BDGP Sequence Production Resources |
Search the DGRC for RE10231
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 102 |
Well: | 31 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4658-RA |
Protein status: | RE10231.pep: gold |
Preliminary Size: | 1996 |
Sequenced Size: | 2247 |
Gene | Date | Evidence |
---|---|---|
CG4658 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4658 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4658 | 2003-02-20 | Blastp of sequenced clone |
CG4658 | 2008-04-29 | Release 5.5 accounting |
CG4658 | 2008-08-15 | Release 5.9 accounting |
CG4658 | 2008-12-18 | 5.12 accounting |
2247 bp (2247 high quality bases) assembled on 2003-02-20
GenBank Submission: BT004863
> RE10231.complete AATCAGCATTAATTTGCAACTCCAGCACGGTCACATTCGATTGGTTTTGC GACGCGGCGCAGTTGTTTCTTTGGCCAAAACTTCCCTGCACCTGTTGCGC CTCGCCAATTTGTTTTCAGTGCAAACCTGCGTTTGGCCTTTTTTATGCCC TTTCGTTGTACGTTTCCACTGCCCCAAATTAATTGCGTCGAAACATCACC AAGATGGGCAACACGAGTTCCAAGGGCGAGTCGGACGCCAGTGAGCCACC CCTGGAGGGAGGCAAGCCGTACAAGCAGCATCAGCAGCACAAGTCCAGTG ATGCTTCCCACAACGGAGTCTCTGACGTGGGCGGCAGCCACAACAATCTA AAGGTGACGCAGGCGCAGGGCTCGATGACCAGGTCGGCTTCTGGCGCGGA TGTCACCGAGAAGTACCTCACCCAGCTGGTGCCGGTGGAGAAGCTAGCCG AGATTCTCAGGGAGCAGACGTCGTCCAAACTGGGCATTAATGGCATTGTG GCAGATGTCTTTGTGTCACAAGTCTTTCCGCAGTACGCCGACCTGGGACA GCGGCTGTTCAACCTGATGCACTCCAACTCCAAGGCCACAACGAAACATC TGGGCGCCGTTGCTTTCCGGCAACAGTGCGAACGCTTTTTGGGCATCATG GATGACTCGAAGACGCTGGAGTGCTACATTAAGATGTACGCCCAGGAGGA GAATCCGGACCAAATTGACAAGACGGGAGTGACGCGGTTGCTCCACATCT GCTACACCATTGCCATGCAGCACTCGGGCAACGCCGTGCTGTGCCCGGCC ATCAACCGCACGTTCGGTTCGGTGACCAAGTCCATTTTCCTGTGCCACGA CAGTATGAGTCTGGGCTACGTTTGCCGCTGGTTCGAGCAGAACCTGATGC GGCTGGTGCTCCTCGTGCACAAGTACTGTGTGCACACTTTGTCAACCGCT TACCGTGGTCTAGAGCAGCAGAATCAGTCATGCGGCATTGAGTTGCAGAC GCCGGTGCTTGAGCAACGTAATCCCTTCACAGATACCACCGACTTTAGTG GCGGTAGCACGAGGGAGATGGACTCGCTGATGCCGCTTTCGCAAGCCTGG CTGCTGGCTGGAGCTCTGCCGCCACTCTACTCCAAGCCCCAAACTGTGAC ACCGCCGGCCACAAAGGGAAACAACAACGTTAGCGCGTCCACAGCGGTAC AGATTTTCAAGGACAAGCTGTCGATGATGCCGTCACACTGGACACTGCTG TACAACTCCAATGAGCATGGCGTGGGAGCCAACCGGTTTCTGCACCACGT CCTCGGCTATCGGGGTCCAACACTGGTCCTGCTCCATACCAAGGATGAAC AGACGTATTGCGTGGCCTCACCCAGTGAGTGGAAGGAAACGCATCTGTTT GTGGGCGGCGAGGGCAGCTGTGTTATCCAGCTGCTGCCCAAGTTTGTGAT ACTGGAAAAAAAGCCCAACATTCTTTACCTAAACACCAGCATACGCGGCT ATCCGAAGGGCTTACGTGCCGGCGCCGATCCGCGAAAACCCATTATAGCA GTCGATGAGCATTTCGAGAATATTGACTGCAAGGGACTGGCGGCTGGACT CATGTCCATAGAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGC AATTGGACATCAAGAAGTGGCAAATCAAGGAGGCCGAACGGCAGCGGACA GTGAAGCTCACGGCCGCCGACTGGATGGACCATCCGGATCGATATCTCCT CGAGCTGGGCGGCAGGCAGAACTACAACAATTGATCGCGACTGCTGCGCA TATATGTATTCTAAAAGCAATGGATGGGGAATGCCATTCGAAATGAGGGG CATGCCACATTGAAATTTACTGGGATTTGCTATAGTTATGCACTCGCAGC ACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGAT ATTCGGTTTACTTGTTTTTCTTTCTATTATCAGTGTTTAGTACTCGATTT GATTTATGTATGTTCGTAACGAGAATTCCGTGAATGCCTTTAAATGTACT TCGGTCTACTTGTGTATCCATGTATATGTCACACATTGTCTTCGTTTTCG TCAACTTTTTCCTTTAGGTCTTCTGTTATGTTCCGTATCTTTGTTCAAAA ATGTAAAAAAGCAAGTATTATGAAAAGACATAGGATTCGAAGTGCTTAAA CAAATATTTCAATAAATGTTACAAATGAAATGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4658-RC | 2234 | CG4658-RC | 1..2234 | 1..2234 | 11170 | 100 | Plus |
CG4658-RA | 2333 | CG4658-RA | 142..2333 | 43..2234 | 10960 | 100 | Plus |
CG4658-RB | 2260 | CG4658-RB | 69..2260 | 43..2234 | 10960 | 100 | Plus |
CG4658-RA | 2333 | CG4658-RA | 1..47 | 1..47 | 235 | 100 | Plus |
CG4658-RB | 2260 | CG4658-RB | 1..43 | 1..43 | 215 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9956890..9957818 | 515..1443 | 4645 | 100 | Plus |
chr2L | 23010047 | chr2L | 9958479..9959099 | 1612..2232 | 3075 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 9956359..9956831 | 43..515 | 2365 | 100 | Plus |
chr2L | 23010047 | chr2L | 9957871..9958044 | 1442..1615 | 870 | 100 | Plus |
chr2L | 23010047 | chr2L | 9956218..9956264 | 1..47 | 235 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9957959..9958887 | 515..1443 | 4645 | 100 | Plus |
2L | 23513712 | 2L | 9959548..9960170 | 1612..2234 | 3115 | 100 | Plus |
2L | 23513712 | 2L | 9957428..9957900 | 43..515 | 2365 | 100 | Plus |
2L | 23513712 | 2L | 9958940..9959113 | 1442..1615 | 870 | 100 | Plus |
2L | 23513712 | 2L | 9957287..9957333 | 1..47 | 235 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9957959..9958887 | 515..1443 | 4645 | 100 | Plus |
2L | 23513712 | 2L | 9959548..9960170 | 1612..2234 | 3115 | 100 | Plus |
2L | 23513712 | 2L | 9957428..9957900 | 43..515 | 2365 | 100 | Plus |
2L | 23513712 | 2L | 9958940..9959113 | 1442..1615 | 870 | 100 | Plus |
2L | 23513712 | 2L | 9957287..9957333 | 1..47 | 235 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3759..3811 | 1977..1924 | 132 | 76.4 | Minus |
TAHRE | 10463 | TAHRE OSV 10463bp | 9087..9147 | 1987..1925 | 121 | 70.3 | Minus |
TAHRE | 10463 | TAHRE OSV 10463bp | 7683..7741 | 1988..1924 | 120 | 73.8 | Minus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2717..2813 | 2023..1927 | 115 | 63 | Minus |
TART-C | 11124 | TART-C TARTC 11124bp | 4169..4265 | 2023..1927 | 115 | 63 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9956218..9956260 | 1..43 | 100 | -> | Plus |
chr2L | 9956360..9956831 | 44..515 | 100 | -> | Plus |
chr2L | 9956891..9957816 | 516..1441 | 100 | -> | Plus |
chr2L | 9957871..9958042 | 1442..1613 | 100 | -> | Plus |
chr2L | 9958481..9959099 | 1614..2232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RA | 1..1581 | 204..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RA | 1..1581 | 204..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..1581 | 204..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RA | 1..1581 | 204..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..1581 | 204..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..2232 | 1..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..2232 | 1..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..2224 | 9..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..2232 | 1..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4658-RC | 1..2224 | 9..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9957287..9957329 | 1..43 | 100 | -> | Plus |
2L | 9957429..9957900 | 44..515 | 100 | -> | Plus |
2L | 9957960..9958885 | 516..1441 | 100 | -> | Plus |
2L | 9958940..9959111 | 1442..1613 | 100 | -> | Plus |
2L | 9959550..9960168 | 1614..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9957287..9957329 | 1..43 | 100 | -> | Plus |
2L | 9957429..9957900 | 44..515 | 100 | -> | Plus |
2L | 9957960..9958885 | 516..1441 | 100 | -> | Plus |
2L | 9958940..9959111 | 1442..1613 | 100 | -> | Plus |
2L | 9959550..9960168 | 1614..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9957287..9957329 | 1..43 | 100 | -> | Plus |
2L | 9957429..9957900 | 44..515 | 100 | -> | Plus |
2L | 9957960..9958885 | 516..1441 | 100 | -> | Plus |
2L | 9958940..9959111 | 1442..1613 | 100 | -> | Plus |
2L | 9959550..9960168 | 1614..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9958940..9959111 | 1442..1613 | 100 | -> | Plus |
arm_2L | 9957287..9957329 | 1..43 | 100 | -> | Plus |
arm_2L | 9957429..9957900 | 44..515 | 100 | -> | Plus |
arm_2L | 9957960..9958885 | 516..1441 | 100 | -> | Plus |
arm_2L | 9959550..9960168 | 1614..2232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9957429..9957900 | 44..515 | 100 | -> | Plus |
2L | 9957960..9958885 | 516..1441 | 100 | -> | Plus |
2L | 9958940..9959111 | 1442..1613 | 100 | -> | Plus |
2L | 9959550..9960168 | 1614..2232 | 100 | Plus | |
2L | 9957287..9957329 | 1..43 | 100 | -> | Plus |
Translation from 203 to 1783
> RE10231.pep MGNTSSKGESDASEPPLEGGKPYKQHQQHKSSDASHNGVSDVGGSHNNLK VTQAQGSMTRSASGADVTEKYLTQLVPVEKLAEILREQTSSKLGINGIVA DVFVSQVFPQYADLGQRLFNLMHSNSKATTKHLGAVAFRQQCERFLGIMD DSKTLECYIKMYAQEENPDQIDKTGVTRLLHICYTIAMQHSGNAVLCPAI NRTFGSVTKSIFLCHDSMSLGYVCRWFEQNLMRLVLLVHKYCVHTLSTAY RGLEQQNQSCGIELQTPVLEQRNPFTDTTDFSGGSTREMDSLMPLSQAWL LAGALPPLYSKPQTVTPPATKGNNNVSASTAVQIFKDKLSMMPSHWTLLY NSNEHGVGANRFLHHVLGYRGPTLVLLHTKDEQTYCVASPSEWKETHLFV GGEGSCVIQLLPKFVILEKKPNILYLNTSIRGYPKGLRAGADPRKPIIAV DEHFENIDCKGLAAGLMSIEVWGCGDKSSREVQLDIKKWQIKEAERQRTV KLTAADWMDHPDRYLLELGGRQNYNN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15732-PA | 531 | GF15732-PA | 1..531 | 1..526 | 2563 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10073-PA | 526 | GG10073-PA | 1..526 | 1..526 | 2785 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11062-PA | 542 | GH11062-PA | 4..542 | 3..526 | 2247 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4658-PD | 526 | CG4658-PD | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PA | 526 | CG4658-PA | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PC | 526 | CG4658-PC | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PB | 526 | CG4658-PB | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PE | 491 | CG4658-PE | 1..471 | 1..471 | 2476 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17579-PA | 543 | GI17579-PA | 4..543 | 3..526 | 2268 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18950-PA | 495 | GL18950-PA | 3..495 | 34..526 | 2385 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18335-PA | 536 | GA18335-PA | 1..536 | 1..526 | 2492 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17843-PA | 526 | GM17843-PA | 1..526 | 1..526 | 2843 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23644-PA | 526 | GD23644-PA | 1..526 | 1..526 | 2848 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17922-PA | 538 | GJ17922-PA | 4..538 | 3..526 | 2239 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15579-PA | 404 | GK15579-PA | 85..404 | 213..526 | 1544 | 89.1 | Plus |
Dwil\GK24123-PA | 303 | GK24123-PA | 1..303 | 230..526 | 1431 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18885-PA | 527 | GE18885-PA | 1..527 | 1..526 | 2769 | 97 | Plus |
Translation from 203 to 1783
> RE10231.hyp MGNTSSKGESDASEPPLEGGKPYKQHQQHKSSDASHNGVSDVGGSHNNLK VTQAQGSMTRSASGADVTEKYLTQLVPVEKLAEILREQTSSKLGINGIVA DVFVSQVFPQYADLGQRLFNLMHSNSKATTKHLGAVAFRQQCERFLGIMD DSKTLECYIKMYAQEENPDQIDKTGVTRLLHICYTIAMQHSGNAVLCPAI NRTFGSVTKSIFLCHDSMSLGYVCRWFEQNLMRLVLLVHKYCVHTLSTAY RGLEQQNQSCGIELQTPVLEQRNPFTDTTDFSGGSTREMDSLMPLSQAWL LAGALPPLYSKPQTVTPPATKGNNNVSASTAVQIFKDKLSMMPSHWTLLY NSNEHGVGANRFLHHVLGYRGPTLVLLHTKDEQTYCVASPSEWKETHLFV GGEGSCVIQLLPKFVILEKKPNILYLNTSIRGYPKGLRAGADPRKPIIAV DEHFENIDCKGLAAGLMSIEVWGCGDKSSREVQLDIKKWQIKEAERQRTV KLTAADWMDHPDRYLLELGGRQNYNN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4658-PD | 526 | CG4658-PD | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PA | 526 | CG4658-PA | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PC | 526 | CG4658-PC | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PB | 526 | CG4658-PB | 1..526 | 1..526 | 2780 | 100 | Plus |
CG4658-PE | 491 | CG4658-PE | 1..471 | 1..471 | 2476 | 100 | Plus |