BDGP Sequence Production Resources |
Search the DGRC for RE10288
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 102 |
Well: | 88 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15554-RA |
Protein status: | RE10288.pep: gold |
Preliminary Size: | 411 |
Sequenced Size: | 814 |
Gene | Date | Evidence |
---|---|---|
CG15554 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15554 | 2002-06-10 | Blastp of sequenced clone |
CG15554 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15554 | 2008-04-29 | Release 5.5 accounting |
CG15554 | 2008-08-15 | Release 5.9 accounting |
CG15554 | 2008-12-18 | 5.12 accounting |
814 bp (814 high quality bases) assembled on 2002-06-10
GenBank Submission: AY071020
> RE10288.complete AGTTAGCTGCTGAGTTAACTGGAGATCGGTCGAAAATTTAGAGTGCGAAC CTCGAAAACAACGTGTTGGATACGAATTTACGGACAATGTACAGGACTTT TGTTTGGCTGTTAACCCTAATGGCAGTGGCAAGTGCCGCCACCTCGGGTC GGGACTACTTGCCGCGCCCCCCCGCCAAAGCCTATGTCTACGGCACGCCC CCGCCCAGCACGATGGCTCAGTTGCGACGGATAATCCAAGGTCACCTGGA GCGCTTCCAGCTGGCGGAGCAGGCCCACTTTTCCCGCCGCGCCAATGTGC AGCTGGGGAAATCGGAAGTGCCGGCGGACAGAAAACCGCTGGCGATGCAA TTGTGGGTGGTTCGCACGCCCGCCATTTCCGGCGCGGCCTCGGATAACGT CCTCGATTACGCCCTGCCGCCCAACACGCCCACTCCGAAGGACTACGCGC ACAAGTTCCTGCCCGAGGGCAAGGATGTGGTACCCGGAAGCTCTTACATA CCGCTGCGGTTGCTGGTGATAAAGCGCTGAAGCTGATATATGAATCTTGG GCGGCGGCTTGCCTTTTGTTGTTCGAAAACAAGTTCCGGCGGAATGCCGA TACCCGACACTTAATGCCCAACCAGTAGTTGGCTAATTGGCTTTAAGCTT ACTGGTTCCTAGCGCTAGTCTAGCAATAGTTTAGTTGTTTATGTTAAGGC CCAAGTTCGCTAATCTAAATTAAGCCACCACATCCCGGGGTCCGTGACTA AGACTTCCGACCTTATCGCATCCAATAAATCCAAAACTAAGACTCAGCCA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15554-RA | 941 | CG15554-RA | 107..906 | 1..800 | 3985 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26948541..26948647 | 1..107 | 99 | -> | Plus |
chr3R | 26949034..26949725 | 108..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..444 | 87..530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..444 | 87..530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..444 | 87..530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..444 | 87..530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..444 | 87..530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..799 | 1..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..799 | 1..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..799 | 1..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 1..799 | 1..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15554-RA | 3..801 | 1..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31126151..31126257 | 1..107 | 99 | -> | Plus |
3R | 31126644..31127335 | 108..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31126151..31126257 | 1..107 | 99 | -> | Plus |
3R | 31126644..31127335 | 108..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31126151..31126257 | 1..107 | 99 | -> | Plus |
3R | 31126644..31127335 | 108..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26951873..26951979 | 1..107 | 99 | -> | Plus |
arm_3R | 26952366..26953057 | 108..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30867475..30868166 | 108..799 | 100 | Plus | |
3R | 30866982..30867088 | 1..107 | 99 | -> | Plus |
Translation from 86 to 529
> RE10288.pep MYRTFVWLLTLMAVASAATSGRDYLPRPPAKAYVYGTPPPSTMAQLRRII QGHLERFQLAEQAHFSRRANVQLGKSEVPADRKPLAMQLWVVRTPAISGA ASDNVLDYALPPNTPTPKDYAHKFLPEGKDVVPGSSYIPLRLLVIKR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18415-PA | 146 | GF18415-PA | 1..146 | 1..147 | 536 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11791-PA | 147 | GG11791-PA | 1..147 | 1..147 | 725 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13974-PA | 131 | GH13974-PA | 1..129 | 1..146 | 269 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15554-PA | 147 | CG15554-PA | 1..147 | 1..147 | 764 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22318-PA | 143 | GI22318-PA | 3..143 | 1..147 | 265 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13539-PA | 141 | GL13539-PA | 1..141 | 1..147 | 427 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13812-PA | 141 | GA13812-PA | 1..141 | 1..147 | 427 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12921-PA | 147 | GM12921-PA | 1..147 | 1..147 | 733 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21560-PA | 147 | GD21560-PA | 1..147 | 1..147 | 745 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10505-PA | 142 | GJ10505-PA | 1..142 | 1..147 | 314 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22613-PA | 148 | GK22613-PA | 1..148 | 1..147 | 335 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10919-PA | 147 | GE10919-PA | 1..147 | 1..147 | 732 | 93.9 | Plus |
Translation from 86 to 529
> RE10288.hyp MYRTFVWLLTLMAVASAATSGRDYLPRPPAKAYVYGTPPPSTMAQLRRII QGHLERFQLAEQAHFSRRANVQLGKSEVPADRKPLAMQLWVVRTPAISGA ASDNVLDYALPPNTPTPKDYAHKFLPEGKDVVPGSSYIPLRLLVIKR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15554-PA | 147 | CG15554-PA | 1..147 | 1..147 | 764 | 100 | Plus |