BDGP Sequence Production Resources |
Search the DGRC for RE08772
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 87 |
Well: | 72 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG30419-RA |
Protein status: | RE08772.pep: gold |
Preliminary Size: | 813 |
Sequenced Size: | 3821 |
Gene | Date | Evidence |
---|---|---|
CG13573 | 2002-01-01 | Sim4 clustering to Release 2 |
CG30419 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30419 | 2003-08-11 | Blastp of sequenced clone |
CG30419 | 2008-04-29 | Release 5.5 accounting |
CG30419 | 2008-08-15 | Release 5.9 accounting |
CG30419 | 2008-12-18 | 5.12 accounting |
3821 bp (3821 high quality bases) assembled on 2003-08-11
GenBank Submission: BT010276
> RE08772.complete AGTGGCTCGCTGACTTTGTGCTGTGAACTTCGACGCGCTGGAAGGTCCTG CGAAGTTTTCGCATTTCCTTTGCTGGTGTGGAAGCGACGTGTTTTGTGAG TGCGCGTGTGTGTGTCTGTGAGAGGGCGCCAACTTTTCGGTGAGACTTTA ACCACCAGTAAACAACAACAAAGCAAAAACATTGACAAAAAAGCAAGAAA GGCGGAAAGGACACAAGGACACAGCCTGCGGTCAGGGAAACCGCAATCAA AAATTGTAAACAAACACTGGAAATCGAGCGAAATCAACAAAGGAAGTCGA CGCCGCCCTGTAGGCAACGATTCCGCTGCTAGCCAACATGGAAATGGACG TCAATCGCCCGACCGGCCGCCATGGCAACCTAATGACCATATCCGCCCGC TGCTCCAACAACAATGCAGCCGAAGCCGGAGCCGGAGTTGGAGCCACCAG GACTCCGGCCGCCGGAAGTGAGGCGCCGCCCAGCGGCTGCTGCGGCATCT TGGGCCGCCTCCTCTGCGTGAGTCGCCACAAGGCCACGCAATCGGTGGCG GGCAGCGATCCCTTCTCCCAGCTGCAGTTGCAGCGCAAGGGAGTCGCCAC ACCTGCTGCCGTTTCCGGACAGCGACGCCGCCGGACGCCGCAGGAAATCT ACTTCGAGAGTCGCGGCAAGTCCTGCAAGAAGCTGCTTAAATTCAATGGC AATTCCAACAAGATACTGCTGTATCCCGAGGAGGGCTGGGCGAGGACCGC CTCATCCAGTTACTGGACCATCACGCCCTGCTTCTGGCAGCCCAATCGCT GCCGCATCGTCGAGTGCTCCGGAACCCAACGGCGCGCGACGAAAGCCCGG ATGCTGCCGCTGGAGCAGCAGGGATCCCTCCTGATTGCCGGACACTTTCG CCGGACGACGGCGGGGGGCGGAGGAGCTGCATCGCCAGCGGGGGGCGGGG CATCGGGCAACGGTTCGGTGGCTGCCACGCCCACGCCCGCAATACCTGCC GATGCAATCCGGACGGGGTCAACGGGCTGTGACAAGTCGCAGCCCGCGTG GAACGACGAGTTCAAGCTGTATCTGACGTCGAACATCTCGATGGAGGACT ACAACATGGGCTACTGCCTCACCGGATTCGTGGAGCGCCGCTGCCAGGTG ACCAACACCTTCCAGATGACTCACTTTGCGGTCATCAAGCGCCAGTGGCC ACCGTCGCCGTCCAACCTGGGCAACTCCTAAGGCCCGTGCATCCCACTTT TGTAATTGTGATCCGACCTTTTGTTCCCAATTGGAAACGAAATGAAATTA ACTAAGGGACAGTGGCTGTTTTCACTTTTAGAGAATTTTCTGAATATTTC CAGAATGCAGAAATGTTCAGAAATTCAGAATGTTTGAGAGTGAGAACAGA CACAGTCCTTTAATGCAGCAAATACCAATTAAGTTTTTAGCATCTAAGTA GAGCCAAAATGTTTGTTGTGCAATCCCGAACTAAAATCAAAAGAAGTTTC GCCAGGTCTATAGAAAATGTAACATAAAATTGCCGAGGCGTCGAGAACCG ATAGCCACTAGATCGTAAGGCTTAGAAAAGTATTGGCGGAGGGGATCTTT AAGGACGTACTGCATTTGCCGTAGTTTTACGAAATTTTCTGCATGTTTAG TGCGTAAATTGTAATTTTAACTAAATGTGCAACAGAAATCCGAAAATAAG GAGGAAACTAGGAAACAAAAACTTTACGTGTGCTTTCAGTGTTGTGTAAT ATGAAAAACGGAAACAAACCGGAAAAAATAAGCGAAAAAACCAAATACTA GTAACTGTTAAATGCTAAATGAAACTAAACCGCTTTGCCAACTCTCACAC ACACACACAGCAACACATAGTAGCACCAACACGCAGGCACCCACTTACAC ACTCGCACACTTAAGCCTGGACGGCTACTTAATGCTTCAAAAAGTGCAAC AAATTGAAACTTGTGCTTGTCGAAGCATGTGATTGTGAGTGCTCCACTGT AAGCTGCTATGCTATAGTATACAAGTTTACGAGGCTGTGTGTGTGTGTGT GTGCGAGCTGGTACTCTTTTCTACTACATACGAATATGTACTTTAACGGC CATGTTTGCGAAACCTATTGCCTTTAAGCTTTAAAATATAAGCACAACTC AACGCAGGCAAGCAAGTCAAAAGCTTCGAGCGATGGCCATTGGCACTGAG CAGCAGTTTGATGACGAGCGAGCATTAAAGTTAATTATTTAACGAGCTGT TTAAGGCAAACAAACATGTTAAAGCCGATTTGCTGTTTTTAGCTCTCTGC ATGGGCACATTGCACCCTAGGCATGCTTCTCTTGGAGCCTTGGTCACACT GCTATTCATATGATATGGAATGCGTGGAAAGCGTGTGGAATAAGTTCTAG AAACCTGCTGATTAGTGCCACTGGCCATTTAGCCGACTCGTCCAAAACCG AGTTTGCCAACTCTACGCTAATCTAAGGAACTAAACCTCTAACTCTCTCT CTCTATCTTTCTCTCACTAACTCACTAACCCACTGACCCACTCGTGCTAC GGCTCTATCCCTCTTATTCACTCACTTTGAGCATGATACGCAACGTATAT CAACAATTCGTCCAATGATTGGAGTCTTTTGGCGCCACAAATTGCCACGT GTCAAGTTGGTAAGGCCGGAGCTCCAATTGCCAAAAACCCTAAGTGTTAA AAAACAATGAAACCAAACGTAAAGGAAACCAAAGCTAAGTCAAAACTCAA CGTAGGCTAAGGATAGTTTAAAAATCCATATTTACAAGCTAGAATATGAA TCTATATATATTATATAAATATATATCTATATATTTGTGTGTAGGCTGAA CCTTTTTGCGTATATGTATATCTGTGTATTTGTATAACTGTATTGCGATT GCATATACAATAACATTTTTGCCGTAGTTCGCATAGCTCGCTTTTAGGCG CTTTTACACGCAAGCGAATAAGGCCGAAACCTCTTAACTCCCTTTTTTTG CTTCACTCAAGATGTCCCTGCCACCCTGCCCCAAAAACTTATCGATATTT AAGTATCAGGTACCTGCCACAATCAACACGAAAACCAAGTAAACAGAAAA ACTCGAGTATACATAACTATTTATTGAACAATTACGTCTGTGCAAATATT TGTGTCCATTTTAATTAGGGAGAATGCAAAGATTTCCAAAGAAGCATAGT ATTTTTTAGGTAACGAAACACTCTGTCCCGAAAACCCGCAAATCGATGTC GTACACCCGAGTTGTATAAATGTTTATTAGGGATTCTCGCTCTCTGTGTG TAGCAAATACTTCTGCGCCAATGCTTAAAAACCCAACACAGACACGAGTT GTTTGGCTTAAAGCTGAATGTCCATGTCCAAACCGAAACAAAACACGCAT GAGCTTTTTTGTAGTTCTATTTAAACACTTTAAATAGCAAACGAGTCAAC AAACAATTCCGTGCTGCGGAGCACGGGGAATAAATTAATGTTAAGCTTCT ATCGAAATAAGCGATGTAAGCGAGCATAATTAGTCTAATCGAGAGATAAG GTAAAGCGGTAGAAAAAAAACGCCAGCAAAAAGCAAATCAAATCAGACGG AAATGCAAAATGCAAATGAAAATATAAATCGAAATCAAACACGCCGCTCT GTTAATGCAAGTGCATAAATCAAAAGCGAATAAGGCCTCGGCAAATGCAA TTTGAGCTGGCATTCGGATTCGTGTAATGAAAATAAATACCCCAAAGGTA TGTAGAGTGCAGTTGAACATGGGAAATCAAAACATTGAAAATAAAAAAAA GGAAAGCAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20098512..20101596 | 713..3792 | 98 | <- | Minus |
chr2R | 20115106..20115818 | 1..712 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..894 | 338..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..894 | 338..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..894 | 338..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..894 | 338..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..894 | 338..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..1232 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..3790 | 3..3792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 5..3797 | 1..3792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 1..1232 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30419-RA | 5..3797 | 1..3792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24212506..24215585 | 713..3792 | 99 | <- | Minus |
2R | 24229079..24229791 | 1..712 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24212506..24215585 | 713..3792 | 99 | <- | Minus |
2R | 24229079..24229791 | 1..712 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24212506..24215585 | 713..3792 | 99 | <- | Minus |
2R | 24229079..24229791 | 1..712 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20100029..20103108 | 713..3792 | 99 | <- | Minus |
arm_2R | 20116602..20117314 | 1..712 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24213723..24216802 | 713..3792 | 99 | <- | Minus |
2R | 24230296..24231008 | 1..712 | 99 | Minus |
Translation from 337 to 1230
> RE08772.hyp MEMDVNRPTGRHGNLMTISARCSNNNAAEAGAGVGATRTPAAGSEAPPSG CCGILGRLLCVSRHKATQSVAGSDPFSQLQLQRKGVATPAAVSGQRRRRT PQEIYFESRGKSCKKLLKFNGNSNKILLYPEEGWARTASSSYWTITPCFW QPNRCRIVECSGTQRRATKARMLPLEQQGSLLIAGHFRRTTAGGGGAASP AGGGASGNGSVAATPTPAIPADAIRTGSTGCDKSQPAWNDEFKLYLTSNI SMEDYNMGYCLTGFVERRCQVTNTFQMTHFAVIKRQWPPSPSNLGNS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30419-PA | 297 | CG30419-PA | 1..297 | 1..297 | 1586 | 100 | Plus |
Translation from 337 to 1230
> RE08772.pep MEMDVNRPTGRHGNLMTISARCSNNNAAEAGAGVGATRTPAAGSEAPPSG CCGILGRLLCVSRHKATQSVAGSDPFSQLQLQRKGVATPAAVSGQRRRRT PQEIYFESRGKSCKKLLKFNGNSNKILLYPEEGWARTASSSYWTITPCFW QPNRCRIVECSGTQRRATKARMLPLEQQGSLLIAGHFRRTTAGGGGAASP AGGGASGNGSVAATPTPAIPADAIRTGSTGCDKSQPAWNDEFKLYLTSNI SMEDYNMGYCLTGFVERRCQVTNTFQMTHFAVIKRQWPPSPSNLGNS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13469-PA | 317 | GF13469-PA | 1..317 | 1..297 | 1140 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19944-PA | 294 | GG19944-PA | 1..294 | 1..297 | 1523 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20909-PA | 303 | GH20909-PA | 1..290 | 1..287 | 931 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30419-PA | 297 | CG30419-PA | 1..297 | 1..297 | 1586 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18347-PA | 316 | GI18347-PA | 1..316 | 1..297 | 932 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20522-PA | 363 | GL20522-PA | 1..363 | 1..297 | 828 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25119-PA | 306 | GA25119-PA | 1..306 | 1..297 | 1040 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18262-PA | 297 | GM18262-PA | 1..297 | 1..297 | 1559 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24967-PA | 188 | GD24967-PA | 14..188 | 123..297 | 923 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20744-PA | 300 | GJ20744-PA | 1..288 | 1..287 | 951 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15809-PA | 310 | GK15809-PA | 1..310 | 1..297 | 959 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11473-PA | 294 | GE11473-PA | 1..294 | 1..297 | 1488 | 95.3 | Plus |