BDGP Sequence Production Resources |
Search the DGRC for RE08932
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 89 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31259-RA |
Protein status: | RE08932.pep: gold |
Preliminary Size: | 2667 |
Sequenced Size: | 1933 |
Gene | Date | Evidence |
---|---|---|
CG31259 | 2001-12-14 | Blastp of sequenced clone |
CG11740 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31259 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31259 | 2008-04-29 | Release 5.5 accounting |
CG31259 | 2008-08-15 | Release 5.9 accounting |
CG31259 | 2008-12-18 | 5.12 accounting |
1933 bp (1933 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071002
> RE08932.complete TGGGACCGTACTTGGCCAAATCGGCAGTCAGTTGTATTTGATGGCCGACC AGGCCATAACGTGGTTTCCTAGTAGGAGAAAATATTATTAAATAACCAAC GTGCCATAACAACTAAATAAACAACCAATGCTAGTTCCTTGCTGAAGCTT GTCGTATTTTTTAGTTGACATATATGCAGCTGAGACCAAGTGGATAACAA GCTGCAGCTGATTCGAGGAATGCCCAGCGTCATTTACTGCGAATCGAGCA ATTTGGATCATCGAATTTTTAACTGCATTCATTAGATTTTCAAGCTGAAA TTACACTGGATTAATCGTAAGTCCGGGAAATCGAGTTGAACTAGGCCATT GTGGACATTGCGTGCCACGTTCGAACTTTTGGCGATAAGCCCCTTCTCGA TAAGCTTTATCATCCCCACGAAGCCAATTCGTTAATCGTCGACGGCGGAG CATAAGTCAATATTCAAAGTGGATCATGGGCGCCCAAAGTAAACTGGCCG AGATAGCCTTGAACTGCACCTGCTATGAGTATCACCATCCGTGGACAAAG AGCTGTGCCTGCGCTGCGGCAGGAATGATGATCTCTGAGATCCCTCCCAG TCTGCGCACCTACGCCACTGTATACGTGTTTGCTCTAATCATGCGAGGAC GCATTCCATCGCTGAAGGATCTGAGACGCACTGCATCTGGAATCCTACAG TCGACAGCGTTTCTTTCGATGAATGGAGGCCTCTTTGTCTTTGCCGTGTG CTACTTGCGACAGATCTTGGGAGGATTCTACTTCGGCACAGTTGCTTGGC TGCCCTCGTTTTTGGCCAGCTTTGCATGTCTTGCCTTCGAGCGTCCGGAA CGCCGTGCTCCTCTCGCATTGTATGTGGCCAATGTGGGTATCGAAACGCT GTGGAAGATGATGGAGGCACGAGGCTGGGTTCGATCCATTCCTAATGGAC AGGTGTTCATCATGGGTGCAAGTGTGACCGCCTTGATGTATTTATATCGC GCCGGATTGCACAAGACAGTGGCCAAGGATCCGACGTTCAAGGCTATTGC CCTGATCGTGGGCAAAGAGGACGAGGGTCCACTGAAGACACCGGTGGTCA CCACCACGCAAAGCTCTCGCCAGGCTCCCCTCAACTTCCAAAGCATTTCA GCCTACGTACAGCTCTATGACCGCATGCTGAAGGCCAAACATCCAAGTTG TCCCCACAAGAGGGGCTGTGTTCCCTACGCCCTTATTGGAGGACTAAAGC CATTCCTGGGCGGTGTTGGCCTATCGGTGGGTCTAAAGCTGCTGCTCAAC ATTCCCAAGATCTTTAAGTCTAAGATGCAGTGGCGCAAGCACATCTTCAA CGGGGGATCCTTGCAGTTGGGATTGGCGCTGGGCATCTTCTCATTTCTTT TCAAGTCGACTACCTGCGGACTGCGTCACACGTTTGGTTTCGACAATGCT CTCTTCGCCATTCCGGCTGGCCTCATCGGATCGATTGGCTTCTTCCGTTT CCCGAACACCACGGTGGCCTGTTATCTAATGTGGAAGTCCATGCATCTGC TCTACAACTGGGGCATCGCGGAGGGCAAGTTGCCCGAGGTGCCGCACTTT GCGATGCTCATGTACGGATTCTTCACGGCCGTGCTCTTCCACTCGGCAAT CCTGGAGGCTCGTTCCCTGCGGCCCAGCTACTACAAGTTCCTCATGGGCA TCTCCGGAAATCGCATCAGTCGCTTTAATGTGAAGCCCTTCGAGGCTTAC GGACTGAAGAGCCAGGACCAGATCAACTATGTGATCAAGAAACTGGGCAT CGACATGACCTCACCCTTCCCCCTTTACGCCCTGACTGTCTAGATGGGTT TCCCCCATAACTTCGCATACCTACTGTACAGTAAAAAAAAAAAACAGAAA CAATAAATGTGTAACACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31259.a | 2166 | CG31259.a | 250..2166 | 3..1919 | 9585 | 100 | Plus |
CG31259-RA | 2211 | CG31259-RA | 250..2166 | 3..1919 | 9585 | 100 | Plus |
CG31454-RA | 1993 | CG31454-RA | 896..1146 | 837..1087 | 580 | 82 | Plus |
CG31454-RA | 1993 | CG31454-RA | 1381..1748 | 1322..1689 | 430 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4350717..4351494 | 628..1405 | 3890 | 100 | Plus |
chr3R | 27901430 | chr3R | 4349905..4350530 | 3..628 | 3130 | 100 | Plus |
chr3R | 27901430 | chr3R | 4351566..4352081 | 1404..1917 | 2515 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 4348278..4348985 | 698..1405 | 660 | 72.9 | Plus |
chr3R | 27901430 | chr3R | 4349056..4349447 | 1422..1813 | 295 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8524760..8525537 | 628..1405 | 3890 | 100 | Plus |
3R | 32079331 | 3R | 8523948..8524573 | 3..628 | 3130 | 100 | Plus |
3R | 32079331 | 3R | 8525609..8526124 | 1404..1919 | 2580 | 100 | Plus |
3R | 32079331 | 3R | 8522321..8523028 | 698..1405 | 660 | 72.9 | Plus |
3R | 32079331 | 3R | 8523099..8523490 | 1422..1813 | 295 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8265591..8266368 | 628..1405 | 3890 | 100 | Plus |
3R | 31820162 | 3R | 8264779..8265404 | 3..628 | 3130 | 100 | Plus |
3R | 31820162 | 3R | 8266440..8266955 | 1404..1919 | 2580 | 100 | Plus |
3R | 31820162 | 3R | 8263291..8263541 | 837..1087 | 580 | 82 | Plus |
3R | 31820162 | 3R | 8263930..8264197 | 1422..1689 | 275 | 73.5 | Plus |
3R | 31820162 | 3R | 8263776..8263859 | 1322..1405 | 195 | 82.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4349903..4350530 | 1..628 | 99 | -> | Plus |
chr3R | 4350718..4351494 | 629..1405 | 100 | -> | Plus |
chr3R | 4351568..4352081 | 1406..1917 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 1..1368 | 476..1843 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 1..1368 | 476..1843 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 1..1368 | 476..1843 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 1..1368 | 476..1843 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 1..1368 | 476..1843 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 3..1917 | 3..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 3..1917 | 3..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 3..1919 | 1..1917 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 3..1917 | 3..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31259-RA | 3..1919 | 1..1917 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8523946..8524573 | 1..628 | 99 | -> | Plus |
3R | 8524761..8525537 | 629..1405 | 100 | -> | Plus |
3R | 8525611..8526122 | 1406..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8523946..8524573 | 1..628 | 99 | -> | Plus |
3R | 8524761..8525537 | 629..1405 | 100 | -> | Plus |
3R | 8525611..8526122 | 1406..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8523946..8524573 | 1..628 | 99 | -> | Plus |
3R | 8524761..8525537 | 629..1405 | 100 | -> | Plus |
3R | 8525611..8526122 | 1406..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4349668..4350295 | 1..628 | 99 | -> | Plus |
arm_3R | 4350483..4351259 | 629..1405 | 100 | -> | Plus |
arm_3R | 4351333..4351844 | 1406..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8264777..8265404 | 1..628 | 99 | -> | Plus |
3R | 8265592..8266368 | 629..1405 | 100 | -> | Plus |
3R | 8266442..8266953 | 1406..1917 | 100 | Plus |
Translation from 475 to 1842
> RE08932.pep MGAQSKLAEIALNCTCYEYHHPWTKSCACAAAGMMISEIPPSLRTYATVY VFALIMRGRIPSLKDLRRTASGILQSTAFLSMNGGLFVFAVCYLRQILGG FYFGTVAWLPSFLASFACLAFERPERRAPLALYVANVGIETLWKMMEARG WVRSIPNGQVFIMGASVTALMYLYRAGLHKTVAKDPTFKAIALIVGKEDE GPLKTPVVTTTQSSRQAPLNFQSISAYVQLYDRMLKAKHPSCPHKRGCVP YALIGGLKPFLGGVGLSVGLKLLLNIPKIFKSKMQWRKHIFNGGSLQLGL ALGIFSFLFKSTTCGLRHTFGFDNALFAIPAGLIGSIGFFRFPNTTVACY LMWKSMHLLYNWGIAEGKLPEVPHFAMLMYGFFTAVLFHSAILEARSLRP SYYKFLMGISGNRISRFNVKPFEAYGLKSQDQINYVIKKLGIDMTSPFPL YALTV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17245-PA | 455 | GF17245-PA | 1..453 | 1..453 | 1887 | 76.2 | Plus |
Dana\GF17244-PA | 455 | GF17244-PA | 1..452 | 1..452 | 1170 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10970-PA | 455 | GG10970-PA | 1..455 | 1..455 | 2271 | 92.7 | Plus |
Dere\GG10925-PA | 455 | GG10925-PA | 1..455 | 1..455 | 1695 | 67.7 | Plus |
Dere\GG10884-PA | 454 | GG10884-PA | 1..442 | 1..442 | 1182 | 49.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17372-PA | 454 | GH17372-PA | 1..454 | 1..455 | 1568 | 60.9 | Plus |
Dgri\GH17371-PA | 455 | GH17371-PA | 1..442 | 1..442 | 1187 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31259-PB | 455 | CG31259-PB | 1..455 | 1..455 | 2389 | 100 | Plus |
CG31259-PA | 455 | CG31259-PA | 1..455 | 1..455 | 2389 | 100 | Plus |
CG31454-PA | 455 | CG31454-PA | 1..455 | 1..455 | 1648 | 67.3 | Plus |
CG11737-PC | 455 | CG11737-PC | 1..452 | 1..452 | 1187 | 50.5 | Plus |
CG11737-PB | 455 | CG11737-PB | 1..452 | 1..452 | 1187 | 50.5 | Plus |
CG11737-PA | 455 | CG11737-PA | 1..452 | 1..452 | 1187 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23915-PA | 455 | GI23915-PA | 1..455 | 1..455 | 1403 | 59.1 | Plus |
Dmoj\GI23914-PA | 455 | GI23914-PA | 1..452 | 1..452 | 1200 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22288-PA | 541 | GL22288-PA | 304..524 | 45..265 | 858 | 71.9 | Plus |
Dper\GL22288-PA | 541 | GL22288-PA | 1..310 | 1..310 | 768 | 48.9 | Plus |
Dper\GL21411-PA | 176 | GL21411-PA | 3..175 | 219..391 | 461 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16130-PA | 455 | GA16130-PA | 1..455 | 1..455 | 1809 | 76.9 | Plus |
Dpse\GA11168-PA | 455 | GA11168-PA | 1..452 | 1..452 | 1173 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23738-PA | 455 | GM23738-PA | 1..455 | 1..455 | 2330 | 95.6 | Plus |
Dsec\GM23735-PA | 455 | GM23735-PA | 1..454 | 1..454 | 1204 | 49.2 | Plus |
Dsec\GM23736-PA | 228 | GM23736-PA | 1..227 | 1..227 | 811 | 66.1 | Plus |
Dsec\GM23737-PA | 172 | GM23737-PA | 1..172 | 284..455 | 665 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18547-PA | 455 | GD18547-PA | 1..455 | 1..455 | 2369 | 97.4 | Plus |
Dsim\GD18546-PA | 455 | GD18546-PA | 1..455 | 1..455 | 1671 | 66.4 | Plus |
Dsim\GD18545-PA | 455 | GD18545-PA | 1..452 | 1..452 | 1208 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24008-PA | 452 | GJ24008-PA | 1..452 | 1..455 | 1553 | 64 | Plus |
Dvir\GJ24007-PA | 455 | GJ24007-PA | 1..452 | 1..452 | 1192 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11589-PA | 455 | GK11589-PA | 1..455 | 1..455 | 1673 | 66.6 | Plus |
Dwil\GK11588-PA | 452 | GK11588-PA | 1..449 | 1..452 | 1158 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25882-PA | 455 | GE25882-PA | 1..455 | 1..455 | 2311 | 94.3 | Plus |
Dyak\GE25881-PA | 455 | GE25881-PA | 1..455 | 1..455 | 1729 | 69 | Plus |
Dyak\GE25880-PA | 454 | GE25880-PA | 1..451 | 1..452 | 1199 | 49.7 | Plus |
Translation from 475 to 1842
> RE08932.hyp MGAQSKLAEIALNCTCYEYHHPWTKSCACAAAGMMISEIPPSLRTYATVY VFALIMRGRIPSLKDLRRTASGILQSTAFLSMNGGLFVFAVCYLRQILGG FYFGTVAWLPSFLASFACLAFERPERRAPLALYVANVGIETLWKMMEARG WVRSIPNGQVFIMGASVTALMYLYRAGLHKTVAKDPTFKAIALIVGKEDE GPLKTPVVTTTQSSRQAPLNFQSISAYVQLYDRMLKAKHPSCPHKRGCVP YALIGGLKPFLGGVGLSVGLKLLLNIPKIFKSKMQWRKHIFNGGSLQLGL ALGIFSFLFKSTTCGLRHTFGFDNALFAIPAGLIGSIGFFRFPNTTVACY LMWKSMHLLYNWGIAEGKLPEVPHFAMLMYGFFTAVLFHSAILEARSLRP SYYKFLMGISGNRISRFNVKPFEAYGLKSQDQINYVIKKLGIDMTSPFPL YALTV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31259-PB | 455 | CG31259-PB | 1..455 | 1..455 | 2389 | 100 | Plus |
CG31259-PA | 455 | CG31259-PA | 1..455 | 1..455 | 2389 | 100 | Plus |
CG31454-PA | 455 | CG31454-PA | 1..455 | 1..455 | 1648 | 67.3 | Plus |
CG11737-PC | 455 | CG11737-PC | 1..452 | 1..452 | 1187 | 50.5 | Plus |
CG11737-PB | 455 | CG11737-PB | 1..452 | 1..452 | 1187 | 50.5 | Plus |