BDGP Sequence Production Resources |
Search the DGRC for RE10813
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 108 |
Well: | 13 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31495-RA |
Protein status: | RE10813.pep: gold |
Preliminary Size: | 3549 |
Sequenced Size: | 1706 |
Gene | Date | Evidence |
---|---|---|
CG9931 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31495 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31495 | 2004-11-04 | Blastp of sequenced clone |
CG31495 | 2008-04-29 | Release 5.5 accounting |
CG31495 | 2008-08-15 | Release 5.9 accounting |
CG31495 | 2008-12-18 | 5.12 accounting |
1706 bp (1706 high quality bases) assembled on 2004-11-04
GenBank Submission: BT021318
> RE10813.complete GCAGTTATCGCAATCGATTTTAGGTGGATAACATAATATACAAAACCATT TTGTAAAGAACAGCTGATACAATTTGACCATTTCATATCCAATATAATTT CTCCATAAAAGAAGCCAACCCGGGCGCCAAGATGGTCAACATCACTTTAC CCAACACTGAGGAGCGTGTGAACCTCTTAAAATCGCGCATCAACAGGCTG GGTGACATTACGGTGGCCGGCGATGTTTGCGCACGCGAAATTGCAATGAA AACCAAAAATTTCACGGAGGACGAGCTGTGCCAACTGGTCCGAGAAGCCC TCCATGAAGCCATTGTCCGCACTCACGTCACCAGATGCCCGAAGGGCCTT CAAGTCACTCAGGTCGATCTCCTGGCCGCGGTAAAGATCATTCAGCCACG ATTTGGCCGGCAGGAGGAGACTCTCCAGCTGCTCATGCCATATGAATATC TAGATCGTACCGCTTTCGATCCGAATGATCTCCTGTCCACCGGACGCCCA AGATGGTCTTGCCATCTGGTCGAAGGTAAGCCCAAGTCAGGCCTAACTAC GGTGGCCGCTCAAATGGCTTTGAAAACAGACTGCCCTTTTATAAAATACA TCTCGTCGGCCGAATTGCTGGGACTTAGCGATTCCGAAAAATGCCAGAGA ATACGGGAAGTCTTGGAGGACGCCTATGTTTCCAGGCGCAGCTGCGTCAT CATTGACGACTTTGAGCGTGTCATTGGTTACGGCGCCCTGGGTAAGCGGT ACTCCAAGGAGTTCCTGCAGAAGCTGACGGTTCTTCTGAAGAAACAACCG CCCAACAGCCACGAGCTCATCATCATTTGCACAAGCAATCGTCTCGATGT CCTGGAGGAACTGGGCTTGCTATCCGTTTTCACTTCAGTTCACAATGTGC CAAATGTTTCCACGCCTAAAGAACTTATGGTCATAGTGGAAGCTTCAAAA CGATTCGAGCCCGAGGAGCTACGCCAAATCGAGATCGCCATGGATGGCCG CAACGTCTCCATTGGCATCAAACGGTTGCTTGACTTGATTGCGTGGGTGA ATTCCCTAAATCCCGACCGTCGAGCTGCCAAATTGCTGAAGAAATTGGGC GAAGCAATGGGATGGGTAGGGAACCATTCTAGTCCACTTGTACCTCAATA CATTTAAGACGTTAGGTTAGGAAATGCAATATTGTATCTACAATTCCAGG AAAATAATTCCAAGTGATTCCAAATAATTCAGTAATGCTTTATATTTAAA AGAACCACGTAAGCATAAAAAAACCATCTAAAAAAATAATATTGCATTAT TTTTTGGATGAACTTGCTTCCATTGCATTGCAATGTTCTTAAGACTAAAA TGAACAGCCCGATAATGTGATTGCAAAGATACTAGATTATTATATTATAT ATATATTATATATACACCAGGCCAGACCTCTCAGTGGCCTTCGCCTGCTG TACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGACCGGTGGGCCCAACA TCTCCTGGGCTGCTCCAAAGGCGGGCTTGATGTCGTTGTCCAATATATAT ATATATACATAATTATATATATAATATATATTATATATTATATATATATA TTATATTGTTCTAGTGTCTTTGGTGATTGGCATAACAAGTTTTATTACCA TATTATATATATATAAGTAAAAATAAAGATATTTGAATTGCAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31495-RA | 1693 | CG31495-RA | 1..1693 | 1..1693 | 8465 | 100 | Plus |
Nsf2-RA | 2907 | Nsf2-RA | 1707..1789 | 1496..1414 | 400 | 98.7 | Minus |
Nsf2.b | 3111 | Nsf2.b | 1619..1701 | 1496..1414 | 400 | 98.7 | Minus |
Nsf2-RA | 2907 | Nsf2-RA | 1626..1675 | 1544..1495 | 235 | 98 | Minus |
Nsf2.b | 3111 | Nsf2.b | 1538..1587 | 1544..1495 | 235 | 98 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9663184..9664862 | 1691..1 | 8040 | 98.6 | Minus |
chr3R | 27901430 | chr3R | 9660267..9660349 | 1414..1496 | 400 | 98.8 | Plus |
chr3R | 27901430 | chr3R | 9660381..9660430 | 1495..1544 | 250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13838237..13839930 | 1694..1 | 8470 | 100 | Minus |
3R | 32079331 | 3R | 13835312..13835394 | 1414..1496 | 400 | 98.8 | Plus |
3R | 32079331 | 3R | 13835426..13835475 | 1495..1544 | 235 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13579068..13580761 | 1694..1 | 8470 | 100 | Minus |
3R | 31820162 | 3R | 13576143..13576225 | 1414..1496 | 400 | 98.7 | Plus |
3R | 31820162 | 3R | 13576257..13576306 | 1495..1544 | 235 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc3 | 1743 | Tc3 TC3 1743bp | 239..318 | 1626..1545 | 206 | 75.6 | Minus |
Tc3 | 1743 | Tc3 TC3 1743bp | 259..333 | 1549..1624 | 196 | 77.9 | Plus |
frogger | 2483 | frogger FROGGER 2483bp | 193..293 | 1149..1247 | 130 | 64.1 | Plus |
Circe | 7450 | Circe CIRC 7450bp | 1897..1941 | 1282..1327 | 119 | 76.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9663333..9664862 | 1..1542 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1026 | 132..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1026 | 132..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1026 | 132..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1026 | 132..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1026 | 132..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1691 | 1..1691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1691 | 1..1691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1691 | 1..1691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 1..1691 | 1..1691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31495-RA | 5..1695 | 1..1691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13838240..13839930 | 1..1691 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13838240..13839930 | 1..1691 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13838240..13839930 | 1..1691 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9663962..9665652 | 1..1691 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13579071..13580761 | 1..1691 | 100 | Minus |
Translation from 131 to 1156
> RE10813.pep MVNITLPNTEERVNLLKSRINRLGDITVAGDVCAREIAMKTKNFTEDELC QLVREALHEAIVRTHVTRCPKGLQVTQVDLLAAVKIIQPRFGRQEETLQL LMPYEYLDRTAFDPNDLLSTGRPRWSCHLVEGKPKSGLTTVAAQMALKTD CPFIKYISSAELLGLSDSEKCQRIREVLEDAYVSRRSCVIIDDFERVIGY GALGKRYSKEFLQKLTVLLKKQPPNSHELIIICTSNRLDVLEELGLLSVF TSVHNVPNVSTPKELMVIVEASKRFEPEELRQIEIAMDGRNVSIGIKRLL DLIAWVNSLNPDRRAAKLLKKLGEAMGWVGNHSSPLVPQYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21411-PA | 745 | GF21411-PA | 393..738 | 2..327 | 547 | 39.2 | Plus |
Dana\GF16398-PA | 747 | GF16398-PA | 394..739 | 2..327 | 532 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17764-PA | 745 | GG17764-PA | 393..738 | 2..327 | 540 | 38.9 | Plus |
Dere\GG17019-PA | 751 | GG17019-PA | 398..743 | 2..327 | 534 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24638-PA | 745 | GH24638-PA | 395..738 | 4..327 | 514 | 39.4 | Plus |
Dgri\GH14042-PA | 750 | GH14042-PA | 397..742 | 2..327 | 506 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31495-PB | 341 | CG31495-PB | 1..341 | 1..341 | 1738 | 100 | Plus |
CG31495-PA | 341 | CG31495-PA | 1..341 | 1..341 | 1738 | 100 | Plus |
Nsf2-PC | 752 | CG33101-PC | 398..743 | 2..327 | 573 | 39.9 | Plus |
Nsf2-PB | 752 | CG33101-PB | 398..743 | 2..327 | 573 | 39.9 | Plus |
Nsf2-PA | 752 | CG33101-PA | 398..743 | 2..327 | 573 | 39.9 | Plus |
comt-PB | 745 | CG1618-PB | 393..738 | 2..327 | 522 | 38.6 | Plus |
comt-PA | 745 | CG1618-PA | 393..738 | 2..327 | 522 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24416-PA | 750 | GI24416-PA | 397..742 | 2..327 | 533 | 38.7 | Plus |
Dmoj\GI21685-PA | 745 | GI21685-PA | 393..738 | 2..327 | 529 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24082-PA | 742 | GL24082-PA | 389..734 | 2..327 | 535 | 38.4 | Plus |
Dper\GL13314-PA | 745 | GL13314-PA | 393..738 | 2..327 | 535 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22832-PA | 745 | GA22832-PA | 393..738 | 2..327 | 535 | 38 | Plus |
Dpse\GA17281-PA | 742 | GA17281-PA | 389..734 | 2..327 | 535 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25904-PA | 341 | GM25904-PA | 1..341 | 1..341 | 1728 | 95.3 | Plus |
Dsec\GM25905-PA | 752 | GM25905-PA | 398..743 | 2..327 | 527 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20472-PA | 282 | GD20472-PA | 1..273 | 1..273 | 1352 | 93.4 | Plus |
Dsim\GD20473-PA | 669 | GD20473-PA | 325..660 | 12..327 | 529 | 39.6 | Plus |
Dsim\GD17110-PA | 707 | GD17110-PA | 387..697 | 4..294 | 478 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15864-PA | 745 | GJ15864-PA | 393..738 | 2..327 | 509 | 37.3 | Plus |
Dvir\GJ14275-PA | 750 | GJ14275-PA | 397..742 | 2..327 | 509 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13058-PA | 750 | GK13058-PA | 399..742 | 4..327 | 520 | 38.1 | Plus |
Dwil\GK18341-PA | 745 | GK18341-PA | 393..738 | 2..327 | 506 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24412-PA | 338 | GE24412-PA | 1..336 | 1..331 | 1326 | 77.4 | Plus |
Dyak\GE24411-PA | 167 | GE24411-PA | 1..163 | 1..159 | 652 | 77.9 | Plus |
Dyak\GE24413-PA | 751 | GE24413-PA | 398..743 | 2..327 | 546 | 39.3 | Plus |
Dyak\GE17054-PA | 745 | GE17054-PA | 393..738 | 2..327 | 539 | 38.9 | Plus |
Translation from 131 to 1156
> RE10813.hyp MVNITLPNTEERVNLLKSRINRLGDITVAGDVCAREIAMKTKNFTEDELC QLVREALHEAIVRTHVTRCPKGLQVTQVDLLAAVKIIQPRFGRQEETLQL LMPYEYLDRTAFDPNDLLSTGRPRWSCHLVEGKPKSGLTTVAAQMALKTD CPFIKYISSAELLGLSDSEKCQRIREVLEDAYVSRRSCVIIDDFERVIGY GALGKRYSKEFLQKLTVLLKKQPPNSHELIIICTSNRLDVLEELGLLSVF TSVHNVPNVSTPKELMVIVEASKRFEPEELRQIEIAMDGRNVSIGIKRLL DLIAWVNSLNPDRRAAKLLKKLGEAMGWVGNHSSPLVPQYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31495-PB | 341 | CG31495-PB | 1..341 | 1..341 | 1738 | 100 | Plus |
CG31495-PA | 341 | CG31495-PA | 1..341 | 1..341 | 1738 | 100 | Plus |
Nsf2-PC | 752 | CG33101-PC | 398..743 | 2..327 | 573 | 39.9 | Plus |
Nsf2-PB | 752 | CG33101-PB | 398..743 | 2..327 | 573 | 39.9 | Plus |
Nsf2-PA | 752 | CG33101-PA | 398..743 | 2..327 | 573 | 39.9 | Plus |