BDGP Sequence Production Resources |
Search the DGRC for RE11283
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 112 |
Well: | 83 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Cpr100A-RA |
Protein status: | RE11283.pep: gold |
Preliminary Size: | 849 |
Sequenced Size: | 1391 |
Gene | Date | Evidence |
---|---|---|
CG12045 | 2001-12-12 | Blastp of sequenced clone |
CG12045 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12045 | 2003-01-01 | Sim4 clustering to Release 3 |
Cpr100A | 2008-04-29 | Release 5.5 accounting |
Cpr100A | 2008-08-15 | Release 5.9 accounting |
Cpr100A | 2008-12-18 | 5.12 accounting |
1391 bp (1391 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070569
> RE11283.complete TGAGGCAGTTAACTCCACAAATCCGTTGCCGTCGGTCCCATTTCCCTCTT AACCGACTTGTAAGCGTAAAGGCGCGTGTGAATCCCCCTCGAGAAGAAGA TAAAATTGTGTGCAGTTTACGCTTGACAAGGATATTCCCCACACCAAAAT GTTCAGATTTCTTGCACTGACCACCTTGGTGGCCCTGGCTTCCAGCCAGC ACTATCACCAGGATCCCAAAACGGCGGCCATCATCAGTGAGCAGCGTTAT CTGTCCGGAGATGGAAAGTTCGGAGCTGCCTATGAGCAGGAGGATGGCAT CAACTTCAAGGAGGAGACGGATGCGGATGGAACACGTCATGGCAGCTACA GCTATCTGGATCCCACGGGCCAGAGGCGTACTATTTCGTACACAGCTGGC AAAAATGGTTTCCAAGCTTCTGGAGATCACTTGCCCCAGGCACCACCTGC TCCACCACAGCCCGTGCCCACAGCGGGATATCAGCCACAGCAGCAGTACC AGCCGCAGCAGTACCAGGCTCCCGCTCCCCAGCCGCAGGCCAGTTTCCGC AGCAATGACTACGGAGATGATGGTTCCTACGATCCCCGCTACAACGATCC CTCTTTCGGACAGAACCAGCAGAGCTACCAGCAGCCCGCTGCCCAGCCGC AGTACCGTCCTGCTCCCCAGCCCGCCTACAACCCACAGCCCGTGCAGCCG CAGCAGCAGTACCAGCCTCAGTATCAGCAGCCCCAACCCCAGTATCAGCA GCCGCAACCCCAGCAGGCGTACTACACCACCACCACCCCCAACCCACACC GCTTTTCGCCACCCGGCAAACTGTCCCTGAACCGCACGCCCGATGGCTTC ACCTACTCCTTCAACAAGGTATAAGCCCCACTGTCCTCCACTCAGACATT ATGCATCTTCTTCATTAGTAGGGATCCTCTTTCTTCTTTTCCAACTTTCC CTATCACAACTAGAACCCCTACTCTTTTCTTGACTCCATCAAACTCTCGT GTGATATGTTTAAGAGCAATTGTATCGTACTTCCTATATGCGTACTGTTT GTTATTAATTTATAATCCTACACAGAGAAAATTAATCGCTGCTGCCCAAT GGGTATTGCTGATTTAAATTACAAAATATATTCAAAATATCATTTGCATA TTTTTGAAATATGAAAAAACTCAAGAAATGTCGGCCTTTTTCTCTGTGAC TTTCCCATTAAACTTTAATCTTTCCATTTAAGTCTTCCCAAGAAAAGAGA AGTCAATAAACTTCGATGATGTTGAAAAATGATCAAAATTAATTTAGAAA CTATGTTAATTTGGGCCTTGGGACGTCTGAGCAATTTGTACTATAATCGA GTAAAAACAATATATGAAGGAAACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr100A-RA | 1465 | Cpr100A-RA | 91..1465 | 3..1377 | 6875 | 100 | Plus |
Cpr100A.b | 2207 | Cpr100A.b | 245..1619 | 3..1377 | 6875 | 100 | Plus |
Cpr100A.a | 1264 | Cpr100A.a | 522..1264 | 635..1377 | 3700 | 99.8 | Plus |
Cpr100A.a | 1264 | Cpr100A.a | 4..539 | 3..538 | 2680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26690649..26691621 | 403..1375 | 4745 | 99.2 | Plus |
chr3R | 27901430 | chr3R | 26690344..26690591 | 161..408 | 1240 | 100 | Plus |
chr3R | 27901430 | chr3R | 26689963..26690120 | 3..160 | 760 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30868212..30869186 | 403..1377 | 4860 | 99.9 | Plus |
3R | 32079331 | 3R | 30867907..30868154 | 161..408 | 1240 | 100 | Plus |
3R | 32079331 | 3R | 30867526..30867683 | 3..160 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30609043..30610017 | 403..1377 | 4860 | 99.8 | Plus |
3R | 31820162 | 3R | 30608738..30608985 | 161..408 | 1240 | 100 | Plus |
3R | 31820162 | 3R | 30608357..30608514 | 3..160 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 1354..1405 | 748..800 | 118 | 76.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6968..7060 | 470..561 | 111 | 59.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26690655..26690887 | 409..641 | 99 | == | Plus |
chr3R | 26689960..26690120 | 1..160 | 97 | -> | Plus |
chr3R | 26690344..26690591 | 161..408 | 100 | -> | Plus |
chr3R | 26691011..26691621 | 765..1375 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 1..726 | 149..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 1..726 | 149..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 1..726 | 149..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 1..726 | 149..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 1..726 | 149..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 2..1376 | 2..1375 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 2..1376 | 2..1375 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 3..1378 | 1..1375 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 2..1376 | 2..1375 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr100A-RA | 3..1378 | 1..1375 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30867523..30867683 | 1..160 | 98 | -> | Plus |
3R | 30867907..30868154 | 161..408 | 100 | -> | Plus |
3R | 30868218..30869184 | 409..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30867523..30867683 | 1..160 | 98 | -> | Plus |
3R | 30867907..30868154 | 161..408 | 100 | -> | Plus |
3R | 30868218..30869184 | 409..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30867523..30867683 | 1..160 | 98 | -> | Plus |
3R | 30867907..30868154 | 161..408 | 100 | -> | Plus |
3R | 30868218..30869184 | 409..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26693245..26693405 | 1..160 | 98 | -> | Plus |
arm_3R | 26693629..26693876 | 161..408 | 100 | -> | Plus |
arm_3R | 26693940..26694906 | 409..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30608738..30608985 | 161..408 | 100 | -> | Plus |
3R | 30609049..30610015 | 409..1375 | 100 | Plus | |
3R | 30608354..30608514 | 1..160 | 98 | -> | Plus |
Translation from 148 to 873
> RE11283.pep MFRFLALTTLVALASSQHYHQDPKTAAIISEQRYLSGDGKFGAAYEQEDG INFKEETDADGTRHGSYSYLDPTGQRRTISYTAGKNGFQASGDHLPQAPP APPQPVPTAGYQPQQQYQPQQYQAPAPQPQASFRSNDYGDDGSYDPRYND PSFGQNQQSYQQPAAQPQYRPAPQPAYNPQPVQPQQQYQPQYQQPQPQYQ QPQPQQAYYTTTTPNPHRFSPPGKLSLNRTPDGFTYSFNKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22928-PA | 233 | GF22928-PA | 1..233 | 1..241 | 831 | 85.9 | Plus |
Dana\GF10274-PA | 119 | GF10274-PA | 26..102 | 27..102 | 141 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11782-PA | 239 | GG11782-PA | 1..239 | 1..241 | 807 | 86.6 | Plus |
Dere\GG13245-PA | 121 | GG13245-PA | 1..99 | 1..102 | 154 | 30.4 | Plus |
Dere\GG20294-PA | 126 | GG20294-PA | 1..113 | 2..111 | 145 | 32.2 | Plus |
Dere\GG16171-PA | 119 | GG16171-PA | 24..119 | 24..120 | 138 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14220-PA | 239 | GH14220-PA | 1..239 | 1..241 | 789 | 77.6 | Plus |
Dgri\GH16160-PA | 120 | GH16160-PA | 1..99 | 1..102 | 153 | 30.4 | Plus |
Dgri\GH20994-PA | 124 | GH20994-PA | 1..103 | 1..102 | 137 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr100A-PA | 241 | CG12045-PA | 1..241 | 1..241 | 1324 | 100 | Plus |
Cpr97Eb-PA | 235 | CG15884-PA | 12..206 | 10..208 | 214 | 34.6 | Plus |
Cpr97Ea-PB | 363 | CG6131-PB | 35..230 | 5..206 | 214 | 32.1 | Plus |
Cpr97Ea-PA | 366 | CG6131-PA | 38..233 | 5..206 | 214 | 32.1 | Plus |
Cpr47Ee-PA | 369 | CG13222-PA | 99..340 | 20..210 | 180 | 28.4 | Plus |
CG43897-PK | 502 | CG43897-PK | 172..357 | 75..222 | 167 | 31.4 | Plus |
CG43897-PL | 500 | CG43897-PL | 172..355 | 75..222 | 165 | 30.5 | Plus |
CG15021-PA | 420 | CG15021-PA | 75..203 | 96..231 | 164 | 34.6 | Plus |
CG43897-PR | 446 | CG43897-PR | 117..301 | 75..222 | 164 | 30.3 | Plus |
CG43897-PA | 462 | CG43897-PA | 133..317 | 75..222 | 164 | 30.3 | Plus |
CG43897-PJ | 501 | CG43897-PJ | 172..356 | 75..222 | 164 | 30.3 | Plus |
CG43897-PC | 501 | CG43897-PC | 172..356 | 75..222 | 164 | 30.3 | Plus |
CG43897-PB | 501 | CG43897-PB | 172..356 | 75..222 | 164 | 30.3 | Plus |
CG10543-PD | 1631 | CG10543-PD | 1215..1335 | 94..216 | 162 | 32.5 | Plus |
CG10543-PE | 1634 | CG10543-PE | 1218..1338 | 94..216 | 162 | 32.5 | Plus |
CG10543-PA | 1634 | CG10543-PA | 1218..1338 | 94..216 | 162 | 32.5 | Plus |
CG10543-PF | 1635 | CG10543-PF | 1219..1339 | 94..216 | 162 | 32.5 | Plus |
Cpr49Aa-PB | 144 | CG30045-PB | 10..136 | 6..119 | 161 | 37.8 | Plus |
Edg78E-PB | 122 | CG7673-PB | 1..99 | 1..102 | 158 | 30.4 | Plus |
Edg78E-PA | 122 | CG7673-PA | 1..99 | 1..102 | 158 | 30.4 | Plus |
Cpr78Cc-PA | 119 | CG7658-PA | 1..119 | 1..119 | 155 | 34.7 | Plus |
CG15021-PA | 420 | CG15021-PA | 147..288 | 96..230 | 155 | 32.2 | Plus |
CG15021-PA | 420 | CG15021-PA | 99..226 | 97..222 | 152 | 36.4 | Plus |
Cpr49Ae-PA | 134 | CG8505-PA | 29..116 | 27..103 | 150 | 40.9 | Plus |
Cpr49Ah-PA | 190 | CG8515-PA | 39..160 | 18..121 | 149 | 33.3 | Plus |
CG44085-PM | 864 | CG44085-PM | 165..298 | 83..220 | 149 | 31.7 | Plus |
CG44085-PO | 2381 | CG44085-PO | 165..298 | 83..220 | 149 | 31.7 | Plus |
Cpr49Af-PB | 126 | CG8510-PB | 2..126 | 3..123 | 148 | 31.5 | Plus |
Cpr49Af-PA | 126 | CG8510-PA | 2..126 | 3..123 | 148 | 31.5 | Plus |
Cpr67Fa1-PA | 134 | CG7941-PA | 1..128 | 1..126 | 143 | 29.7 | Plus |
Cpr67Fa2-PA | 134 | CG18349-PA | 1..128 | 1..126 | 141 | 29.7 | Plus |
Lcp2-PB | 126 | CG8697-PB | 1..103 | 1..102 | 140 | 29.8 | Plus |
Lcp2-PA | 126 | CG8697-PA | 1..103 | 1..102 | 140 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22126-PA | 233 | GI22126-PA | 1..233 | 1..241 | 732 | 82.2 | Plus |
Dmoj\GI13312-PA | 120 | GI13312-PA | 1..99 | 1..102 | 155 | 32.4 | Plus |
Dmoj\GI12010-PA | 117 | GI12010-PA | 1..105 | 1..106 | 154 | 35.5 | Plus |
Dmoj\GI20905-PA | 121 | GI20905-PA | 1..100 | 1..102 | 153 | 32.4 | Plus |
Dmoj\GI20904-PA | 119 | GI20904-PA | 1..100 | 1..102 | 148 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13522-PA | 253 | GL13522-PA | 1..234 | 1..230 | 759 | 80.9 | Plus |
Dper\GL24679-PA | 120 | GL24679-PA | 1..106 | 1..106 | 168 | 35.5 | Plus |
Dper\GL24590-PA | 121 | GL24590-PA | 1..99 | 1..102 | 156 | 31.4 | Plus |
Dper\GL24678-PA | 119 | GL24678-PA | 1..102 | 1..102 | 146 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11357-PA | 244 | GA11357-PA | 1..244 | 1..241 | 792 | 83.5 | Plus |
Dpse\GA20507-PA | 120 | GA20507-PA | 1..106 | 1..106 | 165 | 35.5 | Plus |
Dpse\GA20516-PA | 121 | GA20516-PA | 1..99 | 1..102 | 153 | 30.4 | Plus |
Dpse\GA23947-PA | 119 | GA23947-PA | 1..102 | 1..102 | 146 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12910-PA | 241 | GM12910-PA | 1..241 | 1..241 | 1201 | 99.6 | Plus |
Dsec\GM22150-PA | 122 | GM22150-PA | 1..99 | 1..102 | 155 | 30.4 | Plus |
Dsec\GM20688-PA | 126 | GM20688-PA | 1..103 | 1..102 | 142 | 29.8 | Plus |
Dsec\GM22355-PA | 120 | GM22355-PA | 18..111 | 19..111 | 140 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15195-PA | 241 | GD15195-PA | 1..241 | 1..241 | 1201 | 99.6 | Plus |
Dsim\GD12126-PA | 122 | GD12126-PA | 1..99 | 1..102 | 155 | 30.4 | Plus |
Dsim\GD14949-PA | 120 | GD14949-PA | 18..102 | 19..102 | 140 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24247-PA | 236 | GJ24247-PA | 1..236 | 1..241 | 696 | 82.4 | Plus |
Dvir\GJ12082-PA | 120 | GJ12082-PA | 1..99 | 1..102 | 164 | 33.3 | Plus |
Dvir\GJ21116-PA | 156 | GJ21116-PA | 22..147 | 1..130 | 152 | 29.2 | Plus |
Dvir\GJ20634-PA | 126 | GJ20634-PA | 1..105 | 1..104 | 151 | 33.3 | Plus |
Dvir\GJ13281-PA | 119 | GJ13281-PA | 1..110 | 1..111 | 145 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14160-PA | 235 | GK14160-PA | 1..235 | 1..241 | 818 | 85.3 | Plus |
Dwil\GK20425-PA | 121 | GK20425-PA | 1..99 | 1..102 | 158 | 32.4 | Plus |
Dwil\GK20466-PA | 121 | GK20466-PA | 2..103 | 1..102 | 155 | 34 | Plus |
Dwil\GK22932-PA | 134 | GK22932-PA | 28..129 | 26..119 | 145 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10908-PA | 235 | GE10908-PA | 1..235 | 1..241 | 831 | 90.5 | Plus |
Dyak\GE22345-PA | 121 | GE22345-PA | 1..99 | 1..102 | 154 | 30.4 | Plus |
Dyak\GE12454-PA | 126 | GE12454-PA | 1..113 | 2..111 | 146 | 33.1 | Plus |
Dyak\GE22714-PA | 120 | GE22714-PA | 4..98 | 5..102 | 138 | 30.6 | Plus |
Translation from 148 to 873
> RE11283.hyp MFRFLALTTLVALASSQHYHQDPKTAAIISEQRYLSGDGKFGAAYEQEDG INFKEETDADGTRHGSYSYLDPTGQRRTISYTAGKNGFQASGDHLPQAPP APPQPVPTAGYQPQQQYQPQQYQAPAPQPQASFRSNDYGDDGSYDPRYND PSFGQNQQSYQQPAAQPQYRPAPQPAYNPQPVQPQQQYQPQYQQPQPQYQ QPQPQQAYYTTTTPNPHRFSPPGKLSLNRTPDGFTYSFNKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr100A-PA | 241 | CG12045-PA | 1..241 | 1..241 | 1324 | 100 | Plus |
Cpr97Eb-PA | 235 | CG15884-PA | 12..206 | 10..208 | 214 | 34.6 | Plus |
Cpr97Ea-PB | 363 | CG6131-PB | 35..230 | 5..206 | 214 | 32.1 | Plus |
Cpr97Ea-PA | 366 | CG6131-PA | 38..233 | 5..206 | 214 | 32.1 | Plus |
Cpr47Ee-PA | 369 | CG13222-PA | 99..340 | 20..210 | 180 | 28.4 | Plus |