BDGP Sequence Production Resources |
Search the DGRC for RE09091
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 90 |
Well: | 91 |
Vector: | pFlc-1 |
Associated Gene/Transcript | mRpL46-RA |
Protein status: | RE09091.pep: gold |
Sequenced Size: | 923 |
Gene | Date | Evidence |
---|---|---|
CG13922 | 2001-12-14 | Blastp of sequenced clone |
CG13922 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13922 | 2003-01-01 | Sim4 clustering to Release 3 |
mRpL46 | 2008-04-29 | Release 5.5 accounting |
mRpL46 | 2008-08-15 | Release 5.9 accounting |
mRpL46 | 2008-12-18 | 5.12 accounting |
923 bp (923 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071006
> RE09091.complete TGTTCCGGCTCTGGTGCTCATGTAATCGGTGGTCAACATTCTATTTTCCG AAAAAATTAAATTAAACTGATTAAAATGCTGCGTCGCATTGTCCAAGTGG GTGCCCGGGAGTTGAGCCGAGCCCAATCGTCAACCGCCAGCGCGGAAAAG TGGGACCTGTACGCCGGAGTGCTCGTAGAGCGTCTCCCTGTGGTGTCCAA GTCCCTTAATCCGCTGGAAAAACAGTTCCAAGACTTGCTATGGCGCGTGG AGTACGAAAACAGCCTGAAGTCTGACCATGAACTCAAGCATGAACGTGAG ATCGTCCAGGCGGAGCTCATAAAGCAGGGCAAGATCCAGGTGGACTTGGA GGACGCAGGATCCAAGCAGACAGCTCAGGACCTCAAGGACGCCTACGTCG AGGAGCTAAAAAAGTTCCAGTTGGGCTCCCGCACCACGCCCGATGACCAG GCCAACAGAACCACCTCCACGGACCGCTGTCTGGATGACACGCTCTACCT TTTGGTACAGCAGAAGCTGGGCCAGCAGGAGCACCTCATTCTACCGCAGG GAAAGCGTGAGGAGGGAGAGTCCATGCGTCAGACTGCAGAAAGAGTGCTC CGCGAGAGTTGCGGCCAGGAGCTGCAGGTTCTTTTCTACGGCAACGCCCC AGTGGGCTTCCACAAATACAAGTATCCCAGAAACCAGCGGACGGAGACTG TCGGAGCCAAGGTCTTCTTCTACAGAGCATCCCTGCGGTCCGGCCAGGTG CCCGAAAATCTGACCAAGTTCGAGTGGCTTCCCAAGGAGGCGCTCAATGA AAAGCTGACCAATACAGCCTATGCCCAAAGCGTTAAAAAGTTCTTGTTGT AATCGTAATTGTTAAAATTGTTTTGATATCTAACAAATAAATAAAAATAC TTCAGAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL46-RA | 907 | mRpL46-RA | 1..907 | 1..907 | 4535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1777001..1777907 | 1..907 | 4535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1777441..1778347 | 1..907 | 4535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1777441..1778347 | 1..907 | 4535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 6458..6497 | 861..901 | 112 | 78 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1777001..1777907 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..907 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..907 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 3..909 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 1..907 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL46-RA | 3..909 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1777441..1778347 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1777441..1778347 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1777441..1778347 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1777441..1778347 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1777441..1778347 | 1..907 | 100 | Plus |
Translation from 75 to 851
> RE09091.hyp MLRRIVQVGARELSRAQSSTASAEKWDLYAGVLVERLPVVSKSLNPLEKQ FQDLLWRVEYENSLKSDHELKHEREIVQAELIKQGKIQVDLEDAGSKQTA QDLKDAYVEELKKFQLGSRTTPDDQANRTTSTDRCLDDTLYLLVQQKLGQ QEHLILPQGKREEGESMRQTAERVLRESCGQELQVLFYGNAPVGFHKYKY PRNQRTETVGAKVFFYRASLRSGQVPENLTKFEWLPKEALNEKLTNTAYA QSVKKFLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL46-PA | 258 | CG13922-PA | 1..258 | 1..258 | 1314 | 100 | Plus |
Translation from 75 to 851
> RE09091.pep MLRRIVQVGARELSRAQSSTASAEKWDLYAGVLVERLPVVSKSLNPLEKQ FQDLLWRVEYENSLKSDHELKHEREIVQAELIKQGKIQVDLEDAGSKQTA QDLKDAYVEELKKFQLGSRTTPDDQANRTTSTDRCLDDTLYLLVQQKLGQ QEHLILPQGKREEGESMRQTAERVLRESCGQELQVLFYGNAPVGFHKYKY PRNQRTETVGAKVFFYRASLRSGQVPENLTKFEWLPKEALNEKLTNTAYA QSVKKFLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24835-PA | 258 | GF24835-PA | 1..258 | 1..258 | 1189 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14823-PA | 258 | GG14823-PA | 1..258 | 1..258 | 1283 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15718-PA | 263 | GH15718-PA | 1..263 | 1..258 | 990 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL46-PA | 258 | CG13922-PA | 1..258 | 1..258 | 1314 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12544-PA | 262 | GI12544-PA | 1..262 | 1..258 | 1017 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16054-PA | 261 | GL16054-PA | 1..261 | 1..258 | 1131 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12628-PA | 261 | GA12628-PA | 1..261 | 1..258 | 1132 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14444-PA | 258 | GM14444-PA | 1..258 | 1..258 | 1314 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13646-PA | 228 | GD13646-PA | 6..228 | 21..258 | 1093 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16062-PA | 94 | GJ16062-PA | 1..94 | 167..258 | 345 | 69.5 | Plus |
Dvir\GJ16061-PA | 82 | GJ16061-PA | 1..80 | 1..78 | 290 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16633-PA | 261 | GK16633-PA | 1..261 | 1..258 | 1072 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21186-PA | 258 | GE21186-PA | 1..258 | 1..258 | 1291 | 93.8 | Plus |