BDGP Sequence Production Resources |
Search the DGRC for RE11282
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 112 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG30105-RA |
Protein status: | RE11282.pep: gold |
Sequenced Size: | 598 |
Gene | Date | Evidence |
---|---|---|
CG30105 | 2002-08-23 | Blastp of sequenced clone |
CG30105 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30105 | 2008-04-29 | Release 5.5 accounting |
CG30105 | 2008-08-15 | Release 5.9 accounting |
CG30105 | 2008-12-18 | 5.12 accounting |
598 bp (598 high quality bases) assembled on 2002-08-23
GenBank Submission: BT001550
> RE11282.complete GTTTACCTTTTATTTTGCGCAAAAAGTAACAATGTCAATTACTCTAGATT TTAATGGTAAGAACTTTGCCAAGGGTAAGAATTTAGACGTGCACTACTTG CCGGCCAAAATAGACGGCGATGGGGAAGCGAATGTAAAAAATTACTTCAA CAACTACACACGTGAAGCAACCGAATTCGGCACAGGAATCCTGACGAACG CCTTGCGCGGATTTCCTTTAATGGGAGAGAAGTTGAAAGTGCCCGAAGGA TACTGCGGATTAGTTCTGCAAGAAACAGAGAAGCCCATCAGCGATACCTC CGACCGAAAGTTGCGGCTAACTGGAGTATTTCAAGATTTTACTTACTGGA ACTACGACAAAGTGCCGTCCAATGGCGATCCCTACCGACAGGCCCTTCCT CTGCCGGATGTTGCTCAAGCTCTCTCGCAGCCCATTAGCGAAGAGGATTT AGAGAAAGAAATCGCTCGTAATAAGGAAAACGTCAAGGAAAGCACGTAGT TTTGTTTTAATCGCGCTTACCGCGTTCTATTTATTACTCCAAAATCTAAT CCAATACATATATATCGTACATTTTATCTGGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30105-RA | 767 | CG30105-RA | 100..687 | 1..588 | 2910 | 99.6 | Plus |
CG30105.a | 498 | CG30105.a | 102..498 | 185..581 | 1985 | 100 | Plus |
icln-RA | 913 | icln-RA | 829..913 | 588..504 | 395 | 97.6 | Minus |
CG30105.a | 498 | CG30105.a | 47..103 | 1..57 | 285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13478867..13479027 | 422..582 | 99 | <- | Minus |
chr2R | 13479092..13479512 | 1..421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..468 | 32..499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..468 | 32..499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..468 | 32..499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..468 | 32..499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..468 | 32..499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..580 | 1..580 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 47..627 | 1..581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 62..642 | 1..581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 1..580 | 1..580 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30105-RA | 62..642 | 1..581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17591803..17591963 | 422..582 | 99 | <- | Minus |
2R | 17592028..17592448 | 1..421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17591803..17591963 | 422..582 | 99 | <- | Minus |
2R | 17592028..17592448 | 1..421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17591803..17591963 | 422..582 | 99 | <- | Minus |
2R | 17592028..17592448 | 1..421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13479308..13479468 | 422..582 | 99 | <- | Minus |
arm_2R | 13479533..13479953 | 1..421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17593227..17593647 | 1..421 | 100 | Minus | |
2R | 17593002..17593162 | 422..582 | 99 | <- | Minus |
Translation from 0 to 498
> RE11282.hyp FTFYFAQKVTMSITLDFNGKNFAKGKNLDVHYLPAKIDGDGEANVKNYFN NYTREATEFGTGILTNALRGFPLMGEKLKVPEGYCGLVLQETEKPISDTS DRKLRLTGVFQDFTYWNYDKVPSNGDPYRQALPLPDVAQALSQPISEEDL EKEIARNKENVKEST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30105-PA | 155 | CG30105-PA | 1..155 | 11..165 | 817 | 100 | Plus |
Translation from 31 to 498
> RE11282.pep MSITLDFNGKNFAKGKNLDVHYLPAKIDGDGEANVKNYFNNYTREATEFG TGILTNALRGFPLMGEKLKVPEGYCGLVLQETEKPISDTSDRKLRLTGVF QDFTYWNYDKVPSNGDPYRQALPLPDVAQALSQPISEEDLEKEIARNKEN VKEST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13241-PA | 155 | GF13241-PA | 1..154 | 1..154 | 680 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21037-PA | 155 | GG21037-PA | 1..154 | 1..154 | 688 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21812-PA | 153 | GH21812-PA | 1..152 | 1..154 | 492 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30105-PA | 155 | CG30105-PA | 1..155 | 1..155 | 817 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20785-PA | 153 | GI20785-PA | 1..153 | 1..155 | 471 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17686-PA | 156 | GL17686-PA | 1..154 | 1..154 | 643 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15653-PA | 156 | GA15653-PA | 1..154 | 1..154 | 642 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19965-PA | 155 | GM19965-PA | 1..154 | 1..154 | 744 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25458-PA | 155 | GD25458-PA | 1..154 | 1..154 | 753 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20519-PA | 154 | GJ20519-PA | 1..153 | 1..155 | 491 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10666-PA | 156 | GK10666-PA | 1..156 | 1..155 | 552 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13980-PA | 155 | GE13980-PA | 1..154 | 1..154 | 701 | 85.7 | Plus |