Clone RE10036 Report

Search the DGRC for RE10036

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:100
Well:36
Vector:pFlc-1
Associated Gene/TranscriptRgk2-RA
Protein status:RE10036.pep: gold
Sequenced Size:4919

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30119 2003-01-01 Sim4 clustering to Release 3
CG15069 2004-01-14 Blastp of sequenced clone
Rgk2 2008-04-29 Release 5.5 accounting
Rgk2 2008-08-15 Release 5.9 accounting
Rgk2 2008-12-18 5.12 accounting

Clone Sequence Records

RE10036.complete Sequence

4919 bp (4919 high quality bases) assembled on 2004-01-14

GenBank Submission: BT011477

> RE10036.complete
GTTTTAGGATTTTTAAATGATTGCTAAATAAATTTCAAATGTTATAATTA
TAAAATGTGACACTTGTAACTAGTCTTGCTCTTGTTTCATAACTAAGACT
TTTAATATTTTTCAAAATCCTAATTTATGGTGTTAATTTGCCAAGATTAT
AGAAATAAATTAAGTTAAATTTTTCCCACTTGCCTTATATAAGATGAAAC
CGCTAGATGATTTCCCAATCATCTCCTGCAACGGCTATCCACTGCATTCG
CTAGCTTTCCTCGGCTCCATTTTCCAGCCCAATGGAAGGCCGCGAAAAGC
TCAACAGTCGGAGCTTTTCCAGCACTTCGGATTCACAGGAATCGGGAGCC
AGGAAAAAGGCAGCCAAGAATCGGTGGGCACCACAGTTCAGCTCGAGCAG
CCGCCGCCGCAGCTTCGACCGGGCGGAAGTTCGTGAGAGCGGCAGTCGCC
AGCGGAAACGGAAGTGCAGAAAGCCCCGAGCGGCTGGCCGTGCAAACTGT
TGCTCGTCGGTGTGTGTTGTGCTATTTGTGGTGGTGTTTGTGCTAGTGAA
TGTGATGGTGATGGTGTACCAGTATCGGTGTGCTGATGTTTGTCGCGGTG
GCATTGTTGGTGTTGAACAATTAGCCAAGTTGCTATAACAGACCGAATTA
TCCGACAAATTTGATGAAAATGGTAAACATTAAACTGTAATGCGGCACGC
GGAGTAAAATAGTCGTGAAATGGCCCAGCAACAGCGCAGCTGGGACGAGG
GAGCTGTCGGTGGAGGATCCTATGGCCATCCCCACTCCTCGCACCACAAA
GTACCTGCTCGCGCTGCCAGCAATCCGCTGCCCTGCAAAGGAGCCACTCC
CAAGCTGCCCAGGCAATACCATGGAGGTCCGACGTCGAGCTATAACTATG
GAGGATATGATACCCCGAGGAGTCCCAAGATCACCACCACCTTTGCCCAA
GACAGTTGTGATGATGTCAGTAGCTCCACGCCCAGCTCCTATTATCAGAC
GCCCCCATCGGGATCGATAGATGATTCGGCATCTCTGCTCAGTGGACGCA
CCACTGCCCGCAGTCCCAAGTCGCAGTGCCAGTTCGTCTTTGATGCAGTG
AGTCCCAGTCACGGAAGGAAGTTCGAGTACTACGAACCGATCTCGCCAGA
CGATGGAGCTCTCTACTATGATCCACCCAGTTCGCCACGTCGGCAGGGTT
CCAAAAAGTTAATGAGAACAAAGACCCCACTGGATCCCGTTCCCCAATTG
ACTACGACAGGCGTGGATGAGAGCATGGCGGTGGCTATGGCCATGGGCGG
AGCAGGAGGTGGAGGTTACGCCCAAGGAGGACCAAACAAGCGGCAGAGAG
ATGAGTGGGAACTACCGGTGATCAGCAAGATCGAGGCGAGAAACCTAAGT
GCGGCTGCAGGATCAAGCTCGGCTGGAGGAAGTTATTATGGCTTGAAGCG
CGACTCCTGCGTCACAGACTGCACGCAGCTGTCTATGGAATCCGGCGAGA
CGGGTACCCAGCATACCAATAGCACCATGGTGACCCACACCACCACCAGC
TTTAGCTTTACGGAGCCGGAAATGGAGCAAGAGGCTGGACAGCCGCAATT
ACGGCGCCAACGTCGCCATGCCATCAACATCACCTCCAATCCCGGCTACC
AGGTGCTCCACAGCTCCCACTCCACGCTGGATCGTACCTGTTCCGATAGC
GTGGTCTCACTTCGCTACCGCAAATCCACCAGTGACCTGACCCAAGATGC
TGAACACGAGCTAAGTGGCTGCAAGCCCAACAAGCCGAAGGCCCATGTGG
AGCATAAACCGCGACGCCGGGGCAGCTCCAAAGGTGGACTGGCCTACTTG
GCCAGCCGGCGAAGTTCCCGTGAGTCGATGAAGAGCGCCTGCTCCAATGC
CTCCATCGTTTCCAACGACGATGTTGGACCACTGGCCTTCCAGAGTTCGA
ATCGCGGTCGCCAGCGTAGAACATCGAACTTTCTCGAGTTGCCAGTTCCC
GACCATGTGCGTCCGCGAGTCTGTTCCCTTCCAGAGCGACCGTACAATCC
GCGTGCCAGTGATGACCTGTACCGCCTGCGTCACTTCTCCATCAGCAAGG
GCAACGTGGTTAACTGTGGCGACTCGATAATCTCGCGGAGATCGCGAAGC
AACACCAGCGTCAACTCGACAAACAGCCGGGCCAGCGAACGTTCCCCATT
CGAGGGCAGCTGTTGCGGAGCGGGCTATGCCAATGTGGATTCGCTGCCGG
CAACACCGGATGACTCGGAGAATTTGGATCCACCTCCGCCCGCCCGCTAC
CGCGTCGTGATGCTGGGCGATGCCGGCGTGGGCAAGACGGCGCTGGTCAA
TCAGTTCATGACGTCGGAGTACATGCACACCTATGACGCCAGCCTGGACG
ACGAGTTCGGCGAGAAGACGGTGAGCGTGCTGCTGGACGATGAGGAGTCG
GACATGGTCTTCATCGACCATCCAAGCGTTGAGATGAGCGTGGAGAACTC
CCTATCCACATATGAGCCACATGGCTGCGTCGTGGTCTTCTCGGTGGTGG
ATCGCAGCTCCTTCCGCGTGGCCGAGGAAATCATAAATTACCTGTGGCAG
GAGAACTACACCAAGGACAAGGCTGTCATACTGGTGGGCAACAAGGCGGA
TCTGGCCCGCGCCCGGCTTATCACATCACAGGAGGGCAAAGCGCTGGCCG
CCTCACGCGATGCCAAATTTATTGAGACGTCTAGCGGCATACAGCACAAC
GTCGATGAGCTGCTCGTCGGCATATTGAAGCAGATGCGGCTGAAAGAGAA
GCGGGAGAAAAAGGCCACCGCCTCGAAGATGAAGACTTCCCGCACCCACA
TATCGCTGCACTTGGCCAAGGAACTGCTGCAGAAGATCTGCCTCAGCGAC
ATCTCCAAGTCGAAGAGCTGCGAGAATCTGCATGTGCTATAAAGATATCC
CCCAGGCAAAACCCAATCACATGTGCTGAGCCAACCTCGATGTCTTCGTT
TTATCGCCCGGCATTCCTGGGCCAAAATTATGCCACAAAACTGTATACAA
AAGCGAATTTTTATCAAAAGCGGCTGCGGGGCGAAATATTCCAAATGCCA
TTCAGATGGGACCGCAGAAAACGGGCGGAGGGATGTGTTCATCTCCTTTG
TTGGGCTCCGTATATTAAAAGTTTAATGCCGGGTCTTGCTTTTCAGCAAG
TCATTGGCTGTGGTCAGGCCTCCAGATTCGGCGATAGTCGGCTTGTTTAT
GGCGGATGTTTTGGATTGGCTTATCGCAGCCAGACGCTCCTCCAACTTGG
GTGCCGAAGGTCACGATTGATAAGCCCCGATCCAATGATCCATTGATCCA
ACGAGGCGTGTGTGGCCTCCAAGTGGGCGAGGCCATAGAACTATTTATTT
ATAGGTGTACTTTTTAATGCGTACTTGCATATACATACATATATGTGTTC
CAATGCGAATAACTTCAATTCCAATAATGCGCTGTCAATTGAAACGCTTG
AGGAGCAGTTCCCAAAGGACGAGAGAAACTTTATAGATGTTGATTTATGT
ATACACATAGTGGCCATAAGCAGCATATACATATACACGTGACCTCTATC
GGATAAGTATATTGTCTAGGCTAGGGTTACTAAACTAAACGCTCCACCTG
CTTCGCAAAAAAAATTCTTCCAATTGACGAATATCTCATATCGGAATGAC
TGTTGAATGTTGACTGTTGTTAATCTAAGCCAAACAAAAAACAAAACAAA
AAACATAAAAACAAAGCAAAACTAAAGAGAATACCATTTAATCAAAGTAC
TTCACTCAGACGTTACTACGAGTATATTGATGTGTATCTTTACGTGTACC
TATATTATACATTATATATATATATTTAGAGATAGATACATATACACATA
TATTTACGACCGTGCTCGGATGGAACTTCTAACACTTCTGAACTCATACG
CTTATATTTGAAAAATACCTTTTACAAAATGCGAAAGGCAAGCAAAACCA
AACGTATCTCTAACTATTTTCATACGCAAACTTACACATTAAAGGGGGAA
CGCGAGGATCCGAACGGGAGTGGGATTGAAGGCCTGGCCACCGGGCTCGT
CCAAAGTCGAGCACTCGACAGCTGTGCACTCATGTTTGCTCTACCCCTTT
CCTTTCGCTTCACATCCTTCACGTCCGCCTTTCTGTCGAGTGCACTTTAT
CATTTTTAACATTTAGCAAACAAAACAGAAAGTTGCTCCGGCGAAAGTTT
TAATTTGCAACGCTACGCAACGCAATGCAAAAAGCCTGGCTGGCTGGCGA
AAATTCAAATATTTCGCAGCCGCACTGTGGCAATCTGCATCGCGCATACG
CCGCGTGGTCCGCAGTCGGGACTAAATTGATTTGCTAATCAAATTGCTGA
GGAATCCACAATCGAATCAAAGCCAGCTATGAACTCCCACCGAATTTATT
GTGAAATGTCATTTAAAAACGATGAAATTGTACCGCTACCACTTAACCAT
GACAATTGGCTTAAAGCGTAGCTATAAAGATATCCAAGAAAAACCCTATA
TATATATATATATATAAAAATATATATGTATGTGTGTATGTGTAAAGATC
GATGTATATTTATATTTTTCCAAACAAAGACAAAGCAAAGCAGCGCTGTA
CAACTGAAGGGAACCCTCAACTGAGAATCATTTTTGTGTTGCATAGTATA
ATCCACAATTGTACGCTTTTGCCCGTCACCGAGATGAGGCTGCAGAAAAG
CAAATTAATTAGAGTACACGAAGATAAAATCCGATTACTTGTTTGGTGTA
TCAAACTTTCCTTCACCTCCAACTCCGCCTTCCTAACCATCCTGTCTCCC
CTCACCACGACTCGATCTCTTCATTCGATAAATAAAGGACAAGGACGCTC
TGTAAAAAAAAAAAAAAAA

RE10036.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
Rgk2-RA 4933 Rgk2-RA 1..4905 1..4905 24510 99.9 Plus
Rgk2.b 4901 Rgk2.b 1..4901 1..4904 24435 99.9 Plus
Rgk2.a 4909 Rgk2.a 2403..4909 2397..4903 12535 100 Plus
Rgk2.a 4909 Rgk2.a 1..2397 1..2397 11970 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:34:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14433958..14436084 2776..4903 10425 99.4 Plus
chr2R 21145070 chr2R 14431218..14432353 860..1995 5665 99.9 Plus
chr2R 21145070 chr2R 14426697..14427410 1..709 3460 99.3 Plus
chr2R 21145070 chr2R 14432421..14432825 1993..2397 2010 99.8 Plus
chr2R 21145070 chr2R 14432997..14433282 2397..2682 1430 100 Plus
chr2R 21145070 chr2R 14431012..14431165 710..863 770 100 Plus
chr2R 21145070 chr2R 14433357..14433458 2682..2783 510 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:32:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:33:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18546847..18548971 2781..4905 10625 100 Plus
2R 25286936 2R 18544117..18545252 860..1995 5665 99.9 Plus
2R 25286936 2R 18539585..18540293 1..709 3545 100 Plus
2R 25286936 2R 18545320..18545724 1993..2397 2025 100 Plus
2R 25286936 2R 18545896..18546181 2397..2682 1430 100 Plus
2R 25286936 2R 18543911..18544064 710..863 770 100 Plus
2R 25286936 2R 18546256..18546357 2682..2783 510 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18548046..18550170 2781..4905 10625 100 Plus
2R 25260384 2R 18545316..18546451 860..1995 5665 99.9 Plus
2R 25260384 2R 18540784..18541492 1..709 3545 100 Plus
2R 25260384 2R 18546519..18546923 1993..2397 2025 100 Plus
2R 25260384 2R 18547095..18547380 2397..2682 1430 100 Plus
2R 25260384 2R 18545110..18545263 710..863 770 100 Plus
2R 25260384 2R 18547455..18547556 2682..2783 510 100 Plus
2R 25260384 2R 19313796..19313835 2942..2903 170 95 Minus
2R 25260384 2R 19318751..19318834 2387..2304 165 79.7 Minus
Blast to na_te.dros performed 2019-03-16 12:33:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 3318..3419 615..513 161 69.4 Minus
invader1 4032 invader1 INVADER 4032bp 3438..3546 201..90 129 59.8 Minus

RE10036.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:35:18 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14426697..14427410 1..709 99 -> Plus
chr2R 14431012..14431164 710..862 100 -> Plus
chr2R 14431221..14432353 863..1995 99 -> Plus
chr2R 14432424..14432825 1996..2397 99 -> Plus
chr2R 14432998..14433282 2398..2682 100 -> Plus
chr2R 14433358..14433458 2683..2783 100 -> Plus
chr2R 14433966..14434907 2784..3726 99 == Plus
chr2R 14434965..14435031 3784..3850 100 == Plus
chr2R 14435085..14435727 3904..4546 99 == Plus
chr2R 14435797..14436084 4616..4903 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:52:51 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..2223 720..2942 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:48:20 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..2223 720..2942 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:33:08 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..2223 720..2942 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:30:10 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..2223 720..2942 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:47:48 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..2223 720..2942 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:58:11 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..4901 1..4901 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:48:20 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..4901 1..4901 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:33:08 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..4903 1..4903 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:30:10 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..4901 1..4901 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:47:48 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk2-RA 1..4903 1..4903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:35:18 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18539585..18540293 1..709 100 -> Plus
2R 18543911..18544063 710..862 100 -> Plus
2R 18544120..18545252 863..1995 99 -> Plus
2R 18545323..18545724 1996..2397 100 -> Plus
2R 18545897..18546181 2398..2682 100 -> Plus
2R 18546257..18546357 2683..2783 100 -> Plus
2R 18546850..18548969 2784..4903 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:35:18 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18539585..18540293 1..709 100 -> Plus
2R 18543911..18544063 710..862 100 -> Plus
2R 18544120..18545252 863..1995 99 -> Plus
2R 18545323..18545724 1996..2397 100 -> Plus
2R 18545897..18546181 2398..2682 100 -> Plus
2R 18546257..18546357 2683..2783 100 -> Plus
2R 18546850..18548969 2784..4903 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:35:18 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18539585..18540293 1..709 100 -> Plus
2R 18543911..18544063 710..862 100 -> Plus
2R 18544120..18545252 863..1995 99 -> Plus
2R 18545323..18545724 1996..2397 100 -> Plus
2R 18545897..18546181 2398..2682 100 -> Plus
2R 18546257..18546357 2683..2783 100 -> Plus
2R 18546850..18548969 2784..4903 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:33:08 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14427090..14427798 1..709 100 -> Plus
arm_2R 14431416..14431568 710..862 100 -> Plus
arm_2R 14431625..14432757 863..1995 99 -> Plus
arm_2R 14432828..14433229 1996..2397 100 -> Plus
arm_2R 14433402..14433686 2398..2682 100 -> Plus
arm_2R 14433762..14433862 2683..2783 100 -> Plus
arm_2R 14434355..14436474 2784..4903 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:07:12 Download gff for RE10036.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18547096..18547380 2398..2682 100 -> Plus
2R 18547456..18547556 2683..2783 100 -> Plus
2R 18545110..18545262 710..862 100 -> Plus
2R 18540784..18541492 1..709 100 -> Plus
2R 18545319..18546451 863..1995 99 -> Plus
2R 18546522..18546923 1996..2397 100 -> Plus
2R 18548049..18550168 2784..4903 100   Plus

RE10036.pep Sequence

Translation from 719 to 2941

> RE10036.pep
MAQQQRSWDEGAVGGGSYGHPHSSHHKVPARAASNPLPCKGATPKLPRQY
HGGPTSSYNYGGYDTPRSPKITTTFAQDSCDDVSSSTPSSYYQTPPSGSI
DDSASLLSGRTTARSPKSQCQFVFDAVSPSHGRKFEYYEPISPDDGALYY
DPPSSPRRQGSKKLMRTKTPLDPVPQLTTTGVDESMAVAMAMGGAGGGGY
AQGGPNKRQRDEWELPVISKIEARNLSAAAGSSSAGGSYYGLKRDSCVTD
CTQLSMESGETGTQHTNSTMVTHTTTSFSFTEPEMEQEAGQPQLRRQRRH
AINITSNPGYQVLHSSHSTLDRTCSDSVVSLRYRKSTSDLTQDAEHELSG
CKPNKPKAHVEHKPRRRGSSKGGLAYLASRRSSRESMKSACSNASIVSND
DVGPLAFQSSNRGRQRRTSNFLELPVPDHVRPRVCSLPERPYNPRASDDL
YRLRHFSISKGNVVNCGDSIISRRSRSNTSVNSTNSRASERSPFEGSCCG
AGYANVDSLPATPDDSENLDPPPPARYRVVMLGDAGVGKTALVNQFMTSE
YMHTYDASLDDEFGEKTVSVLLDDEESDMVFIDHPSVEMSVENSLSTYEP
HGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARL
ITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKAT
ASKMKTSRTHISLHLAKELLQKICLSDISKSKSCENLHVL*

RE10036.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11972-PA 744 GF11972-PA 1..744 1..740 3394 91.3 Plus
Dana\GF12615-PA 500 GF12615-PA 145..500 423..740 662 45.8 Plus
Dana\GF21095-PA 869 GF21095-PA 360..637 426..691 527 44.1 Plus
Dana\GF12807-PA 316 GF12807-PA 97..316 522..740 378 39.4 Plus
Dana\GF13570-PA 257 GF13570-PA 53..226 527..702 248 30.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21907-PA 742 GG21907-PA 1..742 1..740 3885 98 Plus
Dere\GG20915-PA 542 GG20915-PA 187..542 423..740 659 45.8 Plus
Dere\GG18570-PA 1078 GG18570-PA 565..832 425..691 509 43.2 Plus
Dere\GG22105-PA 415 GG22105-PA 217..393 517..693 348 42.7 Plus
Dere\GG22302-PA 264 GG22302-PA 11..233 488..702 266 28.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22964-PA 759 GH22964-PA 1..759 1..740 3002 76.2 Plus
Dgri\GH21202-PA 522 GH21202-PA 147..522 423..740 630 43.1 Plus
Dgri\GH17909-PA 1003 GH17909-PA 502..793 449..727 522 40.8 Plus
Dgri\GH21863-PA 287 GH21863-PA 69..287 523..740 366 39.4 Plus
Dgri\GH19819-PA 265 GH19819-PA 21..242 499..708 256 29.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
Rgk2-PA 740 CG34390-PA 1..740 1..740 3862 100 Plus
Rgk2-PC 742 CG34390-PC 1..742 1..740 3849 99.7 Plus
Rgk1-PA 498 CG44011-PA 150..498 431..740 692 46.5 Plus
Rgk1-PB 1379 CG44011-PB 1031..1379 431..740 692 46.5 Plus
Rgk1-PC 514 CG44011-PC 150..514 431..740 665 44.5 Plus
CG42541-PF 1399 CG42541-PF 855..1183 381..715 550 39.8 Plus
CG42541-PE 1417 CG42541-PE 873..1201 381..715 550 39.8 Plus
CG42541-PD 1417 CG42541-PD 873..1201 381..715 550 39.8 Plus
CG42541-PC 1418 CG42541-PC 874..1202 381..715 550 39.8 Plus
Rgk3-PG 449 CG34397-PG 90..449 385..740 435 33.8 Plus
Rgk3-PF 449 CG34397-PF 90..449 385..740 435 33.8 Plus
Rgk3-PC 449 CG34397-PC 90..449 385..740 435 33.8 Plus
Rgk3-PE 486 CG34397-PE 90..395 385..693 399 34.8 Plus
Ric-PB 264 CG8418-PB 6..240 483..709 267 28.2 Plus
Ric-PA 264 CG8418-PA 6..240 483..709 267 28.2 Plus
Rap1-PC 184 CG1956-PC 4..179 527..702 224 29.6 Plus
Rap1-PB 184 CG1956-PB 4..179 527..702 224 29.6 Plus
Rap1-PA 184 CG1956-PA 4..179 527..702 224 29.6 Plus
Rala-PC 201 CG2849-PC 9..188 524..705 224 30.3 Plus
Rala-PA 201 CG2849-PA 9..188 524..705 224 30.3 Plus
Rap2l-PA 182 CG3204-PA 4..174 527..698 211 31.6 Plus
Rala-PB 197 CG2849-PB 9..180 524..697 201 29.4 Plus
Rheb-PB 182 CG1081-PB 2..163 523..686 184 30.3 Plus
Rheb-PA 182 CG1081-PA 2..163 523..686 184 30.3 Plus
Rab6-PB 208 CG6601-PB 9..182 523..698 181 28.7 Plus
Rab6-PA 208 CG6601-PA 9..182 523..698 181 28.7 Plus
Rab8-PC 207 CG8287-PC 9..179 527..699 171 24.7 Plus
Rab8-PA 207 CG8287-PA 9..179 527..699 171 24.7 Plus
Rab2-PB 213 CG3269-PB 7..167 527..689 170 25.6 Plus
Rab2-PA 213 CG3269-PA 7..167 527..689 170 25.6 Plus
Rab21-PC 222 CG17515-PC 10..190 523..705 170 28.3 Plus
Rab21-PD 222 CG17515-PD 10..190 523..705 170 28.3 Plus
Ras85D-PA 189 CG9375-PA 4..177 527..704 163 28.6 Plus
Rab1-PA 205 CG3320-PA 3..190 518..705 163 27.7 Plus
RabX4-PA 213 CG31118-PA 7..177 525..698 163 25.6 Plus
Rab14-PD 215 CG4212-PD 12..163 527..680 160 29.3 Plus
Rab14-PA 215 CG4212-PA 12..163 527..680 160 29.3 Plus
Rab14-PB 239 CG4212-PB 36..187 527..680 160 29.3 Plus
CG8500-PB 233 CG8500-PB 19..206 527..703 158 27.7 Plus
CG8500-PA 233 CG8500-PA 19..206 527..703 158 27.7 Plus
Rab10-PA 204 CG17060-PA 10..183 527..698 157 25.7 Plus
CG8519-PA 207 CG8519-PA 17..188 528..704 153 25.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18451-PA 763 GI18451-PA 1..763 1..740 2960 77.8 Plus
Dmoj\GI20491-PA 526 GI20491-PA 152..526 423..740 632 42.9 Plus
Dmoj\GI16048-PA 485 GI16048-PA 6..282 431..695 510 43.1 Plus
Dmoj\GI20364-PA 443 GI20364-PA 186..350 523..693 329 43 Plus
Dmoj\GI20407-PA 267 GI20407-PA 21..242 499..710 252 28.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17084-PA 750 GL17084-PA 1..750 1..740 3085 81 Plus
Dper\GL10448-PA 521 GL10448-PA 148..521 423..740 626 43.3 Plus
Dper\GL14548-PA 709 GL14548-PA 249..556 412..727 473 39 Plus
Dper\GL19979-PA 262 GL19979-PA 11..239 488..708 254 28.2 Plus
Dper\GL21674-PA 182 GL21674-PA 2..163 523..686 213 32.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13469-PA 733 GA13469-PA 1..733 1..740 3031 82.6 Plus
Dpse\GA22051-PA 522 GA22051-PA 147..522 423..740 627 43.3 Plus
Dpse\GA23918-PA 525 GA23918-PA 43..372 412..727 480 38.8 Plus
Dpse\GA24688-PA 320 GA24688-PA 95..320 523..740 385 41.7 Plus
Dpse\GA21063-PA 262 GA21063-PA 11..239 488..708 254 28.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21897-PA 725 GM21897-PA 18..725 1..740 3555 91.2 Plus
Dsec\GM19838-PA 532 GM19838-PA 177..532 423..740 663 46 Plus
Dsec\GM12712-PA 1068 GM12712-PA 555..822 425..691 517 43.9 Plus
Dsec\GM15824-PA 281 GM15824-PA 93..261 523..697 337 42 Plus
Dsec\GM20091-PA 264 GM20091-PA 11..233 488..702 264 28.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11394-PA 722 GD11394-PA 1..722 1..740 3815 96.8 Plus
Dsim\GD25328-PA 536 GD25328-PA 181..536 423..740 663 46 Plus
Dsim\GD16319-PA 1069 GD16319-PA 556..823 425..691 516 43.9 Plus
Dsim\GD11581-PA 281 GD11581-PA 93..257 523..693 336 42.4 Plus
Dsim\GD25569-PA 264 GD25569-PA 11..233 488..702 264 28.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21536-PA 767 GJ21536-PA 1..767 1..740 2950 78.4 Plus
Dvir\GJ22341-PA 521 GJ22341-PA 149..521 423..740 634 42.1 Plus
Dvir\GJ15559-PA 1453 GJ15559-PA 1067..1272 527..725 484 46.1 Plus
Dvir\GJ22091-PA 297 GJ22091-PA 79..297 523..740 362 38.9 Plus
Dvir\GJ20079-PA 267 GJ20079-PA 21..242 499..710 255 29.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:46:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17958-PA 768 GK17958-PA 1..768 1..740 2912 78.8 Plus
Dwil\GK20802-PA 519 GK20802-PA 150..519 423..740 633 43.2 Plus
Dwil\GK15798-PA 445 GK15798-PA 227..445 523..740 381 40 Plus
Dwil\GK24932-PA 235 GK24932-PA 9..210 524..723 222 29 Plus
Dwil\GK20561-PA 184 GK20561-PA 4..164 527..689 212 28.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:46:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11981-PA 743 GE11981-PA 1..743 1..740 3886 98.1 Plus
Dyak\GE13853-PA 536 GE13853-PA 181..536 423..740 663 46 Plus
Dyak\GE16882-PA 1075 GE16882-PA 562..859 425..715 528 41.6 Plus
Dyak\GE12184-PA 324 GE12184-PA 93..324 523..740 372 38.1 Plus
Dyak\GE14098-PA 264 GE14098-PA 11..233 488..702 266 28.8 Plus

RE10036.hyp Sequence

Translation from 719 to 2941

> RE10036.hyp
MAQQQRSWDEGAVGGGSYGHPHSSHHKVPARAASNPLPCKGATPKLPRQY
HGGPTSSYNYGGYDTPRSPKITTTFAQDSCDDVSSSTPSSYYQTPPSGSI
DDSASLLSGRTTARSPKSQCQFVFDAVSPSHGRKFEYYEPISPDDGALYY
DPPSSPRRQGSKKLMRTKTPLDPVPQLTTTGVDESMAVAMAMGGAGGGGY
AQGGPNKRQRDEWELPVISKIEARNLSAAAGSSSAGGSYYGLKRDSCVTD
CTQLSMESGETGTQHTNSTMVTHTTTSFSFTEPEMEQEAGQPQLRRQRRH
AINITSNPGYQVLHSSHSTLDRTCSDSVVSLRYRKSTSDLTQDAEHELSG
CKPNKPKAHVEHKPRRRGSSKGGLAYLASRRSSRESMKSACSNASIVSND
DVGPLAFQSSNRGRQRRTSNFLELPVPDHVRPRVCSLPERPYNPRASDDL
YRLRHFSISKGNVVNCGDSIISRRSRSNTSVNSTNSRASERSPFEGSCCG
AGYANVDSLPATPDDSENLDPPPPARYRVVMLGDAGVGKTALVNQFMTSE
YMHTYDASLDDEFGEKTVSVLLDDEESDMVFIDHPSVEMSVENSLSTYEP
HGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARL
ITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKAT
ASKMKTSRTHISLHLAKELLQKICLSDISKSKSCENLHVL*

RE10036.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
Rgk2-PA 740 CG34390-PA 1..740 1..740 3862 100 Plus
Rgk2-PC 742 CG34390-PC 1..742 1..740 3849 99.7 Plus
Rgk1-PA 498 CG44011-PA 150..498 431..740 692 46.5 Plus
Rgk1-PB 1379 CG44011-PB 1031..1379 431..740 692 46.5 Plus
Rgk1-PC 514 CG44011-PC 150..514 431..740 665 44.5 Plus