 33.2 Plus
usp-PA 508 CG4380-PA 104..495 200..529 540 33.2 Plus
tll-PA 452 CG1378-PA 6..446 170..528 445 30 Plus
dsf-PB 691 CG9019-PB 174..681 40..528 417 29.5 Plus
dsf-PA 691 CG9019-PA 174..681 40..528 417 29.5 Plus
Hr51-PC 582 CG16801-PC 355..579 319..528 364 40.9 Plus
Hr38-PD 836 CG1864-PD 479..832 171..531 351 28.2 Plus
Hr38-PB 1078 CG1864-PB 721..1074 171..531 351 28.2 Plus
EcR-PG 878 CG1765-PG 160..637 112..515 334 26.5 Plus
EcR-PB 878 CG1765-PB 160..637 112..515 334 26.5 Plus
Eip75B-PF 1412 CG8127-PF 356..808 113..531 325 26.8 Plus
Eip75B-PE 1412 CG8127-PE 356..808 113..531 325 26.8 Plus
Eip75B-PB 1412 CG8127-PB 356..808 113..531 325 26.8 Plus
EcR-PE 849 CG1765-PE 94..608 51..515 318 24.3 Plus
EcR-PD 849 CG1765-PD 94..608 51..515 318 24.3 Plus
EcR-PA 849 CG1765-PA 94..608 51..515 318 24.3 Plus
EcR-PC 669 CG1765-PC 18..428 168..515 303 26 Plus
Eip78C-PE 862 CG18023-PE 235..447 76..284 300 34.2 Plus
Eip78C-PD 862 CG18023-PD 235..447 76..284 300 34.2 Plus
Eip78C-PA 862 CG18023-PA 235..447 76..284 300 34.2 Plus
Eip75B-PG 991 CG8127-PG 37..387 200..531 300 28.3 Plus
Eip75B-PC 1199 CG8127-PC 245..595 200..531 300 28.3 Plus
ERR-PA 484 CG7404-PA 72..450 161..500 295 26.9 Plus
ERR-PB 496 CG7404-PB 84..462 161..500 295 26.9 Plus
Hr78-PF 601 CG7199-PF 52..162 200..305 292 46.8 Plus
Hr78-PE 601 CG7199-PE 52..162 200..305 292 46.8 Plus
Hr78-PB 601 CG7199-PB 52..162 200..305 292 46.8 Plus
Hr78-PD 601 CG7199-PD 52..162 200..305 292 46.8 Plus
Hr78-PC 601 CG7199-PC 52..162 200..305 292 46.8 Plus
Hr3-PC 694 CG33183-PC 228..339 171..279 284 50 Plus
Hr3-PI 871 CG33183-PI 405..516 171..279 284 50 Plus
Hr3-PF 487 CG33183-PF 8..130 157..279 283 44.7 Plus
Hr3-PA 487 CG33183-PA 8..130 157..279 283 44.7 Plus
Hr3-PH 529 CG33183-PH 8..130 157..279 283 44.7 Plus
Hr78-PA 599 CG7199-PA 52..160 200..305 283 45 Plus
Hr51-PC 582 CG16801-PC 85..188 178..276 282 55.8 Plus
ftz-f1-PB 1027 CG4059-PB 374..583 18..275 282 31.8 Plus
ftz-f1-PC 803 CG4059-PC 177..359 90..275 275 36.3 Plus
ftz-f1-PA 803 CG4059-PA 177..359 90..275 275 36.3 Plus
ftz-f1-PD 853 CG4059-PD 177..359 90..275 275 36.3 Plus
Hr3-PD 456 CG33183-PD 20..101 198..279 260 56.1 Plus
Hr83-PA 278 CG10296-PA 7..254 200..499 257 29.7 Plus
dsf-PB 691 CG9019-PB 2..93 189..276 254 48.9 Plus
dsf-PA 691 CG9019-PA 2..93 189..276 254 48.9 Plus
Hr4-PC 1518 CG43934-PC 756..997 77..276 248 30.3 Plus
ftz-f1-PB 1027 CG4059-PB 833..1021 341..529 201 28.1 Plus
ftz-f1-PC 803 CG4059-PC 609..797 341..529 201 28.1 Plus
ftz-f1-PA 803 CG4059-PA 609..797 341..529 201 28.1 Plus
ftz-f1-PD 853 CG4059-PD 659..847 341..529 201 28.1 Plus
Hr78-PF 601 CG7199-PF 389..598 333..534 189 25.1 Plus
Hr78-PE 601 CG7199-PE 389..598 333..534 189 25.1 Plus
Hr78-PB 601 CG7199-PB 389..598 333..534 189 25.1 Plus
Hr78-PD 601 CG7199-PD 389..598 333..534 189 25.1 Plus
Hr78-PC 601 CG7199-PC 389..598 333..534 189 25.1 Plus
Hr78-PA 599 CG7199-PA 387..596 333..534 189 25.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:48:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10282-PA 812 GI10282-PA 1..530 1..534 2248 86.8 Plus
Dmoj\GI12430-PA 715 GI12430-PA 174..502 200..532 584 37.5 Plus
Dmoj\GI22125-PA 450 GI22125-PA 31..444 197..528 457 31 Plus
Dmoj\GI17531-PA 736 GI17531-PA 534..726 333..528 376 40.7 Plus
Dmoj\GI19631-PA 981 GI19631-PA 531..981 114..535 353 27.1 Plus
Dmoj\GI17531-PA 736 GI17531-PA 2..93 189..276 260 48.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22274-PA 777 GL22274-PA 1..532 1..536 2263 84.9 Plus
Dper\GL26219-PA 518 GL26219-PA 144..472 200..532 570 37.8 Plus
Dper\GL19043-PA 819 GL19043-PA 615..807 333..528 365 40.2 Plus
Dper\GL17753-PA 259 GL17753-PA 59..256 339..528 329 42.2 Plus
Dper\GL15129-PA 359 GL15129-PA 93..293 200..370 308 35.6 Plus
Dper\GL19043-PA 819 GL19043-PA 134..221 193..276 256 50 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11038-PA 777 GA11038-PA 1..532 1..536 2257 84.9 Plus
Dpse\GA21689-PA 686 GA21689-PA 144..472 200..532 577 37.8 Plus
Dpse\GA18146-PA 487 GA18146-PA 93..476 200..531 562 33.8 Plus
Dpse\GA21482-PA 691 GA21482-PA 487..679 333..528 371 40.2 Plus
Dpse\GA30480-PA 626 GA30480-PA 426..623 339..528 342 41.9 Plus
Dpse\GA30480-PA 626 GA30480-PA 153..230 200..276 275 64.1 Plus
Dpse\GA21482-PA 691 GA21482-PA 2..93 189..276 258 48.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24010-PA 1085 GM24010-PA 1..459 1..452 2358 96.3 Plus
Dsec\GM12759-PA 703 GM12759-PA 141..469 200..532 584 37.5 Plus
Dsec\GM24010-PA 1085 GM24010-PA 748..835 453..540 445 93.2 Plus
Dsec\GM18580-PA 196 GM18580-PA 4..186 343..528 353 42.9 Plus
Dsec\GM23314-PA 1075 GM23314-PA 718..1075 171..535 348 28.2 Plus
Dsec\GM18927-PA 505 GM18927-PA 101..175 200..274 295 64 Plus
Dsec\GM18927-PA 505 GM18927-PA 258..483 315..520 292 31.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:49:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18809-PA 680 GD18809-PA 1..540 1..540 2837 98.5 Plus
Dsim\GD22387-PA 703 GD22387-PA 141..475 200..538 582 37.1 Plus
Dsim\GD11109-PA 414 GD11109-PA 111..411 200..528 526 40 Plus
Dsim\GD21550-PA 452 GD21550-PA 31..446 197..528 459 30.3 Plus
Dsim\GD21688-PA 556 GD21688-PA 227..556 200..535 336 28.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11090-PA 787 GJ11090-PA 1..529 1..534 2242 86.2 Plus
Dvir\GJ17882-PA 679 GJ17882-PA 142..470 200..532 583 38.1 Plus
Dvir\tll-PA 450 GJ24246-PA 31..444 197..528 459 30.2 Plus
Dvir\GJ15408-PA 726 GJ15408-PA 511..716 315..528 380 39.6 Plus
Dvir\GJ14974-PA 577 GJ14974-PA 376..574 339..528 349 43.2 Plus
Dvir\GJ14974-PA 577 GJ14974-PA 99..176 200..276 275 64.1 Plus
Dvir\GJ15408-PA 726 GJ15408-PA 2..93 189..276 262 48.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:49:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11542-PA 835 GK11542-PA 1..534 1..536 2254 86.5 Plus
Dwil\GK18664-PA 691 GK18664-PA 129..457 200..532 584 37.8 Plus
Dwil\GK25746-PA 483 GK25746-PA 91..470 200..531 559 35.1 Plus
Dwil\GK21006-PA 192 GK21006-PA 1..191 1..219 443 62.4 Plus
Dwil\GK14705-PA 730 GK14705-PA 523..720 328..528 379 40.2 Plus
Dwil\GK14705-PA 730 GK14705-PA 2..93 189..276 261 48.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26169-PA 543 GE26169-PA 1..543 1..543 2877 99.4 Plus
Dyak\GE10817-PA 703 GE10817-PA 141..475 200..538 576 37.1 Plus
Dyak\GE10907-PA 452 GE10907-PA 31..446 197..528 458 30.3 Plus
Dyak\GE25723-PA 691 GE25723-PA 482..681 326..528 381 39.8 Plus
Dyak\GE13549-PA 1059 GE13549-PA 730..1059 200..535 343 28.8 Plus
Dyak\GE25723-PA 691 GE25723-PA 2..93 189..276 260 48.9 Plus

RE08410.hyp Sequence

Translation from 485 to 2116

> RE08410.hyp
MCASPSTAPGFFNPRPQSGAELSAFDIGLSRSMGLGVPPHSAWHEPPASL
GGHLHAASAGPGTTTGSVATGGGGTTPSSVASQQSAVIKQDLSCPSLNQA
GSGHHPGIKEDLSSSLPSANGGSAGGHHSGSGSGSGSGVNPGHGSDMLPL
IKGHGQDMLTSIKGQPTGCGSTTPSSQANSSHSQSSNSGSQIDSKQNIEC
VVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRN
QCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIA
GFNGHSYLSSYISLLLRAEPYPTSRYGQCMQPNNIMGIDNICELAARLLF
SAVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLA
AAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLF
TTDACGLSDVTHIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLR
TVSSQVIEQLFFVRLVGKTPIETLIRDMLLSGNSFSWPYLPSM*

RE08410.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
svp-PE 554 CG11502-PE 1..543 1..543 2876 100 Plus
svp-PB 543 CG11502-PB 1..543 1..543 2876 100 Plus
svp-PA 746 CG11502-PA 1..452 1..452 2404 100 Plus
svp-PC 281 CG11502-PC 1..281 263..543 1458 100 Plus
Hnf4-PF 666 CG9310-PF 6..432 112..532 593 34.6 Plus