BDGP Sequence Production Resources |
Search the DGRC for RE09466
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 94 |
Well: | 66 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1265-RB |
Protein status: | RE09466.pep: gold |
Preliminary Size: | 567 |
Sequenced Size: | 838 |
Gene | Date | Evidence |
---|---|---|
CG1265 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1265 | 2002-04-22 | Blastp of sequenced clone |
CG1265 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1265 | 2008-04-29 | Release 5.5 accounting |
CG1265 | 2008-08-15 | Release 5.9 accounting |
CG1265 | 2008-12-18 | 5.12 accounting |
838 bp (838 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113399
> RE09466.complete AGACGCTGCAAATTTCGAATTTCGACGGTCGCTATGAGTGGAGCTCTCGG AGATGTGGTGTCCGAATACCTGGAGCGCGGCCCAGTGCTCGTGGTGGCGG ACCTCCTTAGCCTGATAACGGTCTCGTCCTGCCTGGTGATCAAGGTTCCG CAGATAAACACGATACGGGCGAACGAGTCCTCGAAAGGCATCAGTGTTTT GGGACTGTGCCTGGAGCTGTTCAGTTATACGGTGATGTTGTCGTACAACT ACACCAGTGGCTACGACTTCCTCTCGTACATGGAGTATCCTGTTTTGCTG CTGCAGGAGTACGCCCTGATTTACTACGCCTTCAAGTACCAGGATCTGCT GGGAAGGAGGACGCAAGTGGTGGCCATACTGTATAGTATAGTGGCCACTC TCATATACATGAAGCTCTTTCCCATTATCATCCTTAAGTTCCTGGTGCCT TTCTGCACTCCCATTGGAGCCACGAGTAAGGTCCTCCAGCTGCTGGCTAT TCTGAGGACCAAGGATGCCAGTTCCGTCAGTAGAACCACATGGGCGCTCT CCGCCTTTACAAACATGACTCGAATCTACACGGTGTTCTTCCAGTCCCAC GATTGGATGTTGCTATCAAACTTCCTGATTTCGACGTTCCTTAGCGCCTC CGTTTTCACCGCCGCTTGCGTCTACAAGAAGAAGGCCAAGGCGGAGTAAT TGGCCAGCCTGATTAGAAAAGCTCAACATAGACAAACACTGCGCTGGCTG GAAATGCTTATCAGTCATTGTTTTAATTCTATTTGCTTATCTGTTTAAAT TGATATTACAAATTCTTGTTCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1265-RB | 1141 | CG1265-RB | 124..947 | 1..824 | 4090 | 99.7 | Plus |
CG1265.a | 999 | CG1265.a | 24..470 | 1..447 | 2220 | 99.7 | Plus |
CG1265.a | 999 | CG1265.a | 622..999 | 447..824 | 1875 | 99.7 | Plus |
CG15011-RA | 2764 | CG15011-RA | 2660..2764 | 824..720 | 510 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4254420..4254681 | 186..447 | 1310 | 100 | Plus |
chr3L | 24539361 | chr3L | 4255186..4255437 | 569..820 | 1260 | 100 | Plus |
chr3L | 24539361 | chr3L | 4254168..4254355 | 1..188 | 925 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 4254995..4255116 | 447..568 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4255034..4255295 | 186..447 | 1310 | 100 | Plus |
3L | 28110227 | 3L | 4255800..4256055 | 569..824 | 1265 | 99.6 | Plus |
3L | 28110227 | 3L | 4254782..4254969 | 1..188 | 925 | 99.5 | Plus |
3L | 28110227 | 3L | 4255609..4255730 | 447..568 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4255034..4255295 | 186..447 | 1310 | 100 | Plus |
3L | 28103327 | 3L | 4255800..4256055 | 569..824 | 1265 | 99.6 | Plus |
3L | 28103327 | 3L | 4254782..4254969 | 1..188 | 925 | 99.4 | Plus |
3L | 28103327 | 3L | 4255609..4255730 | 447..568 | 610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4254996..4255116 | 448..568 | 100 | -> | Plus |
chr3L | 4254168..4254354 | 1..187 | 99 | -> | Plus |
chr3L | 4254422..4254681 | 188..447 | 100 | -> | Plus |
chr3L | 4255186..4255439 | 569..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 1..666 | 34..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 1..666 | 34..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 1..666 | 34..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 1..666 | 34..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 1..666 | 34..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 9..830 | 1..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 9..830 | 1..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 7..828 | 1..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 9..830 | 1..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1265-RB | 7..828 | 1..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4254782..4254968 | 1..187 | 99 | -> | Plus |
3L | 4255036..4255295 | 188..447 | 100 | -> | Plus |
3L | 4255610..4255730 | 448..568 | 100 | -> | Plus |
3L | 4255800..4256053 | 569..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4254782..4254968 | 1..187 | 99 | -> | Plus |
3L | 4255036..4255295 | 188..447 | 100 | -> | Plus |
3L | 4255610..4255730 | 448..568 | 100 | -> | Plus |
3L | 4255800..4256053 | 569..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4254782..4254968 | 1..187 | 99 | -> | Plus |
3L | 4255036..4255295 | 188..447 | 100 | -> | Plus |
3L | 4255610..4255730 | 448..568 | 100 | -> | Plus |
3L | 4255800..4256053 | 569..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4254782..4254968 | 1..187 | 99 | -> | Plus |
arm_3L | 4255036..4255295 | 188..447 | 100 | -> | Plus |
arm_3L | 4255610..4255730 | 448..568 | 100 | -> | Plus |
arm_3L | 4255800..4256053 | 569..822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4255036..4255295 | 188..447 | 100 | -> | Plus |
3L | 4255610..4255730 | 448..568 | 100 | -> | Plus |
3L | 4255800..4256053 | 569..822 | 99 | Plus | |
3L | 4254782..4254968 | 1..187 | 99 | -> | Plus |
Translation from 0 to 698
> RE09466.hyp RSCKFRISTVAMSGALGDVVSEYLERGPVLVVADLLSLITVSSCLVIKVP QINTIRANESSKGISVLGLCLELFSYTVMLSYNYTSGYDFLSYMEYPVLL LQEYALIYYAFKYQDLLGRRTQVVAILYSIVATLIYMKLFPIIILKFLVP FCTPIGATSKVLQLLAILRTKDASSVSRTTWALSAFTNMTRIYTVFFQSH DWMLLSNFLISTFLSASVFTAACVYKKKAKAE*
Translation from 33 to 698
> RE09466.pep MSGALGDVVSEYLERGPVLVVADLLSLITVSSCLVIKVPQINTIRANESS KGISVLGLCLELFSYTVMLSYNYTSGYDFLSYMEYPVLLLQEYALIYYAF KYQDLLGRRTQVVAILYSIVATLIYMKLFPIIILKFLVPFCTPIGATSKV LQLLAILRTKDASSVSRTTWALSAFTNMTRIYTVFFQSHDWMLLSNFLIS TFLSASVFTAACVYKKKAKAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25055-PA | 220 | GF25055-PA | 2..220 | 4..221 | 1036 | 90.4 | Plus |
Dana\GF15707-PA | 253 | GF15707-PA | 41..232 | 25..217 | 154 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15210-PA | 221 | GG15210-PA | 1..221 | 1..221 | 1125 | 98.2 | Plus |
Dere\GG25037-PA | 252 | GG25037-PA | 41..236 | 25..220 | 150 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15935-PA | 223 | GH15935-PA | 4..223 | 2..221 | 992 | 85 | Plus |
Dgri\GH13077-PA | 253 | GH13077-PA | 41..235 | 25..220 | 162 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1265-PB | 221 | CG1265-PB | 1..221 | 1..221 | 1100 | 100 | Plus |
CG3792-PA | 252 | CG3792-PA | 41..232 | 25..217 | 175 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16587-PA | 226 | GI16587-PA | 7..224 | 2..219 | 986 | 86.2 | Plus |
Dmoj\GI21484-PA | 254 | GI21484-PA | 41..232 | 25..217 | 163 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12841-PA | 221 | GL12841-PA | 1..219 | 1..219 | 1011 | 87.7 | Plus |
Dper\GL26539-PA | 252 | GL26539-PA | 41..232 | 25..217 | 158 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11737-PA | 221 | GA11737-PA | 1..219 | 1..219 | 1013 | 88.1 | Plus |
Dpse\GA17688-PA | 252 | GA17688-PA | 41..232 | 25..217 | 154 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14639-PA | 221 | GM14639-PA | 1..221 | 1..221 | 1122 | 98.2 | Plus |
Dsec\GM18511-PA | 252 | GM18511-PA | 41..232 | 25..217 | 150 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13827-PA | 221 | GD13827-PA | 1..221 | 1..221 | 1123 | 97.7 | Plus |
Dsim\GD23315-PA | 252 | GD23315-PA | 41..232 | 25..217 | 150 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12839-PA | 226 | GJ12839-PA | 7..224 | 2..219 | 971 | 82.6 | Plus |
Dvir\GJ17483-PA | 254 | GJ17483-PA | 41..232 | 25..217 | 157 | 26.4 | Plus |