Clone RE10379 Report

Search the DGRC for RE10379

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:103
Well:79
Vector:pFlc-1
Associated Gene/Transcriptfs(1)N-RA
Protein status:RE10379.pep: gold
Preliminary Size:6357
Sequenced Size:6585

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11411 2002-01-01 Sim4 clustering to Release 2
CG11411 2002-05-30 Blastp of sequenced clone
CG11411 2003-01-01 Sim4 clustering to Release 3
fs(1)N 2008-04-29 Release 5.5 accounting
fs(1)N 2008-08-15 Release 5.9 accounting
fs(1)N 2008-12-18 5.12 accounting

Clone Sequence Records

RE10379.complete Sequence

6585 bp (6585 high quality bases) assembled on 2002-05-30

GenBank Submission: AY118366

> RE10379.complete
GCATATCTGCCTCACGTGTTTGGTTTTTTGTCAATTAACTGTGTGCAAAA
TGCTAATTTGGCACCTGCTGCTCTGGCCAGCATTAATAGCCAGTGCCCCA
CCGCGGCCCCTGACCGACCAAAAGGCCGAGGTGGCCAAGCTGCGAAGCGA
ACTAGAAAAAGCTCTGGAACACGACGATGGAGGAGCACCACCAGGAGTGG
TGGTGGCACCCACGTGGACCCAGCAGGCGGGGCAAATGCCGCTTGGAAAG
ACCTCCAAAGTGGTGGTGGACCATAGCTCGCTGAGCAGCGCCTCCGCCAT
TCGCCAGGAGATTCAGCAGGCGGTGGCTCACCAGGGACAGAACCAAGAGG
TCCTCCAGCTGGAAGCTCTGCTGAAAGCAAGAGGCAGCAGCAAGGAGAGC
ACGGCTCAAGTGTCCACGTCCCGTCAGGAGGTGCTGGGAGCAACTGTACA
GGAAGCCAATGTGGTGGAGTCGCACTCGACATCGCAGACCGTGGACCTGG
AACAACTACAGCGCCTGGAGCTGTCCAAGAGGCGCACCCGCGACATGCTC
GTCCTGGGTCGCATTGAAGAGTTGCTCAACTACAGCATGCCGACGGATGT
GGATCGCTGGCTGACCCTCCAGGCCAATGGAAGCGTTTTCCTTGTGGGTC
AGCAGCAGGAGGGCCTCCTGGTTCTTTCAGAGGAATTCACTCCGTTGCAG
TCTTATGTCCACCCCTTTCCCATCACCGCCATGCTGGGAACAGATCGCTG
GAACAGAAGGGTGCATATGCAGGAAGGTTTGCTGGTGATGGCTTCCCAGG
ATCAGCTTATCTGGCTGCGATTGGAGCCCAGTCTTGGGCTAAAACCCATC
TGGCACTGGACGATTGGCTCGCATGTGACCAAGATTAGAGCATTCAACAT
GGAGGGACAAGATTACCTCGCTCTCGTAGCAAATCACACACTTAATATCT
ACGTCTATGATTTGGAAGCGGAGGAGTTCTGGATCGCACAACGTGTGCAA
ATGGCAGAGACGATCTCCAACCTGGCCATTCTCGATACAGGGAGGGAACT
GCTCTTGGCAGTGGGTCAGTGGGACGAGGTTCTGATATACGCCTGCACTT
CGAAGGGGCAACCGCTGCACTTGCGCCAACAAGTTGCTGCCCCCGAGGTG
GCCGGCGTCACTGCCTTCCAAATGGGCGGACGCAGCTACCTTGCGCTGGG
TGGAATAATGCCGCAGATCCTGGTCTACGTGCAGGGTCAGCTTGTGCCAC
GCACCATTCTTGGCCAGAACTTTGGATTTGTAGACCACTACCTTCCAATC
CCCGTGCGCAGCTACAGAGACGACCTACTTCTGCTCGTCCAGCATCGAGT
TGTCTTTGACACACATTCACTGCTCGTCCTGGAGGTTTTGGTTTGGAACG
GTGAGGCGTTTGAGGCGGGCTTGCCGCCTCCTTGTGGTACTGCCTATGGG
GCGGGCTGCATGTTGGATCAGGATCGTGAGGCTGGCATTTCAGGAGCTGT
CCTGCTCCGCCGCTCGACGAATCAGCCGCCGCTGGTTGTGGTGCCCAGGA
AAGAAGCTCCTACGGGCATTTTTGTGCTGGAAACTCAATTGCTGGCTAGG
AATTCGGAGACACAGGACCTGCTGGAGATCCGACAGTTCATGCAGGATTG
GGTGCACGAACAGGAAGAGCTAATCCAGCTGGCTGAAGAGCTCTTGGCAG
AGAAGTCGGAGAGTCAGTACATCGAGGAGCTATCAACTCCACTGGTTGTA
AGCGAGGGCGGAACCGTTGAGGAACTTTTCGTTAATGAAGCTCGCTGGAC
GGGAGCGGATGCTGTTGTGGATGTAAGCTCCCTGCTTCAGCAGATACTTC
TGTTGGACGGGGAAATGAGTTCTAGGCGATCTAAACGCCAGCCAGAGACG
CTGTTCAACTTTCACTACGAGCAACTGGAAGTAGAAGCCGTTGACTCTGT
GGAACTTAACTTGGAGAAGCTCAACCATGAGACGTTCTATATCCGAAATG
GCTCCCTTGACTTGCATCTGGGAACCCTCAATGTTCAGCAATTGGAACTT
CTGGAAGCTCCGAAATTGGAGCTCGTCCCAGTCCACGGTGCAGAATCATA
CAAAATTCTGAAGATGGCTACGGATTTGGACAGCATTTTTATTAACGAAA
TGGAGTGGGACAAGCTGCTTCAAGATCTGGTGTGGCGTCATCAGCCTCTT
AAGCTTTCGCAGTTACATGTAGAGGGACCGGTCATTTTCGAAGATGTACT
AAGTTTGCACTCTCTGAACGACCTAAGCTTTCCAGGAGACTATCTCTGGT
CGCAGGGAAATGAGACGAGTGTTGTCCAGGCGCCAAAGGAGTTTACGCAA
ACGCTTTCTGCAAATGCTGTGGACACGACGGGAACCATCAACGCCGTATA
CCCGCATGATGTCATTACTCTCAGTGATTCCCAGGAATGGCCGGGATTGG
TAACCTTCTCGCATTTGGAGGTTTCTGAAGAATTGGAGCTCAATGGCAGC
GCCCAGGGAAGGCAGTTTGAGGAGGCACCTTTAAATCCCACTCTGCTGGA
GTCACGTGTTATCAGTGCCGACTGCCATTTCGAACAGCTTCTTGTGCGTG
GCCCTTTGCGGCTGCTTGGAAAGGTGGATAACGACAGCTTTGGCTCTCTG
CTAGGAGATCTCGTTCAGCGTTCGCCGAACTCTGCCCAAGAACTACAGAT
AAGTGGACAAAAGCGAGTTGACCAGCTGCTTCTGCCAGTGGATGCTCATA
TCGCAGATAATCAGCTCAGTGGAATTTTCCTCAATGACTTTGTTACCAAG
CACACGCCACAAACGCTGTCGAATCTGAGTCAACTGGGAGGGTATGTTTA
CTTTCATCAGCTGGAGCTTGGGAAAGAGTCCTCTTACGACGGAGTTCGCC
TAGAGGAACTACTCTCCAAAAGTCTTCGACTAGATAGCCCATTTCCCCTG
AGTTCTCCCCACACACGCCTTCGGTTTGTTGGACATGCCCCAAATTTCAC
CCGGCTACAAGTTGAAAACACCTTGAACAAGGTGCCGCTGTCAAGTGGCT
ACCAGCTGCTCCATGAACCGCTCCATCTAGGCAGAGCTAACTTTAGTCGT
CTGATGGCAGGGCAAGCGCAGGTTAACTATGATGTCTCTGGCAACGGGCT
ACTCAATGGACGAAGCCTGATCCGTATTCTACAGGAGCAACCTAGGACTT
GGTCGGGTGAAGTGCACGTGCAAGAGCTTATTCTTCCCCAGGGTGTGCAG
GCGAACCAGCTGCAGGGCATTAAGGCAGACCTTCTGCTGGATTTTCTGCA
GCAGCTGGACGAGCTCCCGTTGCTGATCCTTCAGGGTCGCATCCAAGTTG
AACGCATCGCCGTCAACGGTTCGGTGCAAGCAGCTGAAACCTTGAACATG
CAACCCTTCCACGAACTTCAGAGGCAAGTCGTTTGGCTGGATAGGCAGAA
CGAATTAGGGACGCGTTGGGTTCTGAAAGAATCTCCCCAGTTCCAGCAGA
ACCTCCAAGTTCTGGGCAGCTTTAACGAGCGCCTGCTCCCAGAATTGCTG
GATGACATTGTGCTGCGCTCCGACGCGCACGAGGTGCTGATCGAGGGCAC
CAAAAGCTTCTTGGCTCCTGTTAACACTAAAGAGCTTCATCTGGCTGCAC
TGAATGGGATTCCCTTCAATCACATGGCCAACAAATTATCTCCGCTGCAC
CTAACTGGAAATGTCCGCATTCAGGGACGCATCTTTGTGGAGGACCTGCA
GCTAAATGGTCAAGTAAACGGAGATCCGGACATTCCTGCTGATCTGCAGA
AACTGCTCCGCTGGGATCCAAATGCAGGTGGCTTTGTGCACCGGGGAGTC
GTTGAACTTCCAAAAAAGGAGCTAGAACGCCTAGTGGTTTTGGGCCACTT
GAAAAATCGCAGCCGTGAGCCCGTTCAGGAACTCTTTGATCAGCTAGTCT
TCAAGCAGCAGCGTGGCATACACTTGCATGGTCACAAGACTTTCACAGGC
CGTCTTCGCATTGAAGATGGAGCTCACATCAAGTTCTTCAATGGACGCAA
CCTAGAACAGTTCCTAGAGAATTTAATCTACGTGGATTCGCAGGGAGAGA
TACGTTTGGAAACACCTGTTCGCTTTGCGGCTGATGTTAAAATGGATCAT
CTTGAAGCAGATCGCCTTGTACTGTCGGGAGAGCTGCTTAACGGATGCAA
TGTGAGCCAGTGGCTCCGGGACACTATTCGTGTCGATCGCGATTTCCAAC
AGCCTGAGATTGCGTTTGCAAAGGGATCGCTGGATGGTAATTTCTTGGAG
GTTGAGGAGCTTAACGAAGTTAATCTCTCACTGGTTGTCACCCGCTTCAC
GGAGCAACAGCTAAGCGATCCCCTAGAGGCAGATGATTTGCTCCTAGATG
GCCAGCTGGTGGTAAGGGGCACTGTTAATGGTTACAATCTACCAGAGGAG
TATGCCAACACTTTAATGATTAACCCATTGCGAGAGCAGCAAGTGGATAC
GCCTTTATTGTTGTCTAACATTTTTGTCACCGGACCCCTGGAGGTAACTG
CTCCAGTTCATGGTCTAAACATAAGCGATGTGGCAATTTTGGGCGAAGAT
CCAGTGCTGCTGCAATCGCCGCTATATTTCGACACTCTGCATGCTCCGTT
TTTGAGAGCGCAACAGAACATCAATGGATTTGACTTTAGGGCTTGGTACG
GAGGAAGCTTATGGGCAAGAGGTCGGGAGCAGCAGGAAATAAGCGGGAAC
TGGCGCGTAAAGAAACTGCAGGTGAAGCAGGGTGATGAGCTGCGACCACG
TCGACAAACTGCAGAAGAGAGCTACCGGGAGTTCTGCGAGGGTTTGGTCA
GGATTCTCCTGCCTTACAAGGTCCAGAAGCTGCGGCGGAGATTTGATTTA
AATCAGGAAAGGGATCAGGAGAATATTCGCCGAGTATTTGCTTTGGAGGC
ACCCGGGGGCATTAGTTATCTTCTGATCAACGAGCGAGGTTGCTGGACCC
GCATCCACCGCTGGAATGGATCTTTATTCGATCGATCCGGAGCCTTCAAG
AGCGGACCTGTGGACGAGGCAGTTGCTTTACGGGTGGGAAACACAAGCTC
TAACCAGGACTTTGCCTTTATGACCAGCTACGAGTTGCAGGATGATCAGA
ACGAGCCAAGCTTGAATTGCAGTGCAGTGAAGCCCATTCTGCTGAGCTGG
AACCTGAACAAAACAAAGAGCACTACTGAGCACATGGAACTATCAGCGGA
CACCCTAAGAAATCTCAAAGATCAATATGAGCAGCTTAAAAACCAGCCAC
TCCCTAATCCCAGTTACCAGCAAGCTTTTAAGTATCTGCAGCGTCCCAGC
ATCAAGTCTCAGCTCGGATCACAGTGGCAAGAGAATAAACATGAACTGAG
TCCTTCGGAGATGGCCAGAATGCGGAGACGTCTGCTGGACACCTTGGAAT
TCCGGTTGCAAGCGGAGGTAAACATTACCCAGTTAAGTATTCCAGAAAGC
GACCTATTCGACGAGCACCTTGTGGAGGATTTTCTGGAGTTGATGCGCCA
ATTGCGAACCTTGCGCCGGCGTCTAGATACAGAGACTCTTCCACTGCCAA
ACACGCCGGCAAGAGTTCTGGCCGCACGGAGTGCCCAGCTCATCTGGCCC
ACGTTGCAGGAGTTGCGAGAGGTTTCGAGTGGAAACGATTCTAGCTTCCA
GGAGCAAGTTCTGGAGCAAACGCTGCTGGATGTGCTGATGCTGGCTAATG
AAGAAAATGGCTCGGGGGATGATGAAAAGCTGCATGCGGTGATTCAGAGA
TTGAGAAACCTTAAAGGAGAGCTTCAAGGGCAAGAGGAAGACGACGAGGG
ACCTGCTGCCTCCTATTCGGACAGAAATGAGCAGCGTTTGCCGCTACCAG
AAGTCGACTGGAGACCCATTCAAACACTTCGCCTCGCTGTGGGACCAGCA
AACCGTCCCCGACTTCTTTACGCCCGGCTGACCGTGGTGACACCAACAGA
CGGTCCTCCGCCCACCACGCCCTCCACTGCGCCAGCCGCCCACATCCAAC
TGCATCATGCAAATGGATCGCTCTTTCAAACGCTAGCAGGGGAGCATGGA
GCACGCCATCTGACATCGTTGCGGGTACGAGATGAGACGCTGCTAGCATT
TATGGAGGGATGCTGCCGTATAAGAGTGCTTATCTACCGCGGTGTGCAGG
GATTCGTGGACTTTGTCCGTTTCCCCGCACCTGCCCAAGAAGCTAAGAGC
GGAGATGGGGAGGTCTTGCAGTTACTATCCCTACGCTTACCTCTCAATCG
GCCACCCGGAGCCATGTACTTATTGGCAGTGGTTCAAGCTCGACGCGTCA
CTTTCTACGAAGTGGTGGTAGCCGGATTACTAGAGCCGTGGCTCCAGTGC
CCATGATTGTTAAATTAAAATGTATATGTAAACTTGTTTAGATGGATGAT
AGTGAGTTGCTTATAAGATGTAGTTAGTTATCTTTAGTGTGCTGTTTGTT
AACTGTGTAATATTATTGTAATTATTCTTCTTGTTGTGAATAAACATTGG
TTTGGTGATGTTTAAAAAGAAAAAAAAAAAAAAAA

RE10379.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
fs(1)N-RA 6625 fs(1)N-RA 35..6603 1..6569 32815 99.9 Plus
fs(1)N.a 6607 fs(1)N.a 14..6585 1..6569 32760 99.9 Plus
fs(1)N.c 6614 fs(1)N.c 214..6592 191..6569 31865 99.9 Plus
fs(1)N.c 6614 fs(1)N.c 14..205 1..192 960 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1221280..1223381 4468..6569 10495 100 Plus
chrX 22417052 chrX 1216716..1218752 191..2227 10170 100 Plus
chrX 22417052 chrX 1219185..1220957 2487..4259 8835 99.9 Plus
chrX 22417052 chrX 1221012..1221220 4260..4468 1045 100 Plus
chrX 22417052 chrX 1216468..1216657 1..190 950 100 Plus
chrX 22417052 chrX 1218998..1219128 2358..2488 655 100 Plus
chrX 22417052 chrX 1218811..1218940 2228..2357 650 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:32:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:36:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1327337..1329438 4468..6569 10510 100 Plus
X 23542271 X 1322773..1324809 191..2227 10170 100 Plus
X 23542271 X 1325242..1327014 2487..4259 8850 99.9 Plus
X 23542271 X 1327069..1327277 4260..4468 1045 100 Plus
X 23542271 X 1322525..1322714 1..190 950 100 Plus
X 23542271 X 1325055..1325185 2358..2488 655 100 Plus
X 23542271 X 1324868..1324997 2228..2357 650 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:13:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1335435..1337536 4468..6569 10510 100 Plus
X 23527363 X 1330871..1332907 191..2227 10170 99.9 Plus
X 23527363 X 1333340..1335112 2487..4259 8850 99.9 Plus
X 23527363 X 1335167..1335375 4260..4468 1045 100 Plus
X 23527363 X 1330623..1330812 1..190 950 100 Plus
X 23527363 X 1333153..1333283 2358..2488 655 100 Plus
X 23527363 X 1332966..1333095 2228..2357 650 100 Plus
Blast to na_te.dros performed 2019-03-15 22:36:34
Subject Length Description Subject Range Query Range Score Percent Strand
invader2 5124 invader2 INVADER2 5124bp 790..828 2141..2180 125 82.5 Plus

RE10379.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:37:38 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1216468..1216657 1..190 100 -> Plus
chrX 1216716..1218752 191..2227 99 -> Plus
chrX 1218811..1218940 2228..2357 100 -> Plus
chrX 1218998..1219128 2358..2488 100 -> Plus
chrX 1219187..1220957 2489..4259 99 -> Plus
chrX 1221012..1221220 4260..4468 100 -> Plus
chrX 1221281..1223381 4469..6569 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:53:10 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6357 50..6406 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:51:52 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6357 50..6406 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:27:00 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6357 50..6406 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:34:11 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6357 50..6406 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:29:56 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6357 50..6406 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:03:22 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6569 1..6569 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:51:52 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6569 1..6569 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:27:00 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 13..6581 1..6569 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:34:11 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 1..6569 1..6569 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:29:56 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
fs(1)N-RA 13..6581 1..6569 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:38 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
X 1322525..1322714 1..190 100 -> Plus
X 1322773..1324809 191..2227 99 -> Plus
X 1324868..1324997 2228..2357 100 -> Plus
X 1325055..1325185 2358..2488 100 -> Plus
X 1325244..1327014 2489..4259 99 -> Plus
X 1327069..1327277 4260..4468 100 -> Plus
X 1327338..1329438 4469..6569 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:38 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
X 1322525..1322714 1..190 100 -> Plus
X 1322773..1324809 191..2227 99 -> Plus
X 1324868..1324997 2228..2357 100 -> Plus
X 1325055..1325185 2358..2488 100 -> Plus
X 1325244..1327014 2489..4259 99 -> Plus
X 1327069..1327277 4260..4468 100 -> Plus
X 1327338..1329438 4469..6569 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:38 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
X 1322525..1322714 1..190 100 -> Plus
X 1322773..1324809 191..2227 99 -> Plus
X 1324868..1324997 2228..2357 100 -> Plus
X 1325055..1325185 2358..2488 100 -> Plus
X 1325244..1327014 2489..4259 99 -> Plus
X 1327069..1327277 4260..4468 100 -> Plus
X 1327338..1329438 4469..6569 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:27:00 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1216558..1216747 1..190 100 -> Plus
arm_X 1216806..1218842 191..2227 99 -> Plus
arm_X 1218901..1219030 2228..2357 100 -> Plus
arm_X 1219088..1219218 2358..2488 100 -> Plus
arm_X 1219277..1221047 2489..4259 99 -> Plus
arm_X 1221102..1221310 4260..4468 100 -> Plus
arm_X 1221371..1223471 4469..6569 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:15:34 Download gff for RE10379.complete
Subject Subject Range Query Range Percent Splice Strand
X 1330871..1332907 191..2227 99 -> Plus
X 1332966..1333095 2228..2357 100 -> Plus
X 1333153..1333283 2358..2488 100 -> Plus
X 1333342..1335112 2489..4259 99 -> Plus
X 1335167..1335375 4260..4468 100 -> Plus
X 1335436..1337536 4469..6569 100   Plus
X 1330623..1330812 1..190 100 -> Plus

RE10379.hyp Sequence

Translation from 0 to 6405

> RE10379.hyp
HICLTCLVFCQLTVCKMLIWHLLLWPALIASAPPRPLTDQKAEVAKLRSE
LEKALEHDDGGAPPGVVVAPTWTQQAGQMPLGKTSKVVVDHSSLSSASAI
RQEIQQAVAHQGQNQEVLQLEALLKARGSSKESTAQVSTSRQEVLGATVQ
EANVVESHSTSQTVDLEQLQRLELSKRRTRDMLVLGRIEELLNYSMPTDV
DRWLTLQANGSVFLVGQQQEGLLVLSEEFTPLQSYVHPFPITAMLGTDRW
NRRVHMQEGLLVMASQDQLIWLRLEPSLGLKPIWHWTIGSHVTKIRAFNM
EGQDYLALVANHTLNIYVYDLEAEEFWIAQRVQMAETISNLAILDTGREL
LLAVGQWDEVLIYACTSKGQPLHLRQQVAAPEVAGVTAFQMGGRSYLALG
GIMPQILVYVQGQLVPRTILGQNFGFVDHYLPIPVRSYRDDLLLLVQHRV
VFDTHSLLVLEVLVWNGEAFEAGLPPPCGTAYGAGCMLDQDREAGISGAV
LLRRSTNQPPLVVVPRKEAPTGIFVLETQLLARNSETQDLLEIRQFMQDW
VHEQEELIQLAEELLAEKSESQYIEELSTPLVVSEGGTVEELFVNEARWT
GADAVVDVSSLLQQILLLDGEMSSRRSKRQPETLFNFHYEQLEVEAVDSV
ELNLEKLNHETFYIRNGSLDLHLGTLNVQQLELLEAPKLELVPVHGAESY
KILKMATDLDSIFINEMEWDKLLQDLVWRHQPLKLSQLHVEGPVIFEDVL
SLHSLNDLSFPGDYLWSQGNETSVVQAPKEFTQTLSANAVDTTGTINAVY
PHDVITLSDSQEWPGLVTFSHLEVSEELELNGSAQGRQFEEAPLNPTLLE
SRVISADCHFEQLLVRGPLRLLGKVDNDSFGSLLGDLVQRSPNSAQELQI
SGQKRVDQLLLPVDAHIADNQLSGIFLNDFVTKHTPQTLSNLSQLGGYVY
FHQLELGKESSYDGVRLEELLSKSLRLDSPFPLSSPHTRLRFVGHAPNFT
RLQVENTLNKVPLSSGYQLLHEPLHLGRANFSRLMAGQAQVNYDVSGNGL
LNGRSLIRILQEQPRTWSGEVHVQELILPQGVQANQLQGIKADLLLDFLQ
QLDELPLLILQGRIQVERIAVNGSVQAAETLNMQPFHELQRQVVWLDRQN
ELGTRWVLKESPQFQQNLQVLGSFNERLLPELLDDIVLRSDAHEVLIEGT
KSFLAPVNTKELHLAALNGIPFNHMANKLSPLHLTGNVRIQGRIFVEDLQ
LNGQVNGDPDIPADLQKLLRWDPNAGGFVHRGVVELPKKELERLVVLGHL
KNRSREPVQELFDQLVFKQQRGIHLHGHKTFTGRLRIEDGAHIKFFNGRN
LEQFLENLIYVDSQGEIRLETPVRFAADVKMDHLEADRLVLSGELLNGCN
VSQWLRDTIRVDRDFQQPEIAFAKGSLDGNFLEVEELNEVNLSLVVTRFT
EQQLSDPLEADDLLLDGQLVVRGTVNGYNLPEEYANTLMINPLREQQVDT
PLLLSNIFVTGPLEVTAPVHGLNISDVAILGEDPVLLQSPLYFDTLHAPF
LRAQQNINGFDFRAWYGGSLWARGREQQEISGNWRVKKLQVKQGDELRPR
RQTAEESYREFCEGLVRILLPYKVQKLRRRFDLNQERDQENIRRVFALEA
PGGISYLLINERGCWTRIHRWNGSLFDRSGAFKSGPVDEAVALRVGNTSS
NQDFAFMTSYELQDDQNEPSLNCSAVKPILLSWNLNKTKSTTEHMELSAD
TLRNLKDQYEQLKNQPLPNPSYQQAFKYLQRPSIKSQLGSQWQENKHELS
PSEMARMRRRLLDTLEFRLQAEVNITQLSIPESDLFDEHLVEDFLELMRQ
LRTLRRRLDTETLPLPNTPARVLAARSAQLIWPTLQELREVSSGNDSSFQ
EQVLEQTLLDVLMLANEENGSGDDEKLHAVIQRLRNLKGELQGQEEDDEG
PAASYSDRNEQRLPLPEVDWRPIQTLRLAVGPANRPRLLYARLTVVTPTD
GPPPTTPSTAPAAHIQLHHANGSLFQTLAGEHGARHLTSLRVRDETLLAF
MEGCCRIRVLIYRGVQGFVDFVRFPAPAQEAKSGDGEVLQLLSLRLPLNR
PPGAMYLLAVVQARRVTFYEVVVAGLLEPWLQCP*

RE10379.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:43
Subject Length Description Subject Range Query Range Score Percent Strand
fs(1)N-PA 2118 CG11411-PA 1..2118 17..2134 10879 100 Plus

RE10379.pep Sequence

Translation from 49 to 6405

> RE10379.pep
MLIWHLLLWPALIASAPPRPLTDQKAEVAKLRSELEKALEHDDGGAPPGV
VVAPTWTQQAGQMPLGKTSKVVVDHSSLSSASAIRQEIQQAVAHQGQNQE
VLQLEALLKARGSSKESTAQVSTSRQEVLGATVQEANVVESHSTSQTVDL
EQLQRLELSKRRTRDMLVLGRIEELLNYSMPTDVDRWLTLQANGSVFLVG
QQQEGLLVLSEEFTPLQSYVHPFPITAMLGTDRWNRRVHMQEGLLVMASQ
DQLIWLRLEPSLGLKPIWHWTIGSHVTKIRAFNMEGQDYLALVANHTLNI
YVYDLEAEEFWIAQRVQMAETISNLAILDTGRELLLAVGQWDEVLIYACT
SKGQPLHLRQQVAAPEVAGVTAFQMGGRSYLALGGIMPQILVYVQGQLVP
RTILGQNFGFVDHYLPIPVRSYRDDLLLLVQHRVVFDTHSLLVLEVLVWN
GEAFEAGLPPPCGTAYGAGCMLDQDREAGISGAVLLRRSTNQPPLVVVPR
KEAPTGIFVLETQLLARNSETQDLLEIRQFMQDWVHEQEELIQLAEELLA
EKSESQYIEELSTPLVVSEGGTVEELFVNEARWTGADAVVDVSSLLQQIL
LLDGEMSSRRSKRQPETLFNFHYEQLEVEAVDSVELNLEKLNHETFYIRN
GSLDLHLGTLNVQQLELLEAPKLELVPVHGAESYKILKMATDLDSIFINE
MEWDKLLQDLVWRHQPLKLSQLHVEGPVIFEDVLSLHSLNDLSFPGDYLW
SQGNETSVVQAPKEFTQTLSANAVDTTGTINAVYPHDVITLSDSQEWPGL
VTFSHLEVSEELELNGSAQGRQFEEAPLNPTLLESRVISADCHFEQLLVR
GPLRLLGKVDNDSFGSLLGDLVQRSPNSAQELQISGQKRVDQLLLPVDAH
IADNQLSGIFLNDFVTKHTPQTLSNLSQLGGYVYFHQLELGKESSYDGVR
LEELLSKSLRLDSPFPLSSPHTRLRFVGHAPNFTRLQVENTLNKVPLSSG
YQLLHEPLHLGRANFSRLMAGQAQVNYDVSGNGLLNGRSLIRILQEQPRT
WSGEVHVQELILPQGVQANQLQGIKADLLLDFLQQLDELPLLILQGRIQV
ERIAVNGSVQAAETLNMQPFHELQRQVVWLDRQNELGTRWVLKESPQFQQ
NLQVLGSFNERLLPELLDDIVLRSDAHEVLIEGTKSFLAPVNTKELHLAA
LNGIPFNHMANKLSPLHLTGNVRIQGRIFVEDLQLNGQVNGDPDIPADLQ
KLLRWDPNAGGFVHRGVVELPKKELERLVVLGHLKNRSREPVQELFDQLV
FKQQRGIHLHGHKTFTGRLRIEDGAHIKFFNGRNLEQFLENLIYVDSQGE
IRLETPVRFAADVKMDHLEADRLVLSGELLNGCNVSQWLRDTIRVDRDFQ
QPEIAFAKGSLDGNFLEVEELNEVNLSLVVTRFTEQQLSDPLEADDLLLD
GQLVVRGTVNGYNLPEEYANTLMINPLREQQVDTPLLLSNIFVTGPLEVT
APVHGLNISDVAILGEDPVLLQSPLYFDTLHAPFLRAQQNINGFDFRAWY
GGSLWARGREQQEISGNWRVKKLQVKQGDELRPRRQTAEESYREFCEGLV
RILLPYKVQKLRRRFDLNQERDQENIRRVFALEAPGGISYLLINERGCWT
RIHRWNGSLFDRSGAFKSGPVDEAVALRVGNTSSNQDFAFMTSYELQDDQ
NEPSLNCSAVKPILLSWNLNKTKSTTEHMELSADTLRNLKDQYEQLKNQP
LPNPSYQQAFKYLQRPSIKSQLGSQWQENKHELSPSEMARMRRRLLDTLE
FRLQAEVNITQLSIPESDLFDEHLVEDFLELMRQLRTLRRRLDTETLPLP
NTPARVLAARSAQLIWPTLQELREVSSGNDSSFQEQVLEQTLLDVLMLAN
EENGSGDDEKLHAVIQRLRNLKGELQGQEEDDEGPAASYSDRNEQRLPLP
EVDWRPIQTLRLAVGPANRPRLLYARLTVVTPTDGPPPTTPSTAPAAHIQ
LHHANGSLFQTLAGEHGARHLTSLRVRDETLLAFMEGCCRIRVLIYRGVQ
GFVDFVRFPAPAQEAKSGDGEVLQLLSLRLPLNRPPGAMYLLAVVQARRV
TFYEVVVAGLLEPWLQCP*

RE10379.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22001-PA 2113 GF22001-PA 21..2113 20..2117 6416 62.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12842-PA 2114 GG12842-PA 1..2113 1..2117 9557 88.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12875-PA 2180 GH12875-PA 18..2179 14..2117 5211 52.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
fs(1)N-PA 2118 CG11411-PA 1..2118 1..2118 10879 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14976-PA 2180 GI14976-PA 32..2179 24..2117 5286 51.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26766-PA 2132 GL26766-PA 10..2131 6..2117 6146 59.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23047-PA 2156 GA23047-PA 10..2155 6..2117 6269 59.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19125-PA 435 GM19125-PA 1..435 1..436 2137 93.6 Plus
Dsec\GM19126-PA 667 GM19126-PA 1..279 449..726 1325 95 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16550-PA 1285 GD16550-PA 1..1282 1..1280 6213 94.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18936-PA 2181 GJ18936-PA 19..2181 14..2117 5319 52.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16233-PA 1568 GK16233-PA 28..1565 20..1569 3341 46.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16677-PA 2119 GE16677-PA 1..2118 1..2117 9557 88.4 Plus