Clone RE10554 Report

Gene	Date	Evidence
CG2960	2001-12-16	Blastp of sequenced clone
CG2960	2002-01-01	Sim4 clustering to Release 2
CG2960	2003-01-01	Sim4 clustering to Release 3
RpL40	2008-04-29	Release 5.5 accounting
RpL40	2008-08-15	Release 5.9 accounting
RpL40	2008-12-18	5.12 accounting

Clone Sequence Records

RE10554.complete Sequence

602 bp (602 high quality bases) assembled on 2001-12-16

GenBank Submission: AY075451

> RE10554.complete
CTCTTTTCCCTTTTTCTTTTGAATAGCATTTGGTTGCACGTTTCCTCTGT
GACGCCGCCATTATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCAT
CACCTTGGAGGTGGAGCCTTCTGACACCATCGAGAATGTCAAGGCTAAGA
TCCAGGATAAGGAGGGCATTCCCCCAGATCAGCAGCGTCTGATCTTCGCC
GGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAA
GGAGTCCACCCTGCACTTGGTGCTCCGCCTGCGTGGTGGTATCATTGAGC
CCTCGCTCAGGATTCTGGCCCAGAAGTACAACTGCGACAAGATGATCTGC
CGCAAGTGCTACGCCCGTCTGCATCCTCGTGCCACCAACTGCCGCAAGAA
GAAGTGCGGACACACCAACAACCTGCGCCCCAAGAAGAAGTTGAAGTAGA
CTATGATCATCCGTCGACGGTCCAGGCTGGTCTTTCTATCGACAAAACCA
TGGTTAACCATCTAAGTAAATATATGTACATTTTGTGAAACCACATCTAA
TCGAAATGTATTGCATTTGCTGCCAAGGCACAGCCCAAAAAAAAAAAAAA
AA

RE10554.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:37:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Ubi-p63E-RA	2475	Ubi-p63E-RA	1970..2200	62..292	795	89.6	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	1514..1744	62..292	795	89.6	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	830..1060	62..292	795	89.6	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	1970..2200	62..292	795	89.6	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	1514..1744	62..292	795	89.6	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	830..1060	62..292	795	89.6	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	2033..2263	62..292	795	89.6	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	1577..1807	62..292	795	89.6	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	893..1123	62..292	795	89.6	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	1742..1972	62..292	765	88.7	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	1286..1516	62..292	765	88.7	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	1058..1288	62..292	765	88.7	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	602..832	62..292	765	88.7	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	1742..1972	62..292	765	88.7	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	1286..1516	62..292	765	88.7	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	1058..1288	62..292	765	88.7	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	602..832	62..292	765	88.7	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	1805..2035	62..292	765	88.7	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	1349..1579	62..292	765	88.7	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	1121..1351	62..292	765	88.7	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	665..895	62..292	765	88.7	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	2198..2429	62..293	755	88.3	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	2198..2429	62..293	755	88.3	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	2261..2492	62..293	755	88.3	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	374..604	62..292	750	88.3	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	374..604	62..292	750	88.3	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	437..667	62..292	750	88.3	Plus
Ubi-p63E-RA	2475	Ubi-p63E-RA	147..376	63..292	730	87.8	Plus
Ubi-p63E.b	2638	Ubi-p63E.b	147..376	63..292	730	87.8	Plus
Ubi-p63E-RC	2710	Ubi-p63E-RC	210..439	63..292	730	87.8	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:45:18

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2L	23010047	chr2L	4227191..4227727	49..585	2685	100	Plus
chr3L	24539361	chr3L	3899161..3899391	292..62	795	89.6	Minus
chr3L	24539361	chr3L	3899617..3899847	292..62	795	89.6	Minus
chr3L	24539361	chr3L	3900301..3900531	292..62	795	89.6	Minus
chr3L	24539361	chr3L	3900529..3900759	292..62	765	88.7	Minus
chr3L	24539361	chr3L	3899389..3899619	292..62	765	88.7	Minus
chr3L	24539361	chr3L	3899845..3900075	292..62	765	88.7	Minus
chr3L	24539361	chr3L	3900073..3900303	292..62	765	88.7	Minus
chrX	22417052	chrX	6170473..6170699	289..63	760	89	Minus
chr3L	24539361	chr3L	3898932..3899163	293..62	755	88.4	Minus
chr3L	24539361	chr3L	3900757..3900987	292..62	750	88.3	Minus
chrX	22417052	chrX	6170701..6170928	289..62	735	88.2	Minus
chr3L	24539361	chr3L	3900985..3901214	292..63	730	87.8	Minus
chrX	22417052	chrX	6169333..6169559	289..63	730	88.1	Minus
chrX	22417052	chrX	6169561..6169787	289..63	730	88.1	Minus
chrX	22417052	chrX	6169789..6170015	289..63	730	88.1	Minus
chrX	22417052	chrX	6170017..6170243	289..63	730	88.1	Minus
chrX	22417052	chrX	6170245..6170471	289..63	730	88.1	Minus
chr2L	23010047	chr2L	10408579..10408806	63..290	705	87.3	Plus
chrX	22417052	chrX	6174686..6174912	289..63	655	85.9	Minus
chrX	22417052	chrX	6174914..6175140	289..63	625	85	Minus
chrX	22417052	chrX	6175142..6175368	289..63	625	85	Minus
chrX	22417052	chrX	6174481..6174684	266..63	600	86.3	Minus
chrX	22417052	chrX	6172948..6173076	181..53	270	80.6	Minus
chr2L	23010047	chr2L	4226881..4226929	1..49	245	100	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 20:32:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CR11700-RA	1058	CR11700-RA	609..835	63..289	655	85.9	Plus
CR11700-RA	1058	CR11700-RA	381..607	63..289	625	85	Plus
CR11700-RA	1058	CR11700-RA	153..379	63..289	625	85	Plus
CR11700-RA	1058	CR11700-RA	837..1040	63..266	585	85.7	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:45:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2L	23513712	2L	4228011..4228547	49..585	2685	100	Plus
3L	28110227	3L	3899706..3899936	292..62	795	89.6	Minus
3L	28110227	3L	3900162..3900392	292..62	795	89.6	Minus
3L	28110227	3L	3900846..3901076	292..62	795	89.6	Minus
3L	28110227	3L	3899934..3900164	292..62	765	88.7	Minus
3L	28110227	3L	3900390..3900620	292..62	765	88.7	Minus
3L	28110227	3L	3900618..3900848	292..62	765	88.7	Minus
3L	28110227	3L	3901074..3901304	292..62	765	88.7	Minus
X	23542271	X	6278294..6278520	289..63	760	89	Minus
3L	28110227	3L	3899477..3899708	293..62	755	88.4	Minus
3L	28110227	3L	3901302..3901532	292..62	750	88.3	Minus
X	23542271	X	6277154..6277380	289..63	745	88.5	Minus
X	23542271	X	6278522..6278749	289..62	735	88.2	Minus
3L	28110227	3L	3901530..3901759	292..63	730	87.8	Minus
X	23542271	X	6277382..6277608	289..63	730	88.1	Minus
X	23542271	X	6277610..6277836	289..63	730	88.1	Minus
X	23542271	X	6277838..6278064	289..63	730	88.1	Minus
X	23542271	X	6278066..6278292	289..63	730	88.1	Minus
2L	23513712	2L	10409731..10409958	63..290	705	87.3	Plus
X	23542271	X	6282501..6282727	289..63	655	85.9	Minus
X	23542271	X	6282729..6282955	289..63	625	85	Minus
X	23542271	X	6282957..6283183	289..63	625	85	Minus
X	23542271	X	6282296..6282499	266..63	585	85.8	Minus
X	23542271	X	6280764..6280892	181..53	270	80.6	Minus
2L	23513712	2L	4227701..4227749	1..49	245	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:05:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2L	23513712	2L	4228011..4228547	49..585	2685	100	Plus
3L	28103327	3L	3900846..3901076	292..62	795	89.6	Minus
3L	28103327	3L	3900162..3900392	292..62	795	89.6	Minus
3L	28103327	3L	3899706..3899936	292..62	795	89.6	Minus
3L	28103327	3L	3901074..3901304	292..62	765	88.7	Minus
3L	28103327	3L	3900618..3900848	292..62	765	88.7	Minus
3L	28103327	3L	3900390..3900620	292..62	765	88.7	Minus
3L	28103327	3L	3899934..3900164	292..62	765	88.7	Minus
X	23527363	X	6286392..6286618	289..63	760	88.9	Minus
3L	28103327	3L	3899477..3899708	293..62	755	88.3	Minus
3L	28103327	3L	3901302..3901532	292..62	750	88.3	Minus
X	23527363	X	6285252..6285478	289..63	745	88.5	Minus
X	23527363	X	6286620..6286847	289..62	735	88.1	Minus
X	23527363	X	6286164..6286390	289..63	730	88.1	Minus
X	23527363	X	6285936..6286162	289..63	730	88.1	Minus
X	23527363	X	6285708..6285934	289..63	730	88.1	Minus
X	23527363	X	6285480..6285706	289..63	730	88.1	Minus
3L	28103327	3L	3901530..3901759	292..63	730	87.8	Minus
2L	23513712	2L	10409731..10409958	63..290	705	87.2	Plus
X	23527363	X	6290599..6290825	289..63	655	85.9	Minus
X	23527363	X	6291055..6291281	289..63	625	85	Minus
X	23527363	X	6290827..6291053	289..63	625	85	Minus
X	23527363	X	6290394..6290597	266..63	585	85.7	Minus
X	23527363	X	6288862..6288990	181..53	270	80.6	Minus
2L	23513712	2L	4227701..4227749	1..49	245	100	Plus

Blast to na_te.dros performed on 2019-03-16 18:45:16 has no hits.

RE10554.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:46:18 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2L	4226881..4226929	1..49	100	->	Plus
chr2L	4227192..4227727	50..586	99		Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed on 2008-12-08 19:53:15 has no hits.

Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 19:01:05 has no hits.

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:16:50 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
RpL40-RA	1..387	63..449	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 19:25:42 has no hits.

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:49:27 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
RpL40-RA	1..387	63..449	100		Plus

Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:32:53 has no hits.

Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-10 22:27:19 has no hits.

Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 19:01:05 has no hits.

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:16:50 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
RpL40-RA	3..587	1..585	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:33:11 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ubi-p63E-RA	830..1060	62..292	89		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:49:27 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
RpL40-RA	3..587	1..585	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:46:18 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2L	4227701..4227749	1..49	100	->	Plus
2L	4228012..4228547	50..586	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:46:18 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2L	4227701..4227749	1..49	100	->	Plus
2L	4228012..4228547	50..586	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:46:18 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2L	4227701..4227749	1..49	100	->	Plus
2L	4228012..4228547	50..586	99		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:16:50 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2L	4227701..4227749	1..49	100	->	Plus
arm_2L	4228012..4228547	50..586	99		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:01:14 Download gff for RE10554.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2L	4228012..4228547	50..586	99		Plus
2L	4227701..4227749	1..49	100	->	Plus

RE10554.pep Sequence

Translation from 62 to 448

> RE10554.pep
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCY
ARLHPRATNCRKKKCGHTNNLRPKKKLK*

RE10554.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:16:28

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF15052-PA	128	GF15052-PA	1..128	1..128	671	100	Plus
Dana\GF10254-PA	837	GF10254-PA	761..837	1..77	399	100	Plus
Dana\GF20300-PA	610	GF20300-PA	457..533	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	1..77	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	77..153	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	153..229	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	229..305	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	305..381	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	381..457	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	1..77	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	77..153	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	153..229	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	229..305	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	305..381	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	381..457	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	457..533	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	533..609	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	609..685	1..77	396	98.7	Plus
Dana\GF10254-PA	837	GF10254-PA	685..761	1..77	396	98.7	Plus
Dana\GF20300-PA	610	GF20300-PA	533..610	1..78	395	97.4	Plus
Dana\GF15783-PA	156	GF15783-PA	1..76	1..76	391	100	Plus
Dana\GF14648-PA	81	GF14648-PA	1..76	1..76	244	57.9	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:16:29

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG24988-PA	128	GG24988-PA	1..128	1..128	671	100	Plus
Dere\GG17684-PA	534	GG17684-PA	457..534	1..78	397	98.7	Plus
Dere\GG19855-PA	328	GG19855-PA	59..135	1..77	396	98.7	Plus
Dere\GG19855-PA	328	GG19855-PA	135..211	1..77	396	98.7	Plus
Dere\GG19855-PA	328	GG19855-PA	211..287	1..77	396	98.7	Plus
Dere\GG17684-PA	534	GG17684-PA	1..77	1..77	396	98.7	Plus
Dere\GG17684-PA	534	GG17684-PA	77..153	1..77	396	98.7	Plus
Dere\GG17684-PA	534	GG17684-PA	153..229	1..77	396	98.7	Plus
Dere\GG17684-PA	534	GG17684-PA	229..305	1..77	396	98.7	Plus
Dere\GG17684-PA	534	GG17684-PA	305..381	1..77	396	98.7	Plus
Dere\GG17684-PA	534	GG17684-PA	381..457	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	1..77	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	77..153	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	153..229	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	229..305	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	305..381	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	381..457	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	457..533	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	533..609	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	609..685	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	685..761	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	761..837	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	837..913	1..77	396	98.7	Plus
Dere\GG14240-PA	991	GG14240-PA	913..989	1..77	396	98.7	Plus
Dere\GG10127-PA	156	GG10127-PA	1..76	1..76	391	100	Plus
Dere\GG19855-PA	328	GG19855-PA	1..59	19..77	308	98.3	Plus
Dere\GG19855-PA	328	GG19855-PA	287..323	1..37	162	89.2	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:16:29

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH10063-PA	128	GH10063-PA	1..128	1..128	671	100	Plus
Dgri\GH15714-PA	535	GH15714-PA	1..77	1..77	395	98.7	Plus
Dgri\GH15714-PA	535	GH15714-PA	77..153	1..77	395	98.7	Plus
Dgri\GH15714-PA	535	GH15714-PA	153..229	1..77	395	98.7	Plus
Dgri\GH15714-PA	535	GH15714-PA	229..305	1..77	395	98.7	Plus
Dgri\GH15714-PA	535	GH15714-PA	305..381	1..77	395	98.7	Plus
Dgri\GH15714-PA	535	GH15714-PA	381..457	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	229..305	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	305..381	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	381..457	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	457..533	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	1..77	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	77..153	1..77	395	98.7	Plus
Dgri\GH12661-PA	699	GH12661-PA	153..229	1..77	395	98.7	Plus
Dgri\GH15714-PA	535	GH15714-PA	457..532	1..76	394	100	Plus
Dgri\GH13542-PA	156	GH13542-PA	1..76	1..76	391	100	Plus
Dgri\GH12661-PA	699	GH12661-PA	533..597	1..65	336	100	Plus
Dgri\GH11603-PA	81	GH11603-PA	1..76	1..76	245	57.9	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
RpL40-PB	128	CG2960-PB	1..128	1..128	670	100	Plus
RpL40-PA	128	CG2960-PA	1..128	1..128	670	100	Plus
Ubi-p63E-PD	763	CG11624-PD	685..761	1..77	385	100	Plus
Ubi-p63E-PB	763	CG11624-PB	685..761	1..77	385	100	Plus
Ubi-p63E-PC	763	CG11624-PC	685..761	1..77	385	100	Plus
Ubi-p63E-PA	763	CG11624-PA	685..761	1..77	385	100	Plus
Ubi-p5E-PB	534	CG32744-PB	457..534	1..78	384	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	457..534	1..78	384	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	1..77	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	77..153	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	153..229	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	229..305	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	305..381	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	381..457	1..77	382	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	229..305	1..77	382	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	305..381	1..77	382	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	381..457	1..77	382	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	1..77	1..77	382	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	77..153	1..77	382	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	153..229	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	381..457	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	457..533	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	533..609	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	609..685	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	1..77	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	77..153	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	153..229	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	305..381	1..77	382	98.7	Plus
Ubi-p63E-PD	763	CG11624-PD	229..305	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	1..77	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	77..153	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	153..229	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	229..305	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	305..381	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	381..457	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	457..533	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	533..609	1..77	382	98.7	Plus
Ubi-p63E-PB	763	CG11624-PB	609..685	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	1..77	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	77..153	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	153..229	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	229..305	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	305..381	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	457..533	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	533..609	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	609..685	1..77	382	98.7	Plus
Ubi-p63E-PC	763	CG11624-PC	381..457	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	1..77	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	77..153	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	153..229	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	229..305	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	305..381	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	381..457	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	457..533	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	533..609	1..77	382	98.7	Plus
Ubi-p63E-PA	763	CG11624-PA	609..685	1..77	382	98.7	Plus
RpS27A-PA	156	CG5271-PA	1..76	1..76	381	100	Plus
CG11700-PB	301	CG11700-PB	153..229	1..77	370	94.8	Plus
CG11700-PB	301	CG11700-PB	1..77	1..77	336	87	Plus
CG11700-PB	301	CG11700-PB	77..153	1..77	336	87	Plus
CG11700-PB	301	CG11700-PB	229..296	1..68	318	91.2	Plus
Nedd8-PB	84	CG10679-PB	1..76	1..76	245	57.9	Plus
Nedd8-PA	84	CG10679-PA	1..76	1..76	245	57.9	Plus
park-PC	482	CG10523-PC	30..102	1..74	160	43.2	Plus
park-PB	482	CG10523-PB	30..102	1..74	160	43.2	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:16:30

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI16482-PA	128	GI16482-PA	1..128	1..128	671	100	Plus
Dmoj\GI21526-PA	609	GI21526-PA	1..77	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	77..153	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	153..229	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	229..305	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	305..381	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	381..457	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	457..533	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	1..77	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	77..153	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	153..229	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	229..305	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	305..381	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	381..457	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	457..533	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	533..609	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	609..685	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	685..761	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	761..837	1..77	396	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	837..913	1..77	396	98.7	Plus
Dmoj\GI21526-PA	609	GI21526-PA	533..608	1..76	395	100	Plus
Dmoj\GI14272-PA	668	GI14272-PA	1..77	1..77	395	98.7	Plus
Dmoj\GI14272-PA	668	GI14272-PA	77..153	1..77	395	98.7	Plus
Dmoj\GI14272-PA	668	GI14272-PA	153..229	1..77	395	98.7	Plus
Dmoj\GI14272-PA	668	GI14272-PA	229..305	1..77	395	98.7	Plus
Dmoj\GI14272-PA	668	GI14272-PA	305..381	1..77	395	98.7	Plus
Dmoj\GI14272-PA	668	GI14272-PA	381..457	1..77	395	98.7	Plus
Dmoj\GI14272-PA	668	GI14272-PA	457..533	1..77	395	98.7	Plus
Dmoj\GI12770-PA	991	GI12770-PA	913..988	1..76	395	100	Plus
Dmoj\GI14272-PA	668	GI14272-PA	533..608	1..76	394	100	Plus
Dmoj\GI10618-PA	156	GI10618-PA	1..76	1..76	391	100	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:16:30

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL13989-PA	128	GL13989-PA	1..128	1..128	671	100	Plus
Dper\GL16204-PA	307	GL16204-PA	229..305	1..77	397	98.7	Plus
Dper\GL16204-PA	307	GL16204-PA	1..77	1..77	395	98.7	Plus
Dper\GL16204-PA	307	GL16204-PA	77..153	1..77	395	98.7	Plus
Dper\GL16204-PA	307	GL16204-PA	153..229	1..77	395	98.7	Plus
Dper\GL14086-PA	79	GL14086-PA	1..77	1..77	394	98.7	Plus
Dper\GL20619-PA	231	GL20619-PA	1..77	1..77	394	98.7	Plus
Dper\GL20619-PA	231	GL20619-PA	154..231	1..78	393	97.4	Plus
Dper\GL18966-PA	156	GL18966-PA	1..76	1..76	391	100	Plus
Dper\GL20619-PA	231	GL20619-PA	77..154	1..77	277	73.2	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:16:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA15543-PA	128	GA15543-PA	1..128	1..128	671	100	Plus
Dpse\GA30006-PA	687	GA30006-PA	609..685	1..77	397	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	1..77	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	77..153	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	153..229	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	229..305	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	305..381	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	381..457	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	457..533	1..77	395	98.7	Plus
Dpse\GA30006-PA	687	GA30006-PA	533..609	1..77	395	98.7	Plus
Dpse\GA24218-PA	156	GA24218-PA	1..76	1..76	391	100	Plus
Dpse\GA10488-PA	80	GA10488-PA	1..76	1..76	245	57.9	Plus
Dpse\GA10370-PA	471	GA10370-PA	16..93	1..79	152	39.2	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:16:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM18458-PA	128	GM18458-PA	1..128	1..128	665	99.2	Plus
Dsec\GM14032-PA	915	GM14032-PA	837..913	1..77	399	100	Plus
Dsec\GM12582-PA	321	GM12582-PA	77..153	1..77	396	98.7	Plus
Dsec\GM12582-PA	321	GM12582-PA	153..229	1..77	396	98.7	Plus
Dsec\GM12582-PA	321	GM12582-PA	229..305	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	1..77	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	77..153	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	153..229	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	229..305	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	305..381	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	381..457	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	457..533	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	609..685	1..77	396	98.7	Plus
Dsec\GM14032-PA	915	GM14032-PA	685..761	1..77	396	98.7	Plus
Dsec\GM18339-PA	156	GM18339-PA	1..76	1..76	391	100	Plus
Dsec\GM14032-PA	915	GM14032-PA	533..609	1..77	391	97.4	Plus
Dsec\GM12582-PA	321	GM12582-PA	1..77	1..77	388	97.4	Plus
Dsec\GM14032-PA	915	GM14032-PA	761..837	1..77	387	97.4	Plus
Dsec\GM17051-PA	84	GM17051-PA	1..76	1..76	243	57.9	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:16:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD12014-PA	128	GD12014-PA	1..128	1..128	671	100	Plus
Dsim\GD16200-PA	105	GD16200-PA	1..77	1..77	398	100	Plus
Dsim\GD13313-PA	195	GD13313-PA	1..77	1..77	395	98.7	Plus
Dsim\GD13313-PA	195	GD13313-PA	77..153	1..77	395	98.7	Plus
Dsim\GD13314-PA	300	GD13314-PA	77..153	1..77	395	98.7	Plus
Dsim\GD13314-PA	300	GD13314-PA	153..229	1..77	395	98.7	Plus
Dsim\GD23696-PA	156	GD23696-PA	1..76	1..76	391	100	Plus
Dsim\GD13314-PA	300	GD13314-PA	1..77	1..77	386	96.1	Plus
Dsim\GD13314-PA	300	GD13314-PA	229..269	1..41	209	100	Plus
Dsim\GD13313-PA	195	GD13313-PA	153..192	1..40	204	100	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:16:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ16220-PA	128	GJ16220-PA	1..128	1..128	671	100	Plus
Dvir\GJ16068-PA	384	GJ16068-PA	1..77	1..77	396	98.7	Plus
Dvir\GJ16068-PA	384	GJ16068-PA	77..153	1..77	396	98.7	Plus
Dvir\GJ16068-PA	384	GJ16068-PA	153..229	1..77	396	98.7	Plus
Dvir\GJ16068-PA	384	GJ16068-PA	229..305	1..77	396	98.7	Plus
Dvir\GJ16000-PA	457	GJ16000-PA	1..77	1..77	396	98.7	Plus
Dvir\GJ16000-PA	457	GJ16000-PA	77..153	1..77	396	98.7	Plus
Dvir\GJ16000-PA	457	GJ16000-PA	153..229	1..77	396	98.7	Plus
Dvir\GJ16000-PA	457	GJ16000-PA	229..305	1..77	396	98.7	Plus
Dvir\GJ16000-PA	457	GJ16000-PA	305..381	1..77	396	98.7	Plus
Dvir\GJ16000-PA	457	GJ16000-PA	381..456	1..76	394	100	Plus
Dvir\GJ21841-PA	156	GJ21841-PA	1..76	1..76	391	100	Plus
Dvir\GJ17678-PA	83	GJ17678-PA	1..76	1..76	244	57.9	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:16:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK24609-PA	128	GK24609-PA	1..128	1..128	671	100	Plus
Dwil\GK10077-PA	610	GK10077-PA	1..77	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	77..153	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	153..229	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	229..305	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	305..381	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	381..457	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	457..533	1..77	396	98.7	Plus
Dwil\GK10077-PA	610	GK10077-PA	533..608	1..76	395	100	Plus
Dwil\GK18589-PA	156	GK18589-PA	1..76	1..76	391	100	Plus
Dwil\GK20481-PA	611	GK20481-PA	1..77	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	77..153	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	153..229	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	229..305	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	305..381	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	381..457	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	457..533	1..77	390	97.4	Plus
Dwil\GK20481-PA	611	GK20481-PA	533..608	1..76	389	98.7	Plus
Dwil\GK24685-PA	78	GK24685-PA	1..76	1..76	242	57.9	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:16:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\RpL40-PA	128	GE18276-PA	1..128	1..128	671	100	Plus
Dyak\GE20668-PA	79	GE20668-PA	1..77	1..77	398	100	Plus
Dyak\GE16472-PA	230	GE16472-PA	153..230	1..78	397	98.7	Plus
Dyak\GE16472-PA	230	GE16472-PA	1..77	1..77	396	98.7	Plus
Dyak\GE16472-PA	230	GE16472-PA	77..153	1..77	396	98.7	Plus
Dyak\RpS27A-PA	156	GE11312-PA	1..76	1..76	391	100	Plus
Dyak\GE18939-PA	156	GE18939-PA	1..76	1..76	391	100	Plus

RE10554.hyp Sequence

Translation from 62 to 448

> RE10554.hyp
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCY
ARLHPRATNCRKKKCGHTNNLRPKKKLK*

RE10554.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:26:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
RpL40-PB	128	CG2960-PB	1..128	1..128	670	100	Plus
RpL40-PA	128	CG2960-PA	1..128	1..128	670	100	Plus
Ubi-p5E-PB	534	CG32744-PB	457..534	1..78	384	98.7	Plus
Ubi-p5E-PA	534	CG32744-PA	457..534	1..78	384	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	1..77	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	77..153	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	153..229	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	229..305	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	305..381	1..77	382	98.7	Plus
Ubi-p5E-PB	534	CG32744-PB	381..457	1..77	382	98.7	Plus
RpS27A-PA	156	CG5271-PA	1..76	1..76	381	100	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	105
Well:	54
Vector:	pFlc-1
Associated Gene/Transcript	RpL40-RA
Protein status:	RE10554.pep: gold
Sequenced Size:	602

Clone RE10554 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE10554.complete Sequence

RE10554.complete Blast Records

RE10554.complete Sim4 Records

RE10554.pep Sequence

RE10554.pep Blast Records

RE10554.hyp Sequence

RE10554.hyp Blast Records