BDGP Sequence Production Resources |
Search the DGRC for RE09151
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 91 |
Well: | 51 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12106-RA |
Protein status: | RE09151.pep: gold |
Sequenced Size: | 1344 |
Gene | Date | Evidence |
---|---|---|
CG12106 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12106 | 2008-04-29 | Release 5.5 accounting |
CG12106 | 2008-08-15 | Release 5.9 accounting |
CG12106 | 2008-12-18 | 5.12 accounting |
1344 bp (1344 high quality bases) assembled on 2004-12-02
GenBank Submission: BT021322
> RE09151.complete TGGCTGTTAGGCGCATATCTTGTTTACAAGCGGTTTAATTTTATAAATAT AGCTTTGTTTTAATAAATATCCAAGAAATTTAAACTATTACACATGGACA CATTGCCGGGAAGTTCCTCCGCCCTGAGCACAGACGACGAGCAAACTGCC CTGATTTCCCCCACTGTGGTGGCCGGCTTAAAGAACCTGGGTGCCATCAT TTCGCTGCCACTCACCAAACTGCTCATTGCCAATTCCTTGAAACTGACGC TCCATCCAGATGCCACCATTGCTCCGGTGCCCGAGCTGTATGCCAAGAAC GCCGCCTGCGCCAAACAGAGCGAGTACGCGGTGGTCACCCTCTTCGCCCT GGGCACCAAGCACGGCTGGGATGGCCTTCAATTGCGCCAGCAGCTGGAGC AACTCAACCTCGATGCAGCTGCCGTCGACGAGCTGAGTCGCGTTTACGAG GACAGCCGCAAGGATCTAATTCTCCGCCAACTGCAAATAGGCCATAGCTT TCCGCACATTACCGACATCCAGTGGCGCATCGTGTGCGACGTGAAGTCTT CCACCTCGGACTGCAGCACGGGCGCGGCCTGCTTCCACATCAATCTGGGC AACTTTCGGCAGAGCAGCGGCGAGCGGGTGACCATCGTTGAGTTTGTCTG CAATGCCGAGGAGCTGCAGTCGCTAATCAATCGTCTCAAGGAGATCGAGC GGCACTGCCAACAGATGGCCGTGGTCTAGGGAAACAAGCTCTTCAAATTC TTATCGATTATATTTCGCAGCATATAACACCAGCATTGTCGGCTATATAC AGTGTCGGAACAGGAAACCTAAACAGTTAACACAGTCATCATCGCTTAAA AGGCTACGGCTTCATCATTTGGAGTCCAACTCCAATGGCAACCACTTCGT TGATCATCCGCGTCAATGGGCAACCTTGTGCGGCGGCGGCACAAGCAGCT TCATCAGCTGCCCATAGTGATTCGGCGCTGTGCTATAGATGGTGCCCGAG AAGCGGGTGCTGTCGTTCTTCTCGGCGGAAATCACTGTGCAACGGTTCTG TTCCGAAAGCCGCATGTTTAGACCACGGAAGCGTGAGTCCAGCCTGTATA GATTAGCCCCTTCCCGTGGTAGAAAGAATGGACGTCCGCTAAACGGATTC ATGAAGTCCGCCCAGTAGCCGTACGATAGCAGGCGATCGCACATCTCCCG CGCTGCCAGGACAAACTGCAAAGGTAGTTGGCATTAGTTATGTATGTAGA TATACTCGTTTAGATAATAGGTAAATACCAACAAACTAACTTCTCTGTAT TCTCATTCATCAACCCAAATCTAAAACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12106-RA | 1356 | CG12106-RA | 11..1335 | 3..1327 | 6625 | 100 | Plus |
CG12118-RB | 1315 | CG12118-RB | 834..1315 | 1217..736 | 2410 | 100 | Minus |
CG12118-RA | 1332 | CG12118-RA | 851..1332 | 1217..736 | 2410 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9085747..9086012 | 1..265 | 99 | -> | Plus |
chrX | 9086083..9087144 | 266..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..636 | 94..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..636 | 94..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..636 | 94..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..636 | 94..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..636 | 94..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..1328 | 1..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..1328 | 1..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 45..1372 | 1..1327 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 1..1328 | 1..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12106-RA | 45..1372 | 1..1327 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9193942..9194207 | 1..265 | 99 | -> | Plus |
X | 9194272..9195333 | 266..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9193942..9194207 | 1..265 | 99 | -> | Plus |
X | 9194272..9195333 | 266..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9193942..9194207 | 1..265 | 99 | -> | Plus |
X | 9194272..9195333 | 266..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9087975..9088240 | 1..265 | 99 | -> | Plus |
arm_X | 9088305..9089366 | 266..1328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9202040..9202305 | 1..265 | 99 | -> | Plus |
X | 9202370..9203431 | 266..1328 | 99 | Plus |
Translation from 93 to 728
> RE09151.pep MDTLPGSSSALSTDDEQTALISPTVVAGLKNLGAIISLPLTKLLIANSLK LTLHPDATIAPVPELYAKNAACAKQSEYAVVTLFALGTKHGWDGLQLRQQ LEQLNLDAAAVDELSRVYEDSRKDLILRQLQIGHSFPHITDIQWRIVCDV KSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLINRLKE IERHCQQMAVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22318-PA | 211 | GF22318-PA | 16..210 | 16..210 | 858 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18297-PA | 211 | GG18297-PA | 1..210 | 1..210 | 970 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17756-PA | 212 | GH17756-PA | 9..210 | 8..209 | 789 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12106-PA | 211 | CG12106-PA | 1..211 | 1..211 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15090-PA | 212 | GI15090-PA | 8..211 | 7..210 | 812 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20205-PA | 211 | GL20205-PA | 1..210 | 1..210 | 843 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11399-PA | 211 | GA11399-PA | 1..210 | 1..210 | 838 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13729-PA | 211 | GM13729-PA | 1..211 | 1..211 | 1092 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16937-PA | 211 | GD16937-PA | 1..211 | 1..211 | 1096 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18898-PA | 213 | GJ18898-PA | 8..212 | 5..210 | 790 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25799-PA | 204 | GK25799-PA | 8..203 | 13..210 | 823 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15831-PA | 211 | GE15831-PA | 1..211 | 1..211 | 1041 | 92.9 | Plus |
Translation from 93 to 728
> RE09151.hyp MDTLPGSSSALSTDDEQTALISPTVVAGLKNLGAIISLPLTKLLIANSLK LTLHPDATIAPVPELYAKNAACAKQSEYAVVTLFALGTKHGWDGLQLRQQ LEQLNLDAAAVDELSRVYEDSRKDLILRQLQIGHSFPHITDIQWRIVCDV KSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLINRLKE IERHCQQMAVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12106-PA | 211 | CG12106-PA | 1..211 | 1..211 | 1070 | 100 | Plus |