BDGP Sequence Production Resources |
Search the DGRC for RE08857
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 88 |
Well: | 57 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Mob3-RA |
Protein status: | RE08857.pep: gold |
Preliminary Size: | 834 |
Sequenced Size: | 926 |
Gene | Date | Evidence |
---|---|---|
CG4946 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4946 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4946 | 2003-01-24 | Blastp of sequenced clone |
CG4946 | 2008-04-29 | Release 5.5 accounting |
Mob3 | 2008-08-15 | Release 5.9 accounting |
Mob3 | 2008-12-18 | 5.12 accounting |
926 bp (926 high quality bases) assembled on 2003-01-24
GenBank Submission: AY071000
> RE08857.complete TGGGTTTCTCCCATCTCTCCATCGGCATAAAAATACAGAATAGTCTAAGG AACTGAATAAATGTAAACATTATTTATAAACAGCCATTAATAGTTATTCA ATTGACAAACTTTTGTGCTGTAAGCAGCGCTTACATATGTGCCAAAATAT TCTCACAACCAACAGAATCTCCAACAAGATATTATGGCTTTAAATGGATT TTTAGAGTTCTTCCAAAAGGGCAAGACCTTTAGGCCAAAAAAGCCATTTG CCTCCGGAACCATTAGGTATTCCTTACATAAGCAAGCCCAGGCCAGTTTG CAATCCGGGATTAATCTGCGGCAAGTGGTGCGTTTGCCGCAAGGGGAGAA TCTCAACGACTGGCTAGCTGTGCACGTTGTGGACTTCTTCAATCGCATAA ACTTGATCTACGGCACCGTTTCGGAGTTTTGCAACGAAACTACGTGTCCC ACGATGTCTGGCGGTTCCAGATATGAGTACTTATGGGCCGATGGAGATCT ATACAAAAAGCCAACCGCCCTTTCAGCCCAAAAGTACATTGAGCATTTAA TGGACTGGATTGAGACACAAATTAACAACGAAGCTGTTTTTCCAGTGTCC ACGGATGTTCCATTTCCCAAGAACTTCATAGCAATAAGTCGTAAAATTTT AACCCGTCTTTTTCGTGTTTTCGTCCACGTCTATATTCACCATTTCGATC GGATTGTGAGCATTGGAGCGGAAGCTCACGTGAATGCCTGCTACAAACAT TTTTACTACTTTGTGCAAGAATTTGACATGATTTCGGCCAAGGAATTGGA ACCCCTACAAGAAATGACATCTCGAATTTGCAAGGATAAGGATTGAAAGT AATTCGTACTAGATTGTGATGTAAATATGTATTGTTTATTACAAAATAAA TAAGCGAACACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mob3-RA | 1085 | Mob3-RA | 103..1014 | 3..914 | 4545 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10264195..10264417 | 3..225 | 1100 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 10265235..10265426 | 720..911 | 960 | 100 | Plus |
chr2L | 23010047 | chr2L | 10264475..10264627 | 224..376 | 765 | 100 | Plus |
chr2L | 23010047 | chr2L | 10264682..10264806 | 376..500 | 625 | 100 | Plus |
chr2L | 23010047 | chr2L | 10265053..10265170 | 604..721 | 590 | 100 | Plus |
chr2L | 23010047 | chr2L | 10264863..10264966 | 501..604 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10265339..10265561 | 3..225 | 1100 | 99.6 | Plus |
2L | 23513712 | 2L | 10266379..10266573 | 720..914 | 975 | 100 | Plus |
2L | 23513712 | 2L | 10265619..10265771 | 224..376 | 765 | 100 | Plus |
2L | 23513712 | 2L | 10265826..10265950 | 376..500 | 625 | 100 | Plus |
2L | 23513712 | 2L | 10266197..10266314 | 604..721 | 590 | 100 | Plus |
2L | 23513712 | 2L | 10266007..10266110 | 501..604 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10265339..10265561 | 3..225 | 1100 | 99.5 | Plus |
2L | 23513712 | 2L | 10266379..10266573 | 720..914 | 975 | 100 | Plus |
2L | 23513712 | 2L | 10265619..10265771 | 224..376 | 765 | 100 | Plus |
2L | 23513712 | 2L | 10265826..10265950 | 376..500 | 625 | 100 | Plus |
2L | 23513712 | 2L | 10266197..10266314 | 604..721 | 590 | 100 | Plus |
2L | 23513712 | 2L | 10266007..10266110 | 501..604 | 520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10264194..10264417 | 1..225 | 99 | -> | Plus |
chr2L | 10264477..10264627 | 226..376 | 100 | -> | Plus |
chr2L | 10264683..10264806 | 377..500 | 100 | -> | Plus |
chr2L | 10264863..10264966 | 501..604 | 100 | -> | Plus |
chr2L | 10265054..10265169 | 605..720 | 100 | -> | Plus |
chr2L | 10265236..10265426 | 721..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 1..663 | 184..846 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 1..663 | 184..846 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 1..663 | 184..846 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 1..663 | 184..846 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 1..663 | 184..846 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 2..910 | 3..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 1..909 | 3..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 3..912 | 1..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 2..910 | 3..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mob3-RA | 3..912 | 1..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10265338..10265561 | 1..225 | 99 | -> | Plus |
2L | 10265621..10265771 | 226..376 | 100 | -> | Plus |
2L | 10265827..10265950 | 377..500 | 100 | -> | Plus |
2L | 10266007..10266110 | 501..604 | 100 | -> | Plus |
2L | 10266198..10266313 | 605..720 | 100 | -> | Plus |
2L | 10266380..10266570 | 721..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10265338..10265561 | 1..225 | 99 | -> | Plus |
2L | 10265621..10265771 | 226..376 | 100 | -> | Plus |
2L | 10265827..10265950 | 377..500 | 100 | -> | Plus |
2L | 10266007..10266110 | 501..604 | 100 | -> | Plus |
2L | 10266198..10266313 | 605..720 | 100 | -> | Plus |
2L | 10266380..10266570 | 721..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10265338..10265561 | 1..225 | 99 | -> | Plus |
2L | 10265621..10265771 | 226..376 | 100 | -> | Plus |
2L | 10265827..10265950 | 377..500 | 100 | -> | Plus |
2L | 10266007..10266110 | 501..604 | 100 | -> | Plus |
2L | 10266198..10266313 | 605..720 | 100 | -> | Plus |
2L | 10266380..10266570 | 721..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10265827..10265950 | 377..500 | 100 | -> | Plus |
arm_2L | 10265338..10265561 | 1..225 | 99 | -> | Plus |
arm_2L | 10265621..10265771 | 226..376 | 100 | -> | Plus |
arm_2L | 10266007..10266110 | 501..604 | 100 | -> | Plus |
arm_2L | 10266198..10266313 | 605..720 | 100 | -> | Plus |
arm_2L | 10266380..10266570 | 721..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10265827..10265950 | 377..500 | 100 | -> | Plus |
2L | 10266007..10266110 | 501..604 | 100 | -> | Plus |
2L | 10266198..10266313 | 605..720 | 100 | -> | Plus |
2L | 10266380..10266570 | 721..911 | 100 | Plus | |
2L | 10265338..10265561 | 1..225 | 99 | -> | Plus |
2L | 10265621..10265771 | 226..376 | 100 | -> | Plus |
Translation from 183 to 845
> RE08857.hyp MALNGFLEFFQKGKTFRPKKPFASGTIRYSLHKQAQASLQSGINLRQVVR LPQGENLNDWLAVHVVDFFNRINLIYGTVSEFCNETTCPTMSGGSRYEYL WADGDLYKKPTALSAQKYIEHLMDWIETQINNEAVFPVSTDVPFPKNFIA ISRKILTRLFRVFVHVYIHHFDRIVSIGAEAHVNACYKHFYYFVQEFDMI SAKELEPLQEMTSRICKDKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mob3-PA | 220 | CG4946-PA | 1..220 | 1..220 | 1170 | 100 | Plus |
mats-PC | 219 | CG13852-PC | 3..211 | 6..215 | 612 | 52.9 | Plus |
mats-PB | 219 | CG13852-PB | 3..211 | 6..215 | 612 | 52.9 | Plus |
mats-PA | 219 | CG13852-PA | 3..211 | 6..215 | 612 | 52.9 | Plus |
Mob2-PC | 431 | CG11711-PC | 35..200 | 44..211 | 322 | 35.7 | Plus |
Translation from 183 to 845
> RE08857.pep MALNGFLEFFQKGKTFRPKKPFASGTIRYSLHKQAQASLQSGINLRQVVR LPQGENLNDWLAVHVVDFFNRINLIYGTVSEFCNETTCPTMSGGSRYEYL WADGDLYKKPTALSAQKYIEHLMDWIETQINNEAVFPVSTDVPFPKNFIA ISRKILTRLFRVFVHVYIHHFDRIVSIGAEAHVNACYKHFYYFVQEFDMI SAKELEPLQEMTSRICKDKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15759-PA | 220 | GF15759-PA | 1..220 | 1..220 | 1177 | 97.7 | Plus |
Dana\GF18448-PA | 221 | GF18448-PA | 1..213 | 1..215 | 628 | 52.1 | Plus |
Dana\GF24543-PA | 545 | GF24543-PA | 139..304 | 44..211 | 332 | 35.7 | Plus |
Dana\GF13799-PA | 223 | GF13799-PA | 53..206 | 44..205 | 148 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10099-PA | 220 | GG10099-PA | 1..220 | 1..220 | 1191 | 99.5 | Plus |
Dere\GG11134-PA | 219 | GG11134-PA | 3..211 | 6..215 | 624 | 52.9 | Plus |
Dere\GG13915-PA | 542 | GG13915-PA | 135..300 | 44..211 | 332 | 35.7 | Plus |
Dere\GG10811-PA | 223 | GG10811-PA | 53..206 | 44..205 | 149 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13517-PA | 220 | GH13517-PA | 1..220 | 1..220 | 1116 | 91.4 | Plus |
Dgri\GH13388-PA | 219 | GH13388-PA | 3..211 | 6..215 | 625 | 52.4 | Plus |
Dgri\GH16639-PA | 504 | GH16639-PA | 67..232 | 44..211 | 329 | 35.7 | Plus |
Dgri\GH20146-PA | 223 | GH20146-PA | 53..206 | 44..205 | 150 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mob3-PA | 220 | CG4946-PA | 1..220 | 1..220 | 1170 | 100 | Plus |
mats-PC | 219 | CG13852-PC | 3..211 | 6..215 | 612 | 52.9 | Plus |
mats-PB | 219 | CG13852-PB | 3..211 | 6..215 | 612 | 52.9 | Plus |
mats-PA | 219 | CG13852-PA | 3..211 | 6..215 | 612 | 52.9 | Plus |
Mob2-PC | 431 | CG11711-PC | 35..200 | 44..211 | 322 | 35.7 | Plus |
Mob2-PE | 537 | CG11711-PE | 141..306 | 44..211 | 322 | 35.7 | Plus |
Mob2-PB | 537 | CG11711-PB | 141..306 | 44..211 | 322 | 35.7 | Plus |
Mob2-PD | 566 | CG11711-PD | 170..335 | 44..211 | 322 | 35.7 | Plus |
Mob2-PA | 728 | CG11711-PA | 332..497 | 44..211 | 322 | 35.7 | Plus |
Mob4-PB | 227 | CG3403-PB | 53..210 | 44..205 | 155 | 24.4 | Plus |
Mob4-PA | 223 | CG3403-PA | 53..206 | 44..205 | 149 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18135-PA | 221 | GI18135-PA | 1..220 | 1..220 | 1105 | 90.5 | Plus |
Dmoj\GI22385-PA | 219 | GI22385-PA | 3..211 | 6..215 | 631 | 52.9 | Plus |
Dmoj\GI11596-PA | 1030 | GI11596-PA | 142..307 | 44..211 | 322 | 35.7 | Plus |
Dmoj\GI20237-PA | 223 | GI20237-PA | 53..206 | 44..205 | 150 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18994-PA | 220 | GL18994-PA | 1..220 | 1..220 | 1099 | 90 | Plus |
Dper\GL24215-PA | 219 | GL24215-PA | 3..211 | 6..215 | 625 | 52.4 | Plus |
Dper\GL22820-PA | 395 | GL22820-PA | 1..116 | 91..211 | 170 | 32.2 | Plus |
Dper\GL10986-PA | 223 | GL10986-PA | 53..206 | 44..205 | 146 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26541-PA | 219 | GA26541-PA | 3..211 | 6..215 | 625 | 52.4 | Plus |
Dpse\GA11155-PA | 562 | GA11155-PA | 131..296 | 44..211 | 332 | 35.7 | Plus |
Dpse\GA17429-PA | 223 | GA17429-PA | 53..206 | 44..205 | 146 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18081-PA | 220 | GM18081-PA | 1..220 | 1..220 | 1191 | 99.1 | Plus |
Dsec\GM26432-PA | 219 | GM26432-PA | 3..211 | 6..215 | 623 | 52.9 | Plus |
Dsec\GM24744-PA | 564 | GM24744-PA | 134..299 | 44..211 | 331 | 35.7 | Plus |
Dsec\GM20860-PA | 223 | GM20860-PA | 53..206 | 44..205 | 149 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23671-PA | 220 | GD23671-PA | 1..220 | 1..220 | 1185 | 98.6 | Plus |
Dsim\GD20949-PA | 219 | GD20949-PA | 3..211 | 6..215 | 623 | 52.9 | Plus |
Dsim\GD12801-PA | 540 | GD12801-PA | 141..306 | 44..211 | 332 | 35.7 | Plus |
Dsim\GD10311-PA | 223 | GD10311-PA | 53..206 | 44..205 | 157 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14867-PA | 220 | GJ14867-PA | 1..220 | 1..220 | 1109 | 90.5 | Plus |
Dvir\GJ24418-PA | 221 | GJ24418-PA | 1..213 | 1..215 | 630 | 52.6 | Plus |
Dvir\GJ11275-PA | 560 | GJ11275-PA | 141..306 | 44..211 | 329 | 35.7 | Plus |
Dvir\GJ20189-PA | 223 | GJ20189-PA | 53..206 | 44..205 | 150 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13074-PA | 221 | GK13074-PA | 5..213 | 6..215 | 637 | 53.3 | Plus |
Dwil\GK18525-PA | 106 | GK18525-PA | 1..106 | 1..106 | 516 | 87.7 | Plus |
Dwil\GK17021-PA | 597 | GK17021-PA | 152..317 | 44..211 | 327 | 35.7 | Plus |
Dwil\GK23144-PA | 224 | GK23144-PA | 53..206 | 44..205 | 146 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18913-PA | 220 | GE18913-PA | 1..220 | 1..220 | 1191 | 99.5 | Plus |
Dyak\GE10299-PA | 219 | GE10299-PA | 3..211 | 6..215 | 623 | 52.9 | Plus |
Dyak\GE20209-PA | 539 | GE20209-PA | 133..298 | 44..211 | 332 | 35.7 | Plus |
Dyak\GE24587-PA | 223 | GE24587-PA | 53..206 | 44..205 | 150 | 23.5 | Plus |