BDGP Sequence Production Resources |
Search the DGRC for RE10350
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 103 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG33695-RC |
Protein status: | RE10350.pep: gold |
Sequenced Size: | 1306 |
Gene | Date | Evidence |
---|---|---|
CG32955 | 2005-01-26 | Blastp of sequenced clone |
CG33695 | 2008-04-29 | Release 5.5 accounting |
CG33695 | 2008-08-15 | Release 5.9 accounting |
cana | 2008-08-15 | Release 5.9 accounting |
CG33695 | 2008-12-18 | 5.12 accounting |
cana | 2008-12-18 | 5.12 accounting |
1306 bp (1306 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021320
> RE10350.complete TGTGTTGTGTACGGCGTCAGTGTTGAATAGCTGCGGACGCAAAACTACGT AAAATTACGACAAAAAAACAGCGCCCCGCGAAAAAAGGCCATGAACTCGG CAATCAAGGTGGGGGAGATATTCACGGCCGCCGGACAGGCGTTCAGCAGA CTGGGCGATCTAACCATGCAGCTGCATCCCAATGCGGAGTCGCCATCGGG TTCTCAGATCCGCCAGGCGCTGAAGAAGAAGGCCTTCGAGGACGCCGGCA TTCCCGCCAAGCAAGTGCCCGTCCAGCAGGTGCAACACGTTCTCCAGACG CTGCCACAACAGCAGCCGCAGCAGCCCCTTCAGCAGCCACCTCCTCAAGT ATTCAAGTCACAGCCAATCGTGCAGCACGTACAGCTGGTGGCGCAGCCAA AGCAGATCATCCTGCATCCACAGTCTAATACAACTACGACGGGCACGACG GTGACTGTTAAGCAGTACCAGCAGATGCAGAAGGCTGCGGCATTAGCGGC AGCCCAGGCTGCAGCCTCGACGGCCAACAACACGCCCACCATCACGGAGA ACATCATTATCCAGCAGCCCACTTCGACTACGGCGACAGTGGTGCAGCAG CCACATATGGTGTCCACCTGCTCGTCGACGCAGATCGTGGTGCCCGTTGT GTCGGCAGTGTCCACTGTTCCAACAGTACTCTCGCCCACGGTGGTGATTG CCGACGATGTGGTTAGCACCTCCAATCCTCCAGCGGCAGCGGCGACAGTA GGATCGCCAGCAGGGGCGCCAGCAGGCTTAAAGTGCGGACCAGACGTGTC CATGACCCTCAATCGCATCAATGTCCAGGAGAACGAGGTGGACGTGGAGG AGTGCCTGCCCGCAGAGGTGGTCAAGCTGGATTTTGTCAGCGAGGAGGTG GCCGGGTGAGGTTCGAGCCCTCGGAACGGGCTGGACTTCTTCTACTAGAT CTCCGGCCGCAGAACGAATCACGTAACTTGGAACAGAACCGCTACAAATC CAGATCGAGAACTCTTAAGCAAAAAGGTTGAGATGCCGCCCTAGCCCTAA GTCTAAACTGTTAAGTGTTGTCATATTTGATATACCCTGAAATCACCTTG TTCCGGGCCCCGGATGACAAATGAATTGTGCGATGTGGGGGACGAGTCTG TGGATCGCCAGCCACAGAGCGTAGATATTAATTGCGGAGCGTATATGCGC CGCCTAGACTTAAATTTACGCAAGACACAATAGTGCAAAGTACATAACGA CGATCGTGTAAGTTGAGAGTGAATAAACGAGCATTATTTTAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33695-RC | 1293 | CG33695-RC | 2..1292 | 2..1292 | 6440 | 99.9 | Plus |
cana-RA | 7987 | cana-RA | 6895..7986 | 201..1292 | 5445 | 99.9 | Plus |
CG33695-RA | 7987 | CG33695-RA | 6895..7986 | 201..1292 | 5445 | 99.9 | Plus |
cana-RA | 7987 | cana-RA | 6597..6795 | 2..200 | 995 | 100 | Plus |
CG33695-RA | 7987 | CG33695-RA | 6597..6795 | 2..200 | 995 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11277492..11278582 | 200..1290 | 5395 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 11276762..11276870 | 2..110 | 545 | 100 | Plus |
chr2L | 23010047 | chr2L | 11277130..11277223 | 107..200 | 470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11278754..11279846 | 200..1292 | 5450 | 99.9 | Plus |
2L | 23513712 | 2L | 11278024..11278132 | 2..110 | 545 | 100 | Plus |
2L | 23513712 | 2L | 11278392..11278485 | 107..200 | 470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11278754..11279846 | 200..1292 | 5450 | 99.9 | Plus |
2L | 23513712 | 2L | 11278024..11278132 | 2..110 | 545 | 100 | Plus |
2L | 23513712 | 2L | 11278392..11278485 | 107..200 | 470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..7028 | 275..581 | 198 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6939 | 274..404 | 169 | 58.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6941 | 300..518 | 163 | 58.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2373 | 274..337 | 140 | 68.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6827 | 274..340 | 137 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2860 | 274..347 | 136 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2602 | 295..605 | 135 | 54 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 92..194 | 237..337 | 132 | 60.2 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9122..9224 | 237..337 | 132 | 60.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1067..1108 | 295..336 | 129 | 78.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1091..1168 | 274..350 | 126 | 64.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11276761..11276868 | 1..108 | 99 | -> | Plus |
chr2L | 11277132..11277223 | 109..200 | 100 | -> | Plus |
chr2L | 11277493..11278582 | 201..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 1..819 | 91..909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 1..819 | 91..909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 1..819 | 91..909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 1..819 | 91..909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 1..819 | 91..909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 2..1290 | 2..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 2..1290 | 2..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 3..1292 | 1..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 2..1290 | 2..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33695-RC | 3..1292 | 1..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11278023..11278130 | 1..108 | 99 | -> | Plus |
2L | 11278394..11278485 | 109..200 | 100 | -> | Plus |
2L | 11278755..11279844 | 201..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11278023..11278130 | 1..108 | 99 | -> | Plus |
2L | 11278394..11278485 | 109..200 | 100 | -> | Plus |
2L | 11278755..11279844 | 201..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11278023..11278130 | 1..108 | 99 | -> | Plus |
2L | 11278394..11278485 | 109..200 | 100 | -> | Plus |
2L | 11278755..11279844 | 201..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11278023..11278130 | 1..108 | 99 | -> | Plus |
arm_2L | 11278394..11278485 | 109..200 | 100 | -> | Plus |
arm_2L | 11278755..11279844 | 201..1290 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11278755..11279844 | 201..1290 | 99 | Plus | |
2L | 11278023..11278130 | 1..108 | 99 | -> | Plus |
2L | 11278394..11278485 | 109..200 | 100 | -> | Plus |
Translation from 90 to 908
> RE10350.pep MNSAIKVGEIFTAAGQAFSRLGDLTMQLHPNAESPSGSQIRQALKKKAFE DAGIPAKQVPVQQVQHVLQTLPQQQPQQPLQQPPPQVFKSQPIVQHVQLV AQPKQIILHPQSNTTTTGTTVTVKQYQQMQKAAALAAAQAAASTANNTPT ITENIIIQQPTSTTATVVQQPHMVSTCSSTQIVVPVVSAVSTVPTVLSPT VVIADDVVSTSNPPAAAATVGSPAGAPAGLKCGPDVSMTLNRINVQENEV DVEECLPAEVVKLDFVSEEVAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14768-PA | 321 | GF14768-PA | 1..321 | 1..272 | 650 | 60.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23716-PA | 304 | GG23716-PA | 1..304 | 1..272 | 915 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13390-PA | 287 | GH13390-PA | 1..287 | 1..272 | 559 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33695-PC | 272 | CG33695-PC | 1..272 | 1..272 | 1357 | 100 | Plus |
CG33695-PD | 274 | CG33695-PD | 7..274 | 5..272 | 1332 | 99.3 | Plus |
CG33695-PE | 305 | CG33695-PE | 1..305 | 1..272 | 1313 | 89.2 | Plus |
CG33695-PF | 280 | CG33695-PF | 1..280 | 26..272 | 1192 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20672-PA | 311 | GI20672-PA | 1..90 | 1..57 | 260 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19553-PA | 309 | GL19553-PA | 1..309 | 1..272 | 573 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26007-PA | 308 | GA26007-PA | 1..308 | 1..272 | 616 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18984-PA | 304 | GM18984-PA | 1..304 | 1..272 | 911 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23773-PA | 304 | GD23773-PA | 1..304 | 1..272 | 913 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13267-PA | 295 | GJ13267-PA | 1..295 | 1..272 | 516 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14901-PA | 309 | GK14901-PA | 1..309 | 1..272 | 540 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18521-PA | 304 | GE18521-PA | 1..304 | 1..272 | 898 | 86.2 | Plus |
Translation from 90 to 908
> RE10350.hyp MNSAIKVGEIFTAAGQAFSRLGDLTMQLHPNAESPSGSQIRQALKKKAFE DAGIPAKQVPVQQVQHVLQTLPQQQPQQPLQQPPPQVFKSQPIVQHVQLV AQPKQIILHPQSNTTTTGTTVTVKQYQQMQKAAALAAAQAAASTANNTPT ITENIIIQQPTSTTATVVQQPHMVSTCSSTQIVVPVVSAVSTVPTVLSPT VVIADDVVSTSNPPAAAATVGSPAGAPAGLKCGPDVSMTLNRINVQENEV DVEECLPAEVVKLDFVSEEVAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33695-PC | 272 | CG33695-PC | 1..272 | 1..272 | 1357 | 100 | Plus |
CG33695-PD | 274 | CG33695-PD | 7..274 | 5..272 | 1332 | 99.3 | Plus |
CG33695-PE | 305 | CG33695-PE | 1..305 | 1..272 | 1313 | 89.2 | Plus |
CG33695-PF | 280 | CG33695-PF | 1..280 | 26..272 | 1192 | 88.2 | Plus |