Clone RE10485 Report

Search the DGRC for RE10485

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:104
Well:85
Vector:pFlc-1
Associated Gene/TranscriptSerT-RA
Protein status:RE10485.pep: gold
Preliminary Size:2471
Sequenced Size:3195

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4545 2001-12-16 Blastp of sequenced clone
CG4545 2002-01-01 Sim4 clustering to Release 2
CG4545 2003-01-01 Sim4 clustering to Release 3
SerT 2008-04-29 Release 5.5 accounting
SerT 2008-08-15 Release 5.9 accounting
SerT 2008-12-18 5.12 accounting

Clone Sequence Records

RE10485.complete Sequence

3195 bp (3195 high quality bases) assembled on 2001-12-16

GenBank Submission: AY071023

> RE10485.complete
AGTAGGCCCAAAGGAGCGGCGCGCGTCTCTCAAGTCGGACGCATGGAAGC
CAGAAGCACCAGAAACCACCAGTGCAGTGCCTTGGAAGTTGTTCAAAGTG
CTTAATTCAAAGTGAAATAATTAAAATCATCTCAATCAAGGAAAATATCT
TTTTAATTGCCAGTCGATTCAGCGAGGCCAGCATGTGAGGAGCCGTGGGA
AAATGCAATTTCCACGACCACAGCGCTAAACGGGCCGGAAAAGCGGGAAG
TCGGAAAAGATAGGGACAGCAGGTGGGCGAGGAGCAGTGAAGAGCAGGGA
AAAGCCGCAAGTAGAGCGCAGATTTCGCTTTTTCTGGCCCCGGACTGAGT
GCAGATCCAGAGTTCGGCTGGCTAAGCTCGTGCCGCGATCGGCGTACACT
GCCACGCCTCCAGGCACCGCGCCCCCGCCCCTGTCACGCCCCACGCACCA
CAAGATGGACCGCAGCGGGAGCTCCGATTTCGCAGGAGCAGCTGCCACGA
CGGGCCGCTCGAATCCCGCGCCCTGGAGCGACGACAAAGAGTCGCCAAAC
AACGAGGACGACTCCAACGAGGACGATGGCGACCACACGACGCCCGCCAA
GGTCACCGATCCACTGGCCCCCAAGCTGGCCAACAACGAGCGCATTCTGG
TGGTCTCCGTGACGGAGAGGACTCGCGAGACCTGGGGACAGAAGGCGGAG
TTCCTCCTGGCCGTGATTGGGTTCGCAGTGGATCTGGGCAATGTGTGGCG
CTTCCCGTACATCTGCTATCAGAACGGAGGCGGCGCCTTCCTGGTGCCCT
ACTGCCTCTTCCTCATCTTCGGTGGACTGCCCCTGTTCTACATGGAGCTG
GCGCTGGGCCAGTTCCACCGATGTGGTTGCCTCAGCATCTGGAAGCGCAT
CTGTCCGGCCCTAAAAGGCGTGGGCTATGCGATCTGCCTAATCGACATTT
ATATGGGCATGTACTACAACACGATTATCGGCTGGGCGGTATACTACCTC
TTCGCCTCGTTCACATCCAAGTTGCCGTGGACGTCGTGCGATAATCCCTG
GAACACTGAGAACTGCATGCAGGTGACCAGTGAGAACTTCACGGAACTGG
CCACGTCGCCGGCCAAGGAGTTCTTTGAGCGAAAGGTTTTGGAGAGCTAC
AAGGGCAACGGGCTGGACTTCATGGGTCCGGTGAAGCCCACGCTGGCACT
CTGCGTCTTCGGGGTCTTTGTCCTGGTCTACTTCTCCCTGTGGAAGGGAG
TGCGCAGTGCCGGAAAGGTGGTGTGGGTCACCGCTCTGGCTCCTTATGTG
GTGCTAATCATCCTGCTGGTTAGAGGAGTTTCCCTGCCCGGCGCGGACGA
GGGCATCAAGTACTACCTAACCCCGGAGTGGCACAAACTGAAGAACTCCA
AAGTCTGGATCGACGCCGCATCCCAGATTTTCTTCTCCCTTGGCCCCGGA
TTCGGAACCCTGCTGGCCCTGTCCAGCTACAACAAGTTCAACAACAACTG
CTATCGCGATGCTCTCATCACCAGCAGCATCAACTGCTTGACCAGTTTCC
TGGCCGGCTTTGTCATCTTCTCCGTTTTGGGGTACATGGCCTACGTCCAA
AAGACCTCCATCGACAAGGTGGGCCTGGAGGGTCCGGGGCTGGTGTTCAT
CGTTTACCCGGAGGCCATAGCCACGATGAGTGGCTCGGTGTTCTGGAGCA
TCATCTTCTTCCTGATGCTGATTACCCTGGGACTGGACAGCACCTTTGGC
GGATTGGAGGCGATGATAACAGCGCTGTGCGACGAGTATCCGCGAGTGAT
TGGCAGGCGCAGGGAGCTGTTCGTCCTGCTGCTCCTGGCTTTCATCTTCC
TGTGCGCCCTTCCCACGATGACCTACGGTGGCGTGGTGCTGGTCAACTTC
CTGAATGTCTACGGACCCGGGTTGGCCATCCTCTTTGTGGTCTTCGTGGA
GGCAGCCGGAGTCTTTTGGTTCTACGGAGTGGACCGCTTCAGCTCGGATG
TGGAACAGATGCTGGGCAGCAAGCCAGGCTTATTCTGGCGGATCTGCTGG
ACGTACATCAGCCCTGTGTTCCTGCTGACCATATTCATTTTCTCCATCAT
GGGCTACAAGGAGATGCTCGGCGAGGAGTACTACTACCCGGACTGGAGCT
ACCAGGTGGGCTGGGCGGTCACCTGCTCGTCGGTGCTCTGCATCCCCATG
TACATTATCTACAAGTTCTTCTTCGCCTCGAAAGGCGGCTGCCGCCAGAG
GCTGCAGGAGTCCTTCCAGCCGGAGGACAACTGCGGATCGGTGGTGCCCG
GCCAACAGGGCACCTCGGTGTGACATGACCACGCCCAGGTTCACGTCAAC
ATCCGCACCAGCTGCACGAGCATCAAGATCTACAACCTCAACTGCAGCAG
CAACAGCAACAGCTTGTCACCAACAACCTCAGGGGCCGAGGGAAGGAGCT
GCTACTCAACTAATCTCAACTGCAACCATTCCTGCCCGTCGGAAGATCAG
TATCGGAGCCGGAACCACCAACAGCAACAGCAACAGCATCATCATCATCA
TCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTC
TTAGGCAGTCGCACAGCCATAGTTTAAGCCTCTGCTCGGTGCAGAGCAAT
CCCATGGCGACCACCAGGATCCCACTTGCTGCCGAGGACAATAACTGCTC
GCTGCGACTCAGCAGCTGCCAGCCGCTTAAGTTCCCGCTGGCCAGCGAGT
GGCTGGTCTAAGTGAGCCTCCAGTCTACACCGGAGTCCTGCAAATCAGCC
ATTTTGCAGGACTCCCGTGCATAGTGCTACAATTCGGAAAGGAGGTGCCA
GGAACTCAATGTTTGATCTAGTTTCTGATTGCTTTGCAAGCACATAGTGA
ACCTAAGTATTCTAGTTGTTGGGTCATCGATGGTGTTAGCAATGGAACCC
TTAGCCTTAGTTCGTAAGCGTTAACTAGCTCAGCTGTAAGTCAAGTGAAA
TTTGGTAAAATGCTTTCTAAGTAATAACTGCTCTAAGATAGAGAACGCCC
TGTACAATGCATTACTCAACCGTTTTTGTGCTCGGGGAAAGGCAATCGTA
AGTCAGCCATTTACGTTGCCTCTCCAGCGAGTTTAGTTTGTTTTAAAATA
TAATTTCGGTTTTACGAAATACAAAAACACAAAAAAAAAAAAAAA

RE10485.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
SerT.c 3679 SerT.c 500..3679 1..3180 15885 99.9 Plus
SerT.b 3476 SerT.b 297..3476 1..3180 15885 99.9 Plus
SerT.a 3201 SerT.a 174..3201 153..3180 15140 100 Plus
SerT.a 3201 SerT.a 4..159 1..156 750 98.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20290519..20291622 3180..2077 5445 99.5 Minus
chr2R 21145070 chr2R 20295311..20295798 640..153 2440 100 Minus
chr2R 21145070 chr2R 20292855..20293309 1583..1129 2260 99.8 Minus
chr2R 21145070 chr2R 20292448..20292744 1877..1581 1455 99.3 Minus
chr2R 21145070 chr2R 20294886..20295165 918..639 1400 100 Minus
chr2R 21145070 chr2R 20293365..20293578 1129..916 1070 100 Minus
chr2R 21145070 chr2R 20291681..20291881 2077..1877 990 99.5 Minus
chr2R 21145070 chr2R 20296316..20296471 156..1 735 98.1 Minus
chr2L 23010047 chr2L 4468387..4468496 1497..1388 190 78.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:32:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:36:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24404593..24405698 3182..2077 5530 100 Minus
2R 25286936 2R 24409387..24409874 640..153 2440 100 Minus
2R 25286936 2R 24406931..24407385 1583..1129 2275 100 Minus
2R 25286936 2R 24406524..24406820 1877..1581 1485 100 Minus
2R 25286936 2R 24408962..24409241 918..639 1400 100 Minus
2R 25286936 2R 24407441..24407654 1129..916 1070 100 Minus
2R 25286936 2R 24405757..24405957 2077..1877 1005 100 Minus
2R 25286936 2R 24410392..24410547 156..1 750 98.7 Minus
2L 23513712 2L 4469256..4469365 1497..1388 190 78.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 24405792..24406897 3182..2077 5530 100 Minus
2R 25260384 2R 24410586..24411073 640..153 2440 100 Minus
2R 25260384 2R 24408130..24408584 1583..1129 2275 100 Minus
2R 25260384 2R 24407723..24408019 1877..1581 1485 100 Minus
2R 25260384 2R 24410161..24410440 918..639 1400 100 Minus
2R 25260384 2R 24408640..24408853 1129..916 1070 100 Minus
2R 25260384 2R 24406956..24407156 2077..1877 1005 100 Minus
2R 25260384 2R 24411591..24411746 156..1 750 98.7 Minus
Blast to na_te.dros performed 2019-03-15 22:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6956 2357..2593 293 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2405..2662 2343..2588 280 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6956 2347..2581 262 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2539 2347..2565 258 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2531 2383..2598 258 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6691..6928 2349..2598 240 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2778..2989 2347..2565 238 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..6951 2347..2553 225 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2601..2838 2347..2578 219 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2457..2665 2347..2562 206 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2748..2977 2359..2588 197 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6764..6856 2347..2438 192 68.8 Plus
roo 9092 roo DM_ROO 9092bp 1079..1162 2347..2432 182 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2468 2347..2444 176 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2597..2851 2355..2613 159 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6785..6908 2347..2476 159 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..7087 2348..2595 154 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6857..7089 2347..2571 154 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2799..2998 2347..2547 147 54.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6796..7007 2343..2543 142 58.3 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3246..3374 2344..2479 142 58.8 Plus
roo 9092 roo DM_ROO 9092bp 1059..1132 2357..2432 141 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1581 2350..2413 131 67.2 Plus

RE10485.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:37:39 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20290519..20291119 2580..3180 99 == Minus
chr2R 20291178..20291621 2078..2521 99 <- Minus
chr2R 20291681..20291881 1877..2077 99 <- Minus
chr2R 20292449..20292743 1582..1876 99 <- Minus
chr2R 20292857..20293309 1129..1581 99 <- Minus
chr2R 20293366..20293576 918..1128 100 <- Minus
chr2R 20294887..20295163 641..917 100 <- Minus
chr2R 20295311..20295798 153..640 100 <- Minus
chr2R 20296320..20296471 1..152 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:53:13 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..1869 455..2323 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:00:59 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..1869 455..2323 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:27:03 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..1869 455..2323 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:25:38 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..1869 455..2323 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:29:59 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..1869 455..2323 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:27:12 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..3180 1..3180 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:00:59 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..3180 1..3180 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:27:03 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 4..3183 1..3180 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:25:38 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 1..3180 1..3180 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:29:59 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
SerT-RA 4..3183 1..3180 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:39 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24410396..24410547 1..152 99   Minus
2R 24404595..24405697 2078..3180 100 <- Minus
2R 24405757..24405957 1877..2077 100 <- Minus
2R 24406525..24406819 1582..1876 100 <- Minus
2R 24406933..24407385 1129..1581 100 <- Minus
2R 24407442..24407652 918..1128 100 <- Minus
2R 24408963..24409239 641..917 100 <- Minus
2R 24409387..24409874 153..640 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:39 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24410396..24410547 1..152 99   Minus
2R 24404595..24405697 2078..3180 100 <- Minus
2R 24405757..24405957 1877..2077 100 <- Minus
2R 24406525..24406819 1582..1876 100 <- Minus
2R 24406933..24407385 1129..1581 100 <- Minus
2R 24407442..24407652 918..1128 100 <- Minus
2R 24408963..24409239 641..917 100 <- Minus
2R 24409387..24409874 153..640 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:39 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24410396..24410547 1..152 99   Minus
2R 24404595..24405697 2078..3180 100 <- Minus
2R 24405757..24405957 1877..2077 100 <- Minus
2R 24406525..24406819 1582..1876 100 <- Minus
2R 24406933..24407385 1129..1581 100 <- Minus
2R 24407442..24407652 918..1128 100 <- Minus
2R 24408963..24409239 641..917 100 <- Minus
2R 24409387..24409874 153..640 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:27:03 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20297919..20298070 1..152 99   Minus
arm_2R 20292118..20293220 2078..3180 100 <- Minus
arm_2R 20293280..20293480 1877..2077 100 <- Minus
arm_2R 20294048..20294342 1582..1876 100 <- Minus
arm_2R 20294456..20294908 1129..1581 100 <- Minus
arm_2R 20294965..20295175 918..1128 100 <- Minus
arm_2R 20296486..20296762 641..917 100 <- Minus
arm_2R 20296910..20297397 153..640 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:01:07 Download gff for RE10485.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24405812..24406914 2078..3180 100 <- Minus
2R 24406974..24407174 1877..2077 100 <- Minus
2R 24407742..24408036 1582..1876 100 <- Minus
2R 24408150..24408602 1129..1581 100 <- Minus
2R 24408659..24408869 918..1128 100 <- Minus
2R 24410180..24410456 641..917 100 <- Minus
2R 24410604..24411091 153..640 100 <- Minus
2R 24411613..24411764 1..152 99   Minus

RE10485.pep Sequence

Translation from 454 to 2322

> RE10485.pep
MDRSGSSDFAGAAATTGRSNPAPWSDDKESPNNEDDSNEDDGDHTTPAKV
TDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRF
PYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRIC
PALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWN
TENCMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALC
VFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEG
IKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCY
RDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIV
YPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIG
RRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEA
AGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMG
YKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRL
QESFQPEDNCGSVVPGQQGTSV*

RE10485.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11257-PA 752 GF11257-PA 1..626 1..622 3152 94.9 Plus
Dana\GF11259-PA 594 GF11259-PA 25..559 74..606 1472 52 Plus
Dana\GF12191-PA 636 GF12191-PA 6..592 37..586 1234 41.7 Plus
Dana\GF23979-PA 949 GF23979-PA 333..893 74..618 1179 39.4 Plus
Dana\GF12508-PA 1163 GF12508-PA 55..622 74..611 1155 40.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19936-PA 770 GG19936-PA 1..622 1..622 3279 99.2 Plus
Dere\GG22262-PA 631 GG22262-PA 27..589 74..599 1519 51 Plus
Dere\GG16396-PA 636 GG16396-PA 10..592 27..586 1261 42.9 Plus
Dere\GG24369-PA 944 GG24369-PA 339..899 74..618 1179 38.5 Plus
Dere\GG22890-PA 1201 GG22890-PA 55..626 70..611 1159 41.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:16:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20902-PA 627 GH20902-PA 1..627 1..622 3049 92.2 Plus
Dgri\GH20642-PA 627 GH20642-PA 20..594 68..606 1523 50.1 Plus
Dgri\GH17990-PA 557 GH17990-PA 2..524 120..606 1311 48 Plus
Dgri\GH14803-PA 636 GH14803-PA 37..626 36..607 1235 41.1 Plus
Dgri\GH13744-PA 997 GH13744-PA 372..932 74..618 1175 39.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
SerT-PB 622 CG4545-PB 1..622 1..622 3327 100 Plus
SerT-PA 622 CG4545-PA 1..622 1..622 3327 100 Plus
DAT-PB 644 CG8380-PB 27..589 74..599 1551 50.8 Plus
DAT-PA 631 CG8380-PA 27..589 74..599 1551 50.8 Plus
Gat-PA 636 CG1732-PA 29..592 44..586 1316 43.3 Plus
ine-PA 658 CG15444-PA 52..591 74..606 1192 39.5 Plus
ine-PF 943 CG15444-PF 337..876 74..606 1192 39.5 Plus
ine-PE 943 CG15444-PE 337..876 74..606 1192 39.5 Plus
ine-PB 943 CG15444-PB 337..876 74..606 1192 39.5 Plus
ine-PC 943 CG15444-PC 337..876 74..606 1192 39.5 Plus
GlyT-PB 1188 CG5549-PB 53..624 70..611 1185 40.8 Plus
Ntl-PA 590 CG7075-PA 21..535 71..586 1131 40.8 Plus
Gat-PB 508 CG1732-PB 29..478 44..473 1091 45.8 Plus
CG10804-PC 726 CG10804-PC 58..661 17..587 992 36 Plus
Ntl-PB 542 CG7075-PB 13..487 111..586 990 40.1 Plus
CG10804-PD 662 CG10804-PD 34..597 54..587 990 36.8 Plus
CG10804-PB 662 CG10804-PB 34..597 54..587 990 36.8 Plus
CG10804-PA 682 CG10804-PA 34..617 54..587 971 35.7 Plus
CG15279-PD 633 CG15279-PD 16..601 40..615 968 34.8 Plus
CG15279-PA 639 CG15279-PA 16..607 40..615 945 33.8 Plus
CG15279-PB 639 CG15279-PB 16..607 40..615 945 33.8 Plus
NAAT1-PA 641 CG3252-PA 38..600 74..615 922 33.8 Plus
CG43066-PA 675 CG5226-PA 26..619 41..589 922 33.3 Plus
CG43066-PC 721 CG43066-PC 26..619 41..589 922 33.3 Plus
CG8850-PA 616 CG8850-PA 44..582 74..611 921 37.1 Plus
CG8850-PB 629 CG8850-PB 57..595 74..611 921 37.1 Plus
CG1698-PB 654 CG1698-PB 72..620 72..615 918 35.7 Plus
CG1698-PA 654 CG1698-PA 72..620 72..615 918 35.7 Plus
CG4476-PB 629 CG4476-PB 44..593 67..615 894 35.3 Plus
List-PD 564 CG15088-PD 15..554 71..611 857 34.7 Plus
List-PC 387 CG15088-PC 15..347 71..406 636 40.1 Plus
CG33296-PC 585 CG33296-PC 20..552 74..608 355 23.2 Plus
CG33296-PB 585 CG33296-PB 20..552 74..608 355 23.2 Plus
CG13795-PC 594 CG13795-PC 20..561 74..608 353 23.9 Plus
CG13795-PB 594 CG13795-PB 20..561 74..608 353 23.9 Plus
CG13796-PD 641 CG13796-PD 81..610 71..608 340 24.6 Plus
CG13796-PC 641 CG13796-PC 81..610 71..608 340 24.6 Plus
CG13796-PA 641 CG13796-PA 81..610 71..608 340 24.6 Plus
CG13796-PB 641 CG13796-PB 81..610 71..608 340 24.6 Plus
CG13793-PB 583 CG13793-PB 12..533 74..586 337 24.3 Plus
CG13794-PA 595 CG13794-PA 20..565 74..608 330 23.6 Plus
bdg-PD 1330 CG8291-PD 446..1086 25..608 267 21.5 Plus
bdg-PC 1331 CG8291-PC 446..1087 25..608 257 21.4 Plus
bdg-PB 1331 CG8291-PB 446..1087 25..608 257 21.4 Plus
bdg-PA 1331 CG8291-PA 446..1087 25..608 257 21.4 Plus
blot-PB 976 CG3897-PB 146..702 14..589 194 21.6 Plus
blot-PD 976 CG3897-PD 146..702 14..589 194 21.6 Plus
CG31904-PB 403 CG31904-PB 81..214 71..204 188 31.1 Plus
CG31904-PD 403 CG31904-PD 81..214 71..204 188 31.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:16:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18339-PA 763 GI18339-PA 40..639 23..622 3000 94 Plus
Dmoj\GI19005-PA 626 GI19005-PA 25..593 74..606 1549 51.5 Plus
Dmoj\GI11503-PA 633 GI11503-PA 2..623 30..607 1236 40.9 Plus
Dmoj\GI17887-PA 998 GI17887-PA 377..937 74..618 1171 39.8 Plus
Dmoj\GI21256-PA 685 GI21256-PA 40..616 65..611 1118 40.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20450-PA 630 GL20450-PA 1..630 1..622 3031 93.3 Plus
Dper\GL11339-PA 634 GL11339-PA 25..593 74..600 1530 51.5 Plus
Dper\GL18181-PA 634 GL18181-PA 10..623 27..607 1251 40.9 Plus
Dper\GL16025-PA 886 GL16025-PA 260..820 74..618 1176 38.5 Plus
Dper\GL11035-PA 1001 GL11035-PA 34..581 70..586 1130 41.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25115-PA 630 GA25115-PA 1..630 1..622 3031 93.3 Plus
Dpse\GA21033-PA 634 GA21033-PA 25..593 74..600 1529 51.5 Plus
Dpse\GA13735-PA 886 GA13735-PA 260..820 74..618 1176 38.5 Plus
Dpse\GA18963-PA 1262 GA18963-PA 124..664 70..586 1144 41.5 Plus
Dpse\GA20082-PA 586 GA20082-PA 2..552 48..608 1090 38.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11839-PA 747 GM11839-PA 1..620 1..620 3274 99.4 Plus
Dsec\GM20052-PA 631 GM20052-PA 27..589 74..599 1515 50.8 Plus
Dsec\GM26805-PA 636 GM26805-PA 17..592 32..586 1264 42.6 Plus
Dsec\GM18085-PA 943 GM18085-PA 337..897 74..618 1178 38.7 Plus
Dsec\GM16050-PA 1193 GM16050-PA 52..623 70..611 1156 41.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25533-PA 631 GD25533-PA 27..589 74..599 1515 50.8 Plus
Dsim\GD11799-PA 1106 GD11799-PA 49..631 70..611 1114 40.5 Plus
Dsim\GD23482-PA 590 GD23482-PA 6..556 56..608 1033 39.4 Plus
Dsim\GD16329-PA 726 GD16329-PA 58..623 17..564 944 37.3 Plus
Dsim\GD11389-PA 675 GD11389-PA 9..619 22..589 897 33.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20736-PA 630 GJ20736-PA 31..630 23..622 3029 94.7 Plus
Dvir\GJ19971-PA 627 GJ19971-PA 2..593 45..606 1561 49.7 Plus
Dvir\GJ13697-PA 635 GJ13697-PA 2..625 30..607 1234 40.4 Plus
Dvir\GJ17389-PA 1001 GJ17389-PA 377..937 74..618 1188 40 Plus
Dvir\GJ20857-PA 1283 GJ20857-PA 642..1218 65..611 1146 40.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22085-PA 634 GK22085-PA 1..634 1..622 3043 91.3 Plus
Dwil\GK21599-PA 664 GK21599-PA 49..629 68..606 1514 49.9 Plus
Dwil\GK13698-PA 632 GK13698-PA 19..588 32..586 1237 42 Plus
Dwil\GK23923-PA 958 GK23923-PA 337..897 74..618 1182 39.6 Plus
Dwil\GK22198-PA 1135 GK22198-PA 42..612 71..611 1174 41.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11465-PA 764 GE11465-PA 1..622 1..622 3279 99.2 Plus
Dyak\GE14056-PA 631 GE14056-PA 27..590 74..600 1518 50.9 Plus
Dyak\GE14556-PA 636 GE14556-PA 17..592 32..586 1258 42.6 Plus
Dyak\GE14708-PA 944 GE14708-PA 338..898 74..618 1178 38.5 Plus
Dyak\GE14327-PA 562 GE14327-PA 56..556 70..541 1073 42.4 Plus

RE10485.hyp Sequence

Translation from 454 to 2322

> RE10485.hyp
MDRSGSSDFAGAAATTGRSNPAPWSDDKESPNNEDDSNEDDGDHTTPAKV
TDPLAPKLANNERILVVSVTERTRETWGQKAEFLLAVIGFAVDLGNVWRF
PYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRIC
PALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWN
TENCMQVTSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALC
VFGVFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEG
IKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCY
RDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDKVGLEGPGLVFIV
YPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPRVIG
RRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEA
AGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMG
YKEMLGEEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRL
QESFQPEDNCGSVVPGQQGTSV*

RE10485.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
SerT-PB 622 CG4545-PB 1..622 1..622 3327 100 Plus
SerT-PA 622 CG4545-PA 1..622 1..622 3327 100 Plus
DAT-PA 631 CG8380-PA 27..589 74..599 1551 50.8 Plus
DAT-PB 644 CG8380-PB 27..589 74..599 1551 50.8 Plus
CG1732-PA 636 CG1732-PA 29..592 44..586 1316 43.3 Plus