BDGP Sequence Production Resources |
Search the DGRC for RE09176
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 91 |
Well: | 76 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14818-RA |
Protein status: | RE09176.pep: gold |
Sequenced Size: | 493 |
Gene | Date | Evidence |
---|---|---|
CG14818 | 2001-12-14 | Blastp of sequenced clone |
CG14818 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14818 | 2008-04-29 | Release 5.5 accounting |
CG14818 | 2008-08-15 | Release 5.9 accounting |
CG14818 | 2008-12-18 | 5.12 accounting |
493 bp (493 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071011
> RE09176.complete ATCCCGTGACAATAAATCCAACTGGAAAAAACAAACGGAAAAACTCCGGG GAAAATTCCAGGGAAAATGTCACCCAAAAACAATCATGATCCCTCGTCGT CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC CAAGTAGATCCCTCTACGAGAAGTTATTGTTTTGTTCATCCAAATCGTTT TTAGGCACAATCAGTGCTGTTTTTTTTCTATTATCATGTATTTTTGTCCT AAGTCCTAAGTAAACGTAATTGAAAGCAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1772862..1773193 | 146..477 | 100 | <- | Minus |
chrX | 1773255..1773399 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 1..291 | 67..357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 1..291 | 67..357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 1..291 | 67..357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 1..291 | 67..357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 1..291 | 67..357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 27..503 | 1..477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 27..503 | 1..477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 25..501 | 1..477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 27..503 | 1..477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14818-RA | 25..501 | 1..477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1879019..1879350 | 146..477 | 100 | <- | Minus |
X | 1879412..1879556 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1879019..1879350 | 146..477 | 100 | <- | Minus |
X | 1879412..1879556 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1879019..1879350 | 146..477 | 100 | <- | Minus |
X | 1879412..1879556 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1773052..1773383 | 146..477 | 100 | <- | Minus |
arm_X | 1773445..1773589 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1887117..1887448 | 146..477 | 100 | <- | Minus |
X | 1887510..1887654 | 1..145 | 100 | Minus |
Translation from 66 to 356
> RE09176.pep MSPKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDALSCALDAVEQRTD DIMSQLRELLNSNREIRRLIAEENDNAPESGDDNMDGQAGSEAAPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19476-PA | 99 | GF19476-PA | 1..93 | 1..87 | 364 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12673-PA | 96 | GG12673-PA | 1..96 | 1..96 | 447 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24529-PA | 99 | GH24529-PA | 1..96 | 1..88 | 328 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14818-PB | 96 | CG14818-PB | 1..96 | 1..96 | 489 | 100 | Plus |
CG14818-PA | 96 | CG14818-PA | 1..96 | 1..96 | 489 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21609-PA | 102 | GI21609-PA | 1..97 | 1..95 | 341 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18349-PA | 98 | GL18349-PA | 1..90 | 1..88 | 336 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13271-PA | 98 | GA13271-PA | 1..90 | 1..88 | 332 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18945-PA | 95 | GM18945-PA | 1..95 | 1..96 | 450 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16409-PA | 96 | GD16409-PA | 1..96 | 1..96 | 476 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16547-PA | 105 | GJ16547-PA | 1..100 | 1..95 | 334 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16166-PA | 103 | GK16166-PA | 1..93 | 1..87 | 358 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17000-PA | 96 | GE17000-PA | 1..96 | 1..96 | 409 | 94.8 | Plus |
Translation from 66 to 356
> RE09176.hyp MSPKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDALSCALDAVEQRTD DIMSQLRELLNSNREIRRLIAEENDNAPESGDDNMDGQAGSEAAPK*