BDGP Sequence Production Resources |
Search the DGRC for RE09177
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 91 |
Well: | 77 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13806-RA |
Protein status: | RE09177.pep: gold |
Preliminary Size: | 900 |
Sequenced Size: | 1192 |
Gene | Date | Evidence |
---|---|---|
CG13806 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13806 | 2002-02-26 | Blastp of sequenced clone |
CG13806 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13806 | 2008-04-29 | Release 5.5 accounting |
CG13806 | 2008-08-15 | Release 5.9 accounting |
CG13806 | 2008-12-18 | 5.12 accounting |
1192 bp (1192 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089572
> RE09177.complete ACTTTTATTGCTGTCACCATATGAGTCTGAATCAGACAATCGAAGATTCT CGTGGAAGTTGGACCTAAACTAACCAGAAACAAAGTCCAAAAGGGGAAAT ACATCGTCATGTTCTTGGAAAGAATACTAGTGAGCGTGTTACTGCTCAAC CTGGTGGCTCTGCTTATGGGAGCCACTGTTACCACCCGGCGCATCCAGCC GCGGGAGACAAACTCCTGCGAGGGCCGTCAGAGTCCCGGGCCCATCTGCG AGTCCTGCGAGCTGCTGGCCACCTGCGTGCGTCACTCCAACGGATGGGTG AACATTCCCGTGGAATCGTGCGACGTGGCTAATGGATACTACTGCAACGC CCGGCTGGGGAGCTGCACCAACGAGACGGGCCCGTGTCATCCGTTCGGCA TCGAGGGCAACTTTCAGTGCACCTCGCAAGGCATCTTTCCAGATCCGTAC GACTGCCAGAAGTACCACATGTGCTACTTCGTGGGGGCCACTCTGGTGGC TGCTGCCGTTGATTGCGGCAACGACAAGGCCTTCGATGCGACGACTGGCC AGTGCACTTTGACCCTGACTGACTCCGTCTGCCTGCAGCGACAGTACTAC TGCCCCAATGCCGGACACGTGGCCGCCTGGCCCACCAATCCCAATATCTT CTACGTGTGCAAGTCGACGGTTAACCAGAACCTGAACGACACCATCGTCA TCTACCCCTCGCTGCACAGGTGCAACGATGGCGAGACCTTCGTGGACTAC GTCTGCCGCAGCGGATCGAATGTCCTGCCGCCCAGCACCGATGATCCTTC GGTGATCATCGAGGATCCCAACGACGACGACTTTTCGGTGCTGCCCAACA CCTGTCAGCACGTGGGCTTGATGGCCGATGGAAACGACTGCCGGAAGTAC TACTACTGCTCGGCTCTAAATGGCACCCTGCGGCACATGGACTGCCCCAA TGGGACTTACTACCGACCGGAGCTATCCTCCTGCGTCCTGGGAAGCTGCT GAGGAAGATGCATTCCTGCACTTTATTTATTCCTCTTCAATGGATTACAT TTAATAAACAACTCATGTTTACCCTGGAATAACAATCTATTTGACATGAA TTTATGAATTCCCATTTCAAAAGGTATCAGTTTGATAATAAAGATTCAAC CACCATGTCCGTGGGTAATTAAACCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13806-RA | 1451 | CG13806-RA | 243..1418 | 1..1176 | 5880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2265798..2265934 | 1..138 | 99 | -> | Plus |
chr3L | 2266007..2267043 | 139..1175 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..894 | 109..1002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..894 | 109..1002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..894 | 109..1002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..894 | 109..1002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..894 | 109..1002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..1175 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..1175 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..1175 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..1175 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13806-RA | 1..1175 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2266394..2266531 | 1..138 | 100 | -> | Plus |
3L | 2266604..2267640 | 139..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2266394..2266531 | 1..138 | 100 | -> | Plus |
3L | 2266604..2267640 | 139..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2266394..2266531 | 1..138 | 100 | -> | Plus |
3L | 2266604..2267640 | 139..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2266394..2266531 | 1..138 | 100 | -> | Plus |
arm_3L | 2266604..2267640 | 139..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2266604..2267640 | 139..1175 | 100 | Plus | |
3L | 2266394..2266531 | 1..138 | 100 | -> | Plus |
Translation from 108 to 1001
> RE09177.pep MFLERILVSVLLLNLVALLMGATVTTRRIQPRETNSCEGRQSPGPICESC ELLATCVRHSNGWVNIPVESCDVANGYYCNARLGSCTNETGPCHPFGIEG NFQCTSQGIFPDPYDCQKYHMCYFVGATLVAAAVDCGNDKAFDATTGQCT LTLTDSVCLQRQYYCPNAGHVAAWPTNPNIFYVCKSTVNQNLNDTIVIYP SLHRCNDGETFVDYVCRSGSNVLPPSTDDPSVIIEDPNDDDFSVLPNTCQ HVGLMADGNDCRKYYYCSALNGTLRHMDCPNGTYYRPELSSCVLGSC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24908-PA | 299 | GF24908-PA | 1..299 | 1..297 | 1391 | 86 | Plus |
Dana\GF24910-PA | 342 | GF24910-PA | 7..269 | 7..292 | 271 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14852-PA | 297 | GG14852-PA | 1..297 | 1..297 | 1547 | 96.3 | Plus |
Dere\GG14854-PA | 313 | GG14854-PA | 2..257 | 5..293 | 266 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16470-PA | 296 | GH16470-PA | 1..296 | 1..297 | 1176 | 73.7 | Plus |
Dgri\GH16471-PA | 280 | GH16471-PA | 1..224 | 10..227 | 249 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13806-PA | 297 | CG13806-PA | 1..297 | 1..297 | 1659 | 100 | Plus |
CG32302-PA | 313 | CG32302-PA | 24..258 | 35..293 | 301 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12142-PA | 300 | GI12142-PA | 1..300 | 1..297 | 1214 | 74.8 | Plus |
Dmoj\GI12143-PA | 266 | GI12143-PA | 31..255 | 34..285 | 251 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24644-PA | 297 | GL24644-PA | 1..297 | 1..297 | 1290 | 82.9 | Plus |
Dper\GL24645-PA | 344 | GL24645-PA | 20..273 | 22..296 | 282 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12542-PA | 297 | GA12542-PA | 1..297 | 1..297 | 1290 | 82.9 | Plus |
Dpse\GA16817-PA | 344 | GA16817-PA | 16..344 | 18..297 | 269 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14477-PA | 297 | GM14477-PA | 1..297 | 1..297 | 1580 | 99.7 | Plus |
Dsec\GM14480-PA | 312 | GM14480-PA | 10..257 | 18..293 | 267 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13674-PA | 297 | GD13674-PA | 1..297 | 1..297 | 1570 | 99 | Plus |
Dsim\GD13676-PA | 312 | GD13676-PA | 10..257 | 18..293 | 266 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13421-PA | 295 | GJ13421-PA | 1..295 | 1..297 | 1200 | 75.8 | Plus |
Dvir\GJ13422-PA | 370 | GJ13422-PA | 36..273 | 34..296 | 256 | 28.3 | Plus |
Translation from 108 to 1001
> RE09177.hyp MFLERILVSVLLLNLVALLMGATVTTRRIQPRETNSCEGRQSPGPICESC ELLATCVRHSNGWVNIPVESCDVANGYYCNARLGSCTNETGPCHPFGIEG NFQCTSQGIFPDPYDCQKYHMCYFVGATLVAAAVDCGNDKAFDATTGQCT LTLTDSVCLQRQYYCPNAGHVAAWPTNPNIFYVCKSTVNQNLNDTIVIYP SLHRCNDGETFVDYVCRSGSNVLPPSTDDPSVIIEDPNDDDFSVLPNTCQ HVGLMADGNDCRKYYYCSALNGTLRHMDCPNGTYYRPELSSCVLGSC*