BDGP Sequence Production Resources |
Search the DGRC for RE10370
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 103 |
Well: | 70 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5895-RA |
Protein status: | RE10370.pep: gold |
Preliminary Size: | 1366 |
Sequenced Size: | 1526 |
Gene | Date | Evidence |
---|---|---|
CG5895 | 2001-12-14 | Blastp of sequenced clone |
CG5895 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5895 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5895 | 2008-04-29 | Release 5.5 accounting |
CG5895 | 2008-08-15 | Release 5.9 accounting |
CG5895 | 2008-12-18 | 5.12 accounting |
1526 bp (1526 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071021
> RE10370.complete AATTCGGCGCTGGATGCCGAGCAAACAACACGCCAAATCTATTCAAAGTG CACGTAATTTCTAATTGAGTGTCAAGTTTAGAGATGATAAAAGCGTATAT AATTTTGGTGCCTTTGCTGCAGTCAATTCTTTTGATTGGCTCCCTTGAAG CGGGCTGTCCTGTTTACCTAACCATTTCGCTGACGGGCAAAACCCTGCAG GACACCTTTCTCGAGATCAACTGGGGCCCGAACTGCTATGGACCACCCGA GTGGGTGGGTATCTACAGCCAGGATCCGGCCATCTCCAACTTTCAGCCAG ATCTGCGCATCAATGGTATTTTCAATATAACCGGCAAAATGCAGACGCCC ATCAAGCTGGGCAAGCTTCGTTTTCCCGGTGGCTGGAACAAAAAAGATAG TAGCGATCAGCCGGCAACGCAATATCTCAAGGGCAAGTGCCTGCCACACT ATGTGGCCAGCTACAATGGCACCGAGCTGCTCACGGTGGATTGCCTTAAG ATACAGCCCAATTGGATGGGCCAGATCAAGGACATCAATCGAATGGCGCT GAAGGATATCTTCCTGCCCGGCACACATGCCTCGGCGGCCGTCTTGGGCA GCTCCAGTAAGTCCAATTCGATACTGGTCAGGGATTACCTGGTGGCCCAG CAGCTCGATGTTTGGTCGCAGCTAGTCTTTGGCATACGTTATCTCGATTT AAGCATTGGATACAAGAACATGAACACCGAGAATGATGCCGATAATTTCT GGATAGCCAACGAGAATATGCTGATTACACCGCTACTCACAGTTCTACGT GATGTTCGTCAGTTTGTTAAAAGATCTGGCGAAGTGGTAGTCCTGGATTT TAGTAGTTTTCCCATCGGCTTTTACAAGCATCCAGAGATCTACAGCTCGC TATTCCGGCTAATTCGCCAGGAGCTGGGCGATGAGACCTATCGGCGTAAT GTGGGCAAGGACGAAAACTGTGCGAATCGAAATTTCAGCGAAATACTGCT TCAAAAGAGGCATCTGGTGATATTATTTCCCACGCAGGAGCTGCCCTATC CGGACAGAGAATCGAACATGCTCTGCCCGCCGTGGCAGCGTTTTAGCACC AGCTTTATGAATATTTCTCAAACTCTGGACTATATGCGTCTGTTGTTCAG CAGGAAGCCGGATTCTCCAGTTCGGAATGTTGGATGGATATTCACGGCGG TGAGGAGCATGGAGCAGACACTGAACGCCCACCAATTGCAGACCGCCAAG GAGCGGGCGGCGGTGCTGAATCCCAAGATAAATAAGTGGCTAAAAGGACC TTGGGGCTATAATGCCAATGTGGTTGCCATGGACTACTTTAGCAATACGA ATATCGTGGATCTGGCCATTCAAGTCAATGCGCACAAGGCTTTTGTCATG GCTAACCGCGATTATGTAAATTTGGAAATATTTAATTTGTACTGAATTGT ATAATACTATAGATCCCTGCTTCAGTAATAGATATGTTAATAAACAAAAC ACACAACTAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5895-RA | 1596 | CG5895-RA | 85..1596 | 1..1512 | 7560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16025491..16026051 | 149..709 | 2685 | 98.6 | Plus |
chr3L | 24539361 | chr3L | 16026534..16026986 | 1058..1510 | 2235 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 16026111..16026461 | 709..1059 | 1680 | 98.6 | Plus |
chr3L | 24539361 | chr3L | 16025247..16025396 | 1..150 | 750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16035731..16036291 | 149..709 | 2805 | 100 | Plus |
3L | 28110227 | 3L | 16036775..16037229 | 1058..1512 | 2275 | 100 | Plus |
3L | 28110227 | 3L | 16036351..16036701 | 709..1059 | 1755 | 100 | Plus |
3L | 28110227 | 3L | 16035487..16035636 | 1..150 | 750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16028831..16029391 | 149..709 | 2805 | 100 | Plus |
3L | 28103327 | 3L | 16029875..16030329 | 1058..1512 | 2275 | 100 | Plus |
3L | 28103327 | 3L | 16029451..16029801 | 709..1059 | 1755 | 100 | Plus |
3L | 28103327 | 3L | 16028587..16028736 | 1..150 | 750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16025247..16025396 | 1..150 | 100 | -> | Plus |
chr3L | 16025493..16026051 | 151..709 | 98 | -> | Plus |
chr3L | 16026112..16026461 | 710..1059 | 98 | -> | Plus |
chr3L | 16026536..16026986 | 1060..1510 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1362 | 84..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1362 | 84..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1362 | 84..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1362 | 84..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1362 | 84..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1510 | 1..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1510 | 1..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 3..1512 | 1..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 1..1510 | 1..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5895-RA | 3..1512 | 1..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16035487..16035636 | 1..150 | 100 | -> | Plus |
3L | 16035733..16036291 | 151..709 | 100 | -> | Plus |
3L | 16036352..16036701 | 710..1059 | 100 | -> | Plus |
3L | 16036777..16037227 | 1060..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16035487..16035636 | 1..150 | 100 | -> | Plus |
3L | 16035733..16036291 | 151..709 | 100 | -> | Plus |
3L | 16036352..16036701 | 710..1059 | 100 | -> | Plus |
3L | 16036777..16037227 | 1060..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16035487..16035636 | 1..150 | 100 | -> | Plus |
3L | 16035733..16036291 | 151..709 | 100 | -> | Plus |
3L | 16036352..16036701 | 710..1059 | 100 | -> | Plus |
3L | 16036777..16037227 | 1060..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16028587..16028736 | 1..150 | 100 | -> | Plus |
arm_3L | 16028833..16029391 | 151..709 | 100 | -> | Plus |
arm_3L | 16029452..16029801 | 710..1059 | 100 | -> | Plus |
arm_3L | 16029877..16030327 | 1060..1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16028833..16029391 | 151..709 | 100 | -> | Plus |
3L | 16029452..16029801 | 710..1059 | 100 | -> | Plus |
3L | 16029877..16030327 | 1060..1510 | 100 | Plus | |
3L | 16028587..16028736 | 1..150 | 100 | -> | Plus |
Translation from 83 to 1444
> RE10370.pep MIKAYIILVPLLQSILLIGSLEAGCPVYLTISLTGKTLQDTFLEINWGPN CYGPPEWVGIYSQDPAISNFQPDLRINGIFNITGKMQTPIKLGKLRFPGG WNKKDSSDQPATQYLKGKCLPHYVASYNGTELLTVDCLKIQPNWMGQIKD INRMALKDIFLPGTHASAAVLGSSSKSNSILVRDYLVAQQLDVWSQLVFG IRYLDLSIGYKNMNTENDADNFWIANENMLITPLLTVLRDVRQFVKRSGE VVVLDFSSFPIGFYKHPEIYSSLFRLIRQELGDETYRRNVGKDENCANRN FSEILLQKRHLVILFPTQELPYPDRESNMLCPPWQRFSTSFMNISQTLDY MRLLFSRKPDSPVRNVGWIFTAVRSMEQTLNAHQLQTAKERAAVLNPKIN KWLKGPWGYNANVVAMDYFSNTNIVDLAIQVNAHKAFVMANRDYVNLEIF NLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23760-PA | 466 | GF23760-PA | 9..452 | 8..450 | 1803 | 73.9 | Plus |
Dana\GF21553-PA | 479 | GF21553-PA | 173..479 | 125..438 | 266 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15945-PA | 453 | GG15945-PA | 1..452 | 1..452 | 2167 | 90.3 | Plus |
Dere\GG23759-PA | 481 | GG23759-PA | 184..481 | 132..438 | 256 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16059-PA | 450 | GH16059-PA | 20..448 | 23..451 | 1679 | 68.5 | Plus |
Dgri\GH11570-PA | 476 | GH11570-PA | 168..473 | 123..435 | 240 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5895-PA | 453 | CG5895-PA | 1..453 | 1..453 | 2392 | 100 | Plus |
CG5895-PC | 368 | CG5895-PC | 1..368 | 86..453 | 1940 | 100 | Plus |
CG14945-PA | 482 | CG14945-PA | 185..482 | 132..438 | 270 | 26 | Plus |
CG14945-PB | 482 | CG14945-PB | 185..482 | 132..438 | 270 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12322-PA | 451 | GI12322-PA | 13..449 | 16..451 | 1682 | 67.7 | Plus |
Dmoj\GI17061-PA | 471 | GI17061-PA | 183..468 | 123..435 | 189 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25082-PA | 152 | GL25082-PA | 23..151 | 323..450 | 565 | 79.1 | Plus |
Dper\GL16151-PA | 485 | GL16151-PA | 177..482 | 123..435 | 255 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19210-PA | 456 | GA19210-PA | 21..455 | 17..450 | 1825 | 74.7 | Plus |
Dpse\GA13372-PA | 485 | GA13372-PA | 177..482 | 123..435 | 252 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25579-PA | 453 | GM25579-PA | 1..453 | 1..453 | 2343 | 95.8 | Plus |
Dsec\GM26709-PA | 285 | GM26709-PA | 8..285 | 151..438 | 221 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14591-PA | 454 | GD14591-PA | 1..454 | 1..453 | 2351 | 96.7 | Plus |
Dsim\GD23811-PA | 466 | GD23811-PA | 147..466 | 111..438 | 269 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13260-PA | 450 | GJ13260-PA | 8..447 | 11..450 | 1705 | 68.6 | Plus |
Dvir\GJ17313-PA | 491 | GJ17313-PA | 183..488 | 123..435 | 241 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24125-PA | 454 | GK24125-PA | 12..453 | 15..453 | 1713 | 67.4 | Plus |
Dwil\GK21098-PA | 467 | GK21098-PA | 158..464 | 123..436 | 246 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19802-PA | 453 | GE19802-PA | 1..453 | 1..453 | 2228 | 90.3 | Plus |
Dyak\GE22886-PA | 453 | GE22886-PA | 1..453 | 1..453 | 2223 | 90.1 | Plus |
Dyak\GE18565-PA | 480 | GE18565-PA | 183..480 | 132..438 | 264 | 26.9 | Plus |
Translation from 83 to 1444
> RE10370.hyp MIKAYIILVPLLQSILLIGSLEAGCPVYLTISLTGKTLQDTFLEINWGPN CYGPPEWVGIYSQDPAISNFQPDLRINGIFNITGKMQTPIKLGKLRFPGG WNKKDSSDQPATQYLKGKCLPHYVASYNGTELLTVDCLKIQPNWMGQIKD INRMALKDIFLPGTHASAAVLGSSSKSNSILVRDYLVAQQLDVWSQLVFG IRYLDLSIGYKNMNTENDADNFWIANENMLITPLLTVLRDVRQFVKRSGE VVVLDFSSFPIGFYKHPEIYSSLFRLIRQELGDETYRRNVGKDENCANRN FSEILLQKRHLVILFPTQELPYPDRESNMLCPPWQRFSTSFMNISQTLDY MRLLFSRKPDSPVRNVGWIFTAVRSMEQTLNAHQLQTAKERAAVLNPKIN KWLKGPWGYNANVVAMDYFSNTNIVDLAIQVNAHKAFVMANRDYVNLEIF NLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5895-PA | 453 | CG5895-PA | 1..453 | 1..453 | 2392 | 100 | Plus |
CG5895-PC | 368 | CG5895-PC | 1..368 | 86..453 | 1940 | 100 | Plus |
CG14945-PA | 482 | CG14945-PA | 185..482 | 132..438 | 270 | 26 | Plus |
CG14945-PB | 482 | CG14945-PB | 185..482 | 132..438 | 270 | 26 | Plus |