Clone RE11315 Report

Search the DGRC for RE11315

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:113
Well:15
Vector:pFlc-1
Associated Gene/TranscriptCG11380-RA
Protein status:RE11315.pep: gold
Preliminary Size:1701
Sequenced Size:2714

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11380 2001-12-12 Blastp of sequenced clone
CG11380 2002-01-01 Sim4 clustering to Release 2
CG11380 2003-01-01 Sim4 clustering to Release 3
CG11380 2008-04-29 Release 5.5 accounting
CG11380 2008-08-15 Release 5.9 accounting
CG11380 2008-12-18 5.12 accounting

Clone Sequence Records

RE11315.complete Sequence

2714 bp (2714 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070570

> RE11315.complete
AGTAAGAGGCGCGACTTTTGAACGCTAGCACCGCTCCGATTCAGATTCCG
ACTACGAATCTGAGACGAAAATCAAAACCAAATTCGTATAGACACTATAA
CCAACATAACTTAAACCCACCAGCCCGGCCGTGTACCCTTGGTATTTTTT
GTTTTTGTGGTTCTCGAAGACACAAATGTATTGAAAAGTGCATATATTAT
TACATATAACATATAACGTCAATATCAAATTCGGATTTTGTGAAAAAGTC
GCTGTGCATGCGCATTGATACCTGGAATCGCCATGAGATTAGCGTTAATA
TTGGGCACTCTTAGTGCTATAGTGTGCTTGGCCAGCAGCTTGAGCCAGTC
AGAGGCGAGTGGCTCAAAGGGCAATGGATTTCCCAAAAAGGTTACCACCC
TGAAGAAGCGACCAACAAAAACGCCGACCACAGTTCCGATTTCCATCAGC
AGAGCAACCACTTTGAAGCCCAGTAAGCCACGCGTGAAGATCGGCACATC
GGCAACCACCAAGAGCCCCACGAAAGCACCGGCCTTAACCGAGACATTTG
GCAATCTGCCGGCGGATGACCTGGAATTCATTAAGGAGCTGGACAAGCAG
TTCAAACTGCACGGAAACAAGATCAAGATCAAGGTGGAGAGGGATAATTC
CACGAGTAGCGGCGGCAAGAACAGCAAGAGGACCATCGAGGGGGATTTGG
GATACGGCTACTCGCATCCTGGCTATGATTACACGCCGCCCAAGTTCATG
TTCTATCCATACTCACAGCATGATATTCCCTCGGGCTTTGCCCTTCCACA
GCCACATCCGGAGGAGCAGGAGGAGGAGGCACACCAGCCGGCAATGCAAC
ATCATCACAATCACGAGCAAGTGACCAGCGTGACCATTGAGCCCTCGTAC
TCCTACGAGCTTAAGCCCCAGACCAGCTATGAAACCCAACCGCAGCACAC
AGCTCCCGAGCAGCCGCAGATTGATCTGCCCCAGGATGAAGCGGAAAGTC
CCAGTGGTGCAGGTGGTTCCAGTGGCCACGGGGGATATCAGGAGCCCGTC
ATTGTCTTGCGTATTCCAGGACCCGCCAAGTACGCCGCCCATTTGCAGAC
CCTTCTCCAGCAATATCTGGAGATCAGAGCGGCCCAGTACCTCAGCTTGC
TCCAGGAGGCCGATCAGCAGCAACAACAACAGCAGCATCAGCATGTGGAT
CCTTCGCAGCAATATGGACCACCAGAACCGGCCACCTACCATCAGGAAGT
CAGCTACGCCCACCAACTGGCACCCACGCCGGCACCCGTCCAGTACGCAC
CCATCGATGATGTCTACCAGAGCTACAAGGGTCGCCACCAGCAACAGCTG
CAGCTGCAGCAGCAACAATATGAGCCGCAACAATACTACGCGCCCATGGA
CTACCAGCAGCCCACACAGTTCTACTACGCTCAGCCCCAATCCCATTTGC
AGCAGCAGCCTCAGCTCTATCTGATAGCAATGGCCCAGCCGGAAACGGAA
CCGGAGCCGCAACCACAGCAGCACCATCATCAGCAGCACCATCATCATCT
TCAGCAGCAGCAGCAGCAGCAGCAACCAATATACGTTCCAGAATCTGATC
CACCGACGGGTCCTTCAGGTGGTCCTGAACAGGAACCGGAGGCGGACCAC
AGCCTTCCCATAACGGAAAACAACCCACGACCCACCCACACCAAGGTCAT
TTTTAATCCGTACCCCTACCAGCAGCAGCAGCATCAACCGCAACAGCAGA
CCACCAACATCGAGGAGCACCAGCACCAGCCTGAGGGCGAACGCCCCTTC
AACTACCACGCCCATGCGATCAAGATGCGCCAGGGCAAAAGGGCGGCCAA
GCCGGAACCCGCGGATGGGGACGTGGGTCCCAGTTCGGGCGACAAGGGAC
TCCAACAGATCAGGGAGTATGTGAGGGAGAAACTGGGCGCTGAAATGGGT
TCGGCTGTCGAATACAAGACGACACAGCTGCTCGAGGGCTGAGGTCTGGA
TAAATGTTCAGATGTTCGAAGGCATGGAAACTCATTTGACCGAACGCACT
ATCTCTGCCTGGATGAACTAAACCAATTTTTAAACTTGGCAATCTTCAAA
CGATTTTATCAAAGGTTTTTTCGGATGCCTTAGAATTCTAGAATTAAATT
TTAAATCGCTTACGCACGTTTTCTATGTATATATCCAGGCAAGCCATCTT
TAAAACAAATTCAAACATCCGTACATTATGAATATGGGGATCAAGTCCAG
CAAGACAGTAAAATTCCAGTGAGTGCCATGCCCACGTTCACTCGTATTCT
TAACACACAATTTGTGGTTGCTTCTTGTGCCTGATATCCGCTCATTAGTA
TTTATTCCAAGCTAGAGGAGCAGAACGATCCCGGGGTGATCCTCCAGCTC
CAAATCTCATCCAACACCTACCCGCAATCCCTGAGCTACACAGCCAAGGC
ATACTTTTGGCCGGAAAAGAGGGCGCCTAAAGATAGGCATAGTTTTCTTT
TCTTAGCGAAGAGGTGCTGCCGGGACACATTCGCTTTTCATTATTTTGTA
CGACGTTTTTTTTTATGTTGTTTATATTGTTAACCAAGAAAATGTGCTGC
TGATCATGTGTGCAATATTTAGTCTTAATGTGCTTCTTGATTTACCTATA
TTATGTACTTGTATTTTTGTATGATTAAACCGAAAAGAAATTAATTTGAA
AAAAAAAAAAAAAA

RE11315.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:49:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11380-RA 2790 CG11380-RA 81..2782 1..2702 13495 99.9 Plus
CG11380.b 3079 CG11380.b 370..3071 1..2702 13495 99.9 Plus
CG11380.a 2648 CG11380.a 389..2640 451..2702 11260 100 Plus
CG11380.a 2648 CG11380.a 1..390 1..390 1935 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1088639..1090636 701..2698 9975 99.9 Plus
chrX 22417052 chrX 1088173..1088571 303..701 1980 99.7 Plus
chrX 22417052 chrX 1085387..1085690 1..304 1505 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:33:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1194663..1196664 701..2702 10010 100 Plus
X 23542271 X 1194197..1194595 303..701 1995 100 Plus
X 23542271 X 1191411..1191714 1..304 1505 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1202761..1204762 701..2702 10010 100 Plus
X 23527363 X 1202295..1202693 303..701 1995 100 Plus
X 23527363 X 1199509..1199812 1..304 1505 99.6 Plus
3R 31820162 3R 22364242..22364294 1574..1522 190 90.5 Minus
Blast to na_te.dros performed 2019-03-15 14:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2458..2868 1163..1576 307 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2418..2868 1314..1792 294 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2410..2838 1163..1573 282 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2678 1450..1792 265 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2527 1353..1581 245 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2337..3012 1108..1776 243 54.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2632..2999 1163..1557 236 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2329..2542 1163..1382 218 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2589..2994 1162..1584 218 55.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2337..2563 1336..1555 208 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2910 1163..1780 203 55.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6944 1340..1570 196 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..7219 1163..1593 191 55.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6956 1163..1378 187 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6923 1163..1375 186 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..7011 1336..1583 185 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..7055 1163..1459 167 55.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2772..3004 1143..1379 165 56.2 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3226..3375 1430..1583 159 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6808..7076 1139..1411 156 54.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6818..7058 1317..1564 154 55.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3219..3348 1453..1579 147 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1531..1585 1328..1382 140 72.7 Plus
roo 9092 roo DM_ROO 9092bp 1065..1164 1163..1268 136 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2806..2855 1163..1212 133 74 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1517..1564 1335..1382 132 75 Plus
roo 9092 roo DM_ROO 9092bp 1106..1153 1336..1383 132 75 Plus
roo 9092 roo DM_ROO 9092bp 1095..1140 1337..1382 131 76.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2633..2964 1149..1465 129 55.6 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 970..1046 1172..1248 124 62.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 971..1011 1335..1375 124 78 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1603 1168..1248 121 64 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3217..3307 1103..1193 121 63.4 Plus
roo 9092 roo DM_ROO 9092bp 1118..1152 1336..1370 121 82.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1555..1585 1163..1193 119 87.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1539..1567 1165..1193 118 89.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2442..2515 796..872 117 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1556..1587 1161..1192 115 84.4 Plus

RE11315.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:03:36 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1085387..1085689 1..303 99 -> Plus
chrX 1088174..1088571 304..701 99 -> Plus
chrX 1088640..1089453 702..1515 94 == Plus
chrX 1089513..1089657 1575..1719 100 == Plus
chrX 1089719..1090636 1781..2698 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:53:59 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..1710 283..1992 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:17:38 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..1710 283..1992 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:16:06 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..1710 283..1992 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:43:44 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..1710 283..1992 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:48:05 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..1710 283..1992 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:50:21 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..2698 1..2698 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:17:38 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..2698 1..2698 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:16:06 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 7..2704 1..2698 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:43:45 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 1..2698 1..2698 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:48:05 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
CG11380-RA 7..2704 1..2698 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:36 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
X 1191411..1191713 1..303 99 -> Plus
X 1194198..1194595 304..701 100 -> Plus
X 1194664..1196660 702..2698 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:36 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
X 1191411..1191713 1..303 99 -> Plus
X 1194198..1194595 304..701 100 -> Plus
X 1194664..1196660 702..2698 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:36 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
X 1191411..1191713 1..303 99 -> Plus
X 1194198..1194595 304..701 100 -> Plus
X 1194664..1196660 702..2698 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:16:06 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1085444..1085746 1..303 99 -> Plus
arm_X 1088231..1088628 304..701 100 -> Plus
arm_X 1088697..1090693 702..2698 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:19:55 Download gff for RE11315.complete
Subject Subject Range Query Range Percent Splice Strand
X 1199509..1199811 1..303 99 -> Plus
X 1202296..1202693 304..701 100 -> Plus
X 1202762..1204758 702..2698 100   Plus

RE11315.pep Sequence

Translation from 282 to 1991

> RE11315.pep
MRLALILGTLSAIVCLASSLSQSEASGSKGNGFPKKVTTLKKRPTKTPTT
VPISISRATTLKPSKPRVKIGTSATTKSPTKAPALTETFGNLPADDLEFI
KELDKQFKLHGNKIKIKVERDNSTSSGGKNSKRTIEGDLGYGYSHPGYDY
TPPKFMFYPYSQHDIPSGFALPQPHPEEQEEEAHQPAMQHHHNHEQVTSV
TIEPSYSYELKPQTSYETQPQHTAPEQPQIDLPQDEAESPSGAGGSSGHG
GYQEPVIVLRIPGPAKYAAHLQTLLQQYLEIRAAQYLSLLQEADQQQQQQ
QHQHVDPSQQYGPPEPATYHQEVSYAHQLAPTPAPVQYAPIDDVYQSYKG
RHQQQLQLQQQQYEPQQYYAPMDYQQPTQFYYAQPQSHLQQQPQLYLIAM
AQPETEPEPQPQQHHHQQHHHHLQQQQQQQQPIYVPESDPPTGPSGGPEQ
EPEADHSLPITENNPRPTHTKVIFNPYPYQQQQHQPQQQTTNIEEHQHQP
EGERPFNYHAHAIKMRQGKRAAKPEPADGDVGPSSGDKGLQQIREYVREK
LGAEMGSAVEYKTTQLLEG*

RE11315.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22140-PA 576 GF22140-PA 1..576 1..569 1835 74.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:05:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12834-PA 565 GG12834-PA 1..565 1..569 2277 90.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12002-PA 618 GH12002-PA 1..618 1..569 1377 53.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11380-PB 569 CG11380-PB 1..569 1..569 3056 100 Plus
CG11380-PA 569 CG11380-PA 1..569 1..569 3056 100 Plus
Ptip-PA 2294 CG32133-PA 364..734 152..505 210 23.9 Plus
Ptip-PA 2294 CG32133-PA 203..541 170..517 209 26.5 Plus
Smr-PG 3607 CG4013-PG 52..405 174..539 209 24 Plus
Lasp-PC 636 CG3849-PC 154..339 273..492 208 33.2 Plus
Lasp-PB 657 CG3849-PB 175..360 273..492 208 33.2 Plus
Smr-PF 3601 CG4013-PF 52..399 174..539 205 23.7 Plus
Smr-PE 3601 CG4013-PE 52..399 174..539 205 23.7 Plus
Smr-PD 3601 CG4013-PD 52..399 174..539 205 23.7 Plus
Ptip-PA 2294 CG32133-PA 621..999 186..522 200 25.5 Plus
Ptip-PA 2294 CG32133-PA 833..1135 172..501 200 25.6 Plus
Atx2-PA 888 CG5166-PA 466..722 244..493 198 28.5 Plus
Atx2-PD 1023 CG5166-PD 466..722 244..493 198 28.5 Plus
Atx2-PC 1023 CG5166-PC 466..722 244..493 198 28.5 Plus
Atx2-PB 1084 CG5166-PB 527..783 244..493 198 28.5 Plus
Wnk-PO 2243 CG7177-PO 840..1178 172..505 197 27.5 Plus
Wnk-PN 2441 CG7177-PN 1038..1376 172..505 197 27.5 Plus
Wnk-PL 2441 CG7177-PL 1038..1376 172..505 197 27.5 Plus
Wnk-PM 2462 CG7177-PM 1038..1376 172..505 197 27.5 Plus
velo-PC 1833 CG10107-PC 78..362 213..516 195 27.6 Plus
velo-PA 1833 CG10107-PA 78..362 213..516 195 27.6 Plus
Ptip-PA 2294 CG32133-PA 973..1386 162..521 193 24.2 Plus
CG10543-PD 1631 CG10543-PD 1077..1329 288..557 193 26 Plus
CG10543-PE 1634 CG10543-PE 1080..1332 288..557 193 26 Plus
CG10543-PA 1634 CG10543-PA 1080..1332 288..557 193 26 Plus
CG10543-PF 1635 CG10543-PF 1081..1333 288..557 193 26 Plus
Wnk-PO 2243 CG7177-PO 789..1163 179..535 192 25.6 Plus
Wnk-PN 2441 CG7177-PN 987..1361 179..535 192 25.6 Plus
Wnk-PL 2441 CG7177-PL 987..1361 179..535 192 25.6 Plus
Wnk-PM 2462 CG7177-PM 987..1361 179..535 192 25.6 Plus
CG15322-PC 740 CG15322-PC 167..468 176..501 189 27.6 Plus
CG15322-PB 740 CG15322-PB 167..468 176..501 189 27.6 Plus
CG15740-PB 975 CG15740-PB 168..518 174..499 185 26.3 Plus
CG10543-PD 1631 CG10543-PD 1172..1449 160..509 184 24.6 Plus
CG10543-PE 1634 CG10543-PE 1175..1452 160..509 184 24.6 Plus
CG10543-PA 1634 CG10543-PA 1175..1452 160..509 184 24.6 Plus
CG10543-PF 1635 CG10543-PF 1176..1453 160..509 184 24.6 Plus
Ncoa6-PC 2265 CG14023-PC 434..694 295..504 182 27.1 Plus
Ncoa6-PD 2266 CG14023-PD 435..695 295..504 182 27.1 Plus
Ncoa6-PF 2467 CG14023-PF 435..695 295..504 182 27.1 Plus
kis-PF 5191 CG3696-PF 183..562 172..520 180 24.4 Plus
kis-PE 5252 CG3696-PE 183..562 172..520 180 24.4 Plus
kis-PA 5322 CG3696-PA 183..562 172..520 180 24.4 Plus
kis-PD 5343 CG3696-PD 183..562 172..520 180 24.4 Plus
kis-PC 5517 CG3696-PC 183..562 172..520 180 24.4 Plus
CG15740-PB 975 CG15740-PB 238..590 144..468 178 25.1 Plus
CG10543-PD 1631 CG10543-PD 1016..1391 115..488 177 23.2 Plus
CG10543-PE 1634 CG10543-PE 1019..1394 115..488 177 23.2 Plus
CG10543-PA 1634 CG10543-PA 1019..1394 115..488 177 23.2 Plus
CG10543-PF 1635 CG10543-PF 1020..1395 115..488 177 23.2 Plus
kis-PF 5191 CG3696-PF 400..728 174..509 176 25.2 Plus
kis-PE 5252 CG3696-PE 400..728 174..509 176 25.2 Plus
kis-PA 5322 CG3696-PA 400..728 174..509 176 25.2 Plus
kis-PD 5343 CG3696-PD 400..728 174..509 176 25.2 Plus
kis-PC 5517 CG3696-PC 400..728 174..509 176 25.2 Plus
kto-PA 2531 CG8491-PA 1853..2205 181..499 175 23.4 Plus
NUCB1-PA 569 CG32190-PA 334..542 276..499 174 29.6 Plus
CG44085-PM 864 CG44085-PM 191..542 126..535 171 23.1 Plus
mld-PF 1896 CG34100-PF 1420..1634 295..497 171 30.5 Plus
mld-PE 1943 CG34100-PE 1420..1634 295..497 171 30.5 Plus
CG44085-PO 2381 CG44085-PO 191..542 126..535 171 23.1 Plus
velo-PC 1833 CG10107-PC 45..295 257..499 170 28.4 Plus
velo-PA 1833 CG10107-PA 45..295 257..499 170 28.4 Plus
kis-PF 5191 CG3696-PF 161..486 161..539 170 24.3 Plus
kis-PE 5252 CG3696-PE 161..486 161..539 170 24.3 Plus
kis-PA 5322 CG3696-PA 161..486 161..539 170 24.3 Plus
kis-PD 5343 CG3696-PD 161..486 161..539 170 24.3 Plus
kis-PC 5517 CG3696-PC 161..486 161..539 170 24.3 Plus
CG12964-PB 1129 CG12964-PB 332..638 180..508 169 24.7 Plus
CG12964-PC 1129 CG12964-PC 332..638 180..508 169 24.7 Plus
CG5674-PD 396 CG5674-PD 133..338 292..498 167 27.9 Plus
CG5674-PE 445 CG5674-PE 182..387 292..498 167 27.9 Plus
CG5674-PA 489 CG5674-PA 226..431 292..498 167 27.9 Plus
CG43333-PA 1166 CG32972-PB 53..354 162..499 166 26.4 Plus
kis-PF 5191 CG3696-PF 457..827 161..505 165 24.5 Plus
kis-PE 5252 CG3696-PE 457..827 161..505 165 24.5 Plus
kis-PA 5322 CG3696-PA 457..827 161..505 165 24.5 Plus
kis-PD 5343 CG3696-PD 457..827 161..505 165 24.5 Plus
kis-PC 5517 CG3696-PC 457..827 161..505 165 24.5 Plus
CG43897-PR 446 CG43897-PR 35..345 216..505 164 29.3 Plus
CG43897-PA 462 CG43897-PA 51..361 216..505 164 29.3 Plus
CG43897-PJ 501 CG43897-PJ 90..400 216..505 164 29.3 Plus
CG43897-PC 501 CG43897-PC 90..400 216..505 164 29.3 Plus
CG43897-PB 501 CG43897-PB 90..400 216..505 164 29.3 Plus
Smr-PG 3607 CG4013-PG 441..671 216..446 163 30.2 Plus
Smr-PF 3601 CG4013-PF 435..665 216..446 163 30.2 Plus
Smr-PE 3601 CG4013-PE 435..665 216..446 163 30.2 Plus
Smr-PD 3601 CG4013-PD 435..665 216..446 163 30.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:05:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15629-PA 612 GI15629-PA 1..612 1..569 1299 58.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:05:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14234-PA 596 GL14234-PA 1..596 1..569 1361 60.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:05:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10962-PA 632 GA10962-PA 1..632 1..569 1428 62.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:06:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19119-PA 565 GM19119-PA 1..565 1..569 2768 96.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16545-PA 547 GD16545-PA 11..547 8..569 2581 92.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15225-PA 575 GJ15225-PA 1..575 1..569 1385 59.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16362-PA 632 GK16362-PA 1..632 1..569 1257 51 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16668-PA 567 GE16668-PA 1..567 1..569 2173 89.2 Plus

RE11315.hyp Sequence

Translation from 282 to 1991

> RE11315.hyp
MRLALILGTLSAIVCLASSLSQSEASGSKGNGFPKKVTTLKKRPTKTPTT
VPISISRATTLKPSKPRVKIGTSATTKSPTKAPALTETFGNLPADDLEFI
KELDKQFKLHGNKIKIKVERDNSTSSGGKNSKRTIEGDLGYGYSHPGYDY
TPPKFMFYPYSQHDIPSGFALPQPHPEEQEEEAHQPAMQHHHNHEQVTSV
TIEPSYSYELKPQTSYETQPQHTAPEQPQIDLPQDEAESPSGAGGSSGHG
GYQEPVIVLRIPGPAKYAAHLQTLLQQYLEIRAAQYLSLLQEADQQQQQQ
QHQHVDPSQQYGPPEPATYHQEVSYAHQLAPTPAPVQYAPIDDVYQSYKG
RHQQQLQLQQQQYEPQQYYAPMDYQQPTQFYYAQPQSHLQQQPQLYLIAM
AQPETEPEPQPQQHHHQQHHHHLQQQQQQQQPIYVPESDPPTGPSGGPEQ
EPEADHSLPITENNPRPTHTKVIFNPYPYQQQQHQPQQQTTNIEEHQHQP
EGERPFNYHAHAIKMRQGKRAAKPEPADGDVGPSSGDKGLQQIREYVREK
LGAEMGSAVEYKTTQLLEG*

RE11315.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11380-PB 569 CG11380-PB 1..569 1..569 3056 100 Plus
CG11380-PA 569 CG11380-PA 1..569 1..569 3056 100 Plus
ptip-PA 2294 CG32133-PA 364..734 152..505 210 23.9 Plus
ptip-PA 2294 CG32133-PA 203..541 170..517 209 26.5 Plus
Lasp-PC 636 CG3849-PC 154..339 273..492 208 33.2 Plus
Lasp-PB 657 CG3849-PB 175..360 273..492 208 33.2 Plus
ptip-PA 2294 CG32133-PA 621..999 186..522 200 25.5 Plus
ptip-PA 2294 CG32133-PA 833..1135 172..501 200 25.6 Plus
ptip-PA 2294 CG32133-PA 973..1386 162..521 193 24.2 Plus