BDGP Sequence Production Resources |
Search the DGRC for RE09848
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 98 |
Well: | 48 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13014-RA |
Protein status: | RE09848.pep: gold |
Preliminary Size: | 699 |
Sequenced Size: | 1035 |
Gene | Date | Evidence |
---|---|---|
CG13014 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13014 | 2002-06-04 | Blastp of sequenced clone |
CG13014 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13014 | 2008-04-29 | Release 5.5 accounting |
CG13014 | 2008-08-15 | Release 5.9 accounting |
CG13014 | 2008-12-18 | 5.12 accounting |
1035 bp (1035 high quality bases) assembled on 2002-06-04
GenBank Submission: AY118622
> RE09848.complete AATATTGACGTAAATCTTGTTATTGTTTTGATGCAACAAATATTTAATAA AGTTTAACTAAAGATCATTTATCCGCCGTTACATCGGCAACAAACTTGGT CGAGGAATCAAGTCGCCCGTCCGCAAACTGGACGGAAGATTTGCCACCTT GAGGTGGAATCACCGGCAACCGGCGTGATCGCTCTCAAGTCAAAACAATG GTGTCCAACAGAAGTCCTCCTCCGAATCATGGTCCCTTGCCGGGGTCCAG TGGTGGCACCTCCCTGCTAGCCCTGTGCCTGATCCACTTCGTCCTGGCCG TGATCTCCGGCTGGGGTCTGAAACGGAGCACCGGCAGCAAGGCGATGGCC GCCTTTGGGATCTACTTTGGCCACAGCCTGCTCTGCCTGCTGCGGCACAC GCATCCCAATCCGGGCGCAGTGCAGCGTCTGCTGTGCGACAAGTCGAGAC GTTACTCCTGCGTCCTATTTGTCACCCTGGTGGTGGGCGAGCTGCAGACC GTAAATCCGGCCACCCGAATGGGTGACTTCTTCGGCGCCGACTGGGAGCG TCTGGCCTTTGGACTGTGGAGCGCTGTACTGGCACTTGCAGTCACCAGCT TGTGGTTCGGCAACAGTCGCAGTCCACTGGGTGCCACATTCATAAAACTG GATGCCGCGCAATTGGGCCTCTGTGTTCTGTGGAATGTCCACTGTCTTTG GCGCATCGCCATCGTCGACGAGCACTGGTGGTCACTTGGCCTGGCCCTGC TTGTTCTGCTGAATCACTTTGTCCTGTGGCGACTGCCGCTGCACTACAAC ATCAGCCAATTGGAGGTGGCCACCGTGGGCATGTGCTTTAGCACCATCTT TGCGCTGAATGCCATCCAGGAGCAACTGGACGCTGTGGCCAGCTGAGAGT AGCTGGTCGGGCAACCAGGGACTGGAGCCTTGATTGCCAAGCTCTAAGAC ACCAACATTTAATTATAAGATGCACGTTGTTGAACAATTTTTTGAGTAAT AAACCAGACTTCTTATTTCGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13014-RA | 1026 | CG13014-RA | 1..1023 | 1..1023 | 5115 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16477580..16478599 | 1..1020 | 5010 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16587911..16588933 | 1..1023 | 5115 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16596009..16597031 | 1..1023 | 5115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16477580..16478599 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..699 | 198..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..699 | 198..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..699 | 198..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..699 | 198..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..699 | 198..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..1020 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..1020 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 39..1058 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 1..1020 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13014-RA | 39..1058 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16587911..16588930 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16587911..16588930 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16587911..16588930 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16481944..16482963 | 1..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16596009..16597028 | 1..1020 | 100 | Plus |
Translation from 197 to 895
> RE09848.pep MVSNRSPPPNHGPLPGSSGGTSLLALCLIHFVLAVISGWGLKRSTGSKAM AAFGIYFGHSLLCLLRHTHPNPGAVQRLLCDKSRRYSCVLFVTLVVGELQ TVNPATRMGDFFGADWERLAFGLWSAVLALAVTSLWFGNSRSPLGATFIK LDAAQLGLCVLWNVHCLWRIAIVDEHWWSLGLALLVLLNHFVLWRLPLHY NISQLEVATVGMCFSTIFALNAIQEQLDAVAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20793-PA | 233 | GF20793-PA | 1..228 | 1..232 | 881 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19055-PA | 232 | GG19055-PA | 1..232 | 1..232 | 1155 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17669-PA | 220 | GH17669-PA | 4..219 | 17..232 | 576 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13014-PA | 232 | CG13014-PA | 1..232 | 1..232 | 1233 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11132-PA | 207 | GI11132-PA | 19..205 | 30..229 | 432 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19970-PA | 232 | GL19970-PA | 35..230 | 24..228 | 724 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11976-PA | 240 | GA11976-PA | 35..239 | 24..229 | 757 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13445-PA | 232 | GM13445-PA | 1..232 | 1..232 | 1186 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17287-PA | 232 | GD17287-PA | 1..232 | 1..232 | 1186 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19057-PA | 219 | GJ19057-PA | 19..217 | 30..229 | 504 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25103-PA | 228 | GK25103-PA | 7..227 | 16..232 | 607 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17277-PA | 232 | GE17277-PA | 1..232 | 1..232 | 1114 | 96.1 | Plus |
Translation from 197 to 895
> RE09848.hyp MVSNRSPPPNHGPLPGSSGGTSLLALCLIHFVLAVISGWGLKRSTGSKAM AAFGIYFGHSLLCLLRHTHPNPGAVQRLLCDKSRRYSCVLFVTLVVGELQ TVNPATRMGDFFGADWERLAFGLWSAVLALAVTSLWFGNSRSPLGATFIK LDAAQLGLCVLWNVHCLWRIAIVDEHWWSLGLALLVLLNHFVLWRLPLHY NISQLEVATVGMCFSTIFALNAIQEQLDAVAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13014-PA | 232 | CG13014-PA | 1..232 | 1..232 | 1233 | 100 | Plus |