BDGP Sequence Production Resources |
Search the DGRC for RE11317
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 113 |
Well: | 17 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32982-RB |
Protein status: | RE11317.pep: gold |
Preliminary Size: | 276 |
Sequenced Size: | 2440 |
Gene | Date | Evidence |
---|---|---|
CG32982 | 2001-12-12 | Blastp of sequenced clone |
CG18566 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32982 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32982 | 2008-04-29 | Release 5.5 accounting |
CG32982 | 2008-08-15 | Release 5.9 accounting |
CG32982 | 2008-12-18 | 5.12 accounting |
2440 bp (2440 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070571
> RE11317.complete AATAGTCGTCAATGGAAGTTGGTACGTTTCGGTTCGAGCTGATCTTAGCC AAAGTGTTGCGTGCAGTGTTGAGTGTCAGTGAAACTCCATCGAAATTCCA ATAAAAACTAACCAATAACGAGTTATATAACAACTGTTGAAAAGATTTCT TTATGAAATTTTCAATCAACAGAAAACGAAATTTATTTAAAGTTCAATTT ACCTCAGTGCTAAATGATTTTTTCCACGGATTTGCATTGGCAATCCTTGC TGGCAGGACGCATTCCGGTGGCCTCCATGACAGGACCCATTAAACGCGGA CTGCTCTGGCAGCAAAGGGATCGGCTCTTCTCTCGCTGGAAGGAGCGATA CTTTGTGCTCACTCGTGACTACTTGCACTGCTTCAAAAGAGCCTCGGGAT CGGCCAATGAACGTGCCTCGGATATGGGACAGTTTATCTTCAAGGTCAAG CTGGTGGACGTGGAGAAGGTGGAGTGGCTGAATCGGCGCTCCTACAGCGC CATTGGTCTGCTACTGGGTCGCGAGGGTCGTGTTCTACTCCGCTGCGATG ATGGCCTCGAGGATTGGTTCGAGCTGCTGGAGGAATGCACAATGACCTCC AAGGAGCGCAGACGAGCCCTGAAGATTGCCCAAGGACCCAGATCCCGAGC CTCATTGGCTGCTCCCGTTTCGCATGCTTCGCTGCAGTTCCAGCATTTTG GACTCGGAGGCACTTACTCGAGTGCCCTGGACGATTGGCTGATGACGAAT GGAACCGGTGGTCTGGCCCGGCACAAGATTGGAGCTGGCAGTCTGAACGG TTATGGCGGGGCCAATCCCTTCCTGTTCTCCGATTCGGTGCCGGATCTGA GTGCCCTGAACAACGAAAACCACAATCATCACCTGAGCGGCATCAGCACG AACCACTCGACGCCGCAAAAGATACCGCACCACAGCAATGCGAATCTCAG TCGATACTCCAATGGATATGTCTCGGCCCAGAACAGTTTCACCCAAGCCG GAGCACTCTACGGATCGCCTAGGCGGATCTTTATCAACAGCAGCTTCGGT TCCAATCAGGTGGTGGATGAGGAGACCGAGGAGACGGAGGTTCAGCTGAG GAGACCCAGACTGTTCCGGGGAGTTAGCGCTACTCCGGATAATGGCAACG AACTGGACCGCGATTGGCTGTACCGGAAGCCAAGGGCGCCCACTGATATG AGGCACTCAGTTCAACCAATGTTACCCACTGGCGGCGGCAGCAACATCGG GCTGGCCAAAACCGAACTGGACTGTTCGGCCCATGATAGTGGCCTGGACA CGCCCCCATCGACGCACCGCCCCTCGAGCTACCGGGAGGCGAGCAGGGAC AGCACAGAGACCAATGGCAGTTCGTCGAGGGGAACACTGCTGAATAACTC ATCGCCAGGCGGCAGTTTTCGAGCCAAAAAGCTGAGCACCCAAGTAAGCA ATCTCAATCAGTTGAATTCCCTGAACGGATCGAGATACTCGGTGCAGGAT CAACGCATCTTGAAGATGCGCAACAACGAGGAGGATCGCTGTGCCTCCAT CAAGATGGCCAATCGTCTCAATCAGAATCAGGAGCAGGCCACTTACGATC CCAACCAGAATCGCTACTATAAGAACGGTAATGCCACGCCCCCCACATCA CTGACGCCACAGCATACGCCGCAGCACAAACTGACGATGATGCACTATGG CAATGGGAATGGGAACATGGGCACCCTGAATGGCAACACCAACGGATCGG ATCGCATAAACGGATCGGCCATTTTCCGGGAGCGCTACCAACATCCCGCC CTGGCCGCCATCATCAACGAAGCCCAGGGCCTTAAGTTTCGAGAAGAATC AGAAAATATGTGGTAAACATACCCAAAGCCCCAAATTGTGCATGTTACAC AAAGTGTCCAGCCGACTGGCCCCATAGTGCATGAGAAGATCGTGATGTTG AATGGACCAAAAGATATAGATAAAGCGATCCTTTCCCCAACTTGTAGAGC GGGCCTATTCGGACAGTCAGCAGCGTCGCCTCAACAACAACAATGGACCG ACTCCCCAACCAGCCTCGCCACTCGCCCAGCGCCGGAATAATGGTGGACT CGGATCCGGAGTCGGATCGGGGGCTATATATGGCACGCCCACGCGTGTAT AGCGCCTAAAGGTCTAAAGATAATCCAAATCGATGGAGAATTGATTGCTC CCCCACTAGTTTAATAATGATATAAATTAGTCGGTAAAGTAGTCGACTTG ATACAAAGTTTTGGAAATTATTTGCATAGAAAATACTTCAACGAAGGTAG AGAATAGTAACTAAATCTTAACTATGTAGTAGTACTCGTAGTGTGTGTGC TCCAATGTCCAGCTTTATGTAAATGTTTAAATAAAATATACATTAGTAAA AAGCATCTTAATAAAAGATAAAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32982-RB | 2483 | CG32982-RB | 63..2483 | 4..2424 | 12075 | 99.9 | Plus |
CG32982.g | 3474 | CG32982.g | 1096..3284 | 240..2428 | 10930 | 99.9 | Plus |
CG32982-RE | 3334 | CG32982-RE | 1142..3329 | 241..2428 | 10925 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9160992..9161626 | 1209..1843 | 3085 | 99.1 | Plus |
chr2L | 23010047 | chr2L | 9160300..9160929 | 581..1210 | 3015 | 98.6 | Plus |
chr2L | 23010047 | chr2L | 9162054..9162636 | 1842..2424 | 2780 | 98.5 | Plus |
chr2L | 23010047 | chr2L | 9150117..9150356 | 1..240 | 1185 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 9160046..9160186 | 443..583 | 705 | 100 | Plus |
chr2L | 23010047 | chr2L | 9153583..9153690 | 240..347 | 540 | 100 | Plus |
chr2L | 23010047 | chr2L | 9155403..9155502 | 347..446 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9162074..9162708 | 1209..1843 | 3175 | 100 | Plus |
2L | 23513712 | 2L | 9161383..9162012 | 581..1210 | 3150 | 100 | Plus |
2L | 23513712 | 2L | 9163139..9163725 | 1842..2428 | 2920 | 99.8 | Plus |
2L | 23513712 | 2L | 9151204..9151440 | 4..240 | 1170 | 99.6 | Plus |
2L | 23513712 | 2L | 9161129..9161269 | 443..583 | 705 | 100 | Plus |
2L | 23513712 | 2L | 9154658..9154765 | 240..347 | 540 | 100 | Plus |
2L | 23513712 | 2L | 9156497..9156596 | 347..446 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9162074..9162708 | 1209..1843 | 3175 | 100 | Plus |
2L | 23513712 | 2L | 9161383..9162012 | 581..1210 | 3150 | 100 | Plus |
2L | 23513712 | 2L | 9163139..9163725 | 1842..2428 | 2920 | 99.8 | Plus |
2L | 23513712 | 2L | 9151204..9151440 | 4..240 | 1170 | 99.5 | Plus |
2L | 23513712 | 2L | 9161129..9161269 | 443..583 | 705 | 100 | Plus |
2L | 23513712 | 2L | 9154658..9154765 | 240..347 | 540 | 100 | Plus |
2L | 23513712 | 2L | 9156497..9156596 | 347..446 | 500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9160048..9160185 | 445..582 | 100 | -> | Plus |
chr2L | 9150117..9150356 | 1..240 | 99 | -> | Plus |
chr2L | 9153584..9153690 | 241..347 | 100 | -> | Plus |
chr2L | 9155404..9155500 | 348..444 | 100 | -> | Plus |
chr2L | 9160302..9160929 | 583..1210 | 98 | -> | Plus |
chr2L | 9160994..9161626 | 1211..1843 | 99 | -> | Plus |
chr2L | 9162056..9162636 | 1844..2424 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..1653 | 214..1866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..1653 | 214..1866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..1653 | 214..1866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..1653 | 214..1866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..1653 | 214..1866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..2424 | 1..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..2424 | 1..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 3..2426 | 1..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 1..2424 | 1..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32982-RB | 3..2426 | 1..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9161131..9161268 | 445..582 | 100 | -> | Plus |
2L | 9151201..9151440 | 1..240 | 99 | -> | Plus |
2L | 9154659..9154765 | 241..347 | 100 | -> | Plus |
2L | 9156498..9156594 | 348..444 | 100 | -> | Plus |
2L | 9161385..9162012 | 583..1210 | 100 | -> | Plus |
2L | 9162076..9162708 | 1211..1843 | 100 | -> | Plus |
2L | 9163141..9163721 | 1844..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9161131..9161268 | 445..582 | 100 | -> | Plus |
2L | 9151201..9151440 | 1..240 | 99 | -> | Plus |
2L | 9154659..9154765 | 241..347 | 100 | -> | Plus |
2L | 9156498..9156594 | 348..444 | 100 | -> | Plus |
2L | 9161385..9162012 | 583..1210 | 100 | -> | Plus |
2L | 9162076..9162708 | 1211..1843 | 100 | -> | Plus |
2L | 9163141..9163721 | 1844..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9161131..9161268 | 445..582 | 100 | -> | Plus |
2L | 9151201..9151440 | 1..240 | 99 | -> | Plus |
2L | 9154659..9154765 | 241..347 | 100 | -> | Plus |
2L | 9156498..9156594 | 348..444 | 100 | -> | Plus |
2L | 9161385..9162012 | 583..1210 | 100 | -> | Plus |
2L | 9162076..9162708 | 1211..1843 | 100 | -> | Plus |
2L | 9163141..9163721 | 1844..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9151201..9151440 | 1..240 | 99 | -> | Plus |
arm_2L | 9154659..9154765 | 241..347 | 100 | -> | Plus |
arm_2L | 9156498..9156594 | 348..444 | 100 | -> | Plus |
arm_2L | 9161131..9161268 | 445..582 | 100 | -> | Plus |
arm_2L | 9161385..9162012 | 583..1210 | 100 | -> | Plus |
arm_2L | 9162076..9162708 | 1211..1843 | 100 | -> | Plus |
arm_2L | 9163141..9163721 | 1844..2424 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9151201..9151440 | 1..240 | 99 | -> | Plus |
2L | 9154659..9154765 | 241..347 | 100 | -> | Plus |
2L | 9156498..9156594 | 348..444 | 100 | -> | Plus |
2L | 9161131..9161268 | 445..582 | 100 | -> | Plus |
2L | 9161385..9162012 | 583..1210 | 100 | -> | Plus |
2L | 9162076..9162708 | 1211..1843 | 100 | -> | Plus |
2L | 9163141..9163721 | 1844..2424 | 99 | Plus |
Translation from 213 to 1865
> RE11317.pep MIFSTDLHWQSLLAGRIPVASMTGPIKRGLLWQQRDRLFSRWKERYFVLT RDYLHCFKRASGSANERASDMGQFIFKVKLVDVEKVEWLNRRSYSAIGLL LGREGRVLLRCDDGLEDWFELLEECTMTSKERRRALKIAQGPRSRASLAA PVSHASLQFQHFGLGGTYSSALDDWLMTNGTGGLARHKIGAGSLNGYGGA NPFLFSDSVPDLSALNNENHNHHLSGISTNHSTPQKIPHHSNANLSRYSN GYVSAQNSFTQAGALYGSPRRIFINSSFGSNQVVDEETEETEVQLRRPRL FRGVSATPDNGNELDRDWLYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKT ELDCSAHDSGLDTPPSTHRPSSYREASRDSTETNGSSSRGTLLNNSSPGG SFRAKKLSTQVSNLNQLNSLNGSRYSVQDQRILKMRNNEEDRCASIKMAN RLNQNQEQATYDPNQNRYYKNGNATPPTSLTPQHTPQHKLTMMHYGNGNG NMGTLNGNTNGSDRINGSAIFRERYQHPALAAIINEAQGLKFREESENMW *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22709-PA | 714 | GF22709-PA | 143..666 | 10..546 | 2506 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25333-PA | 673 | GG25333-PA | 146..673 | 10..550 | 2707 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13265-PA | 809 | GH13265-PA | 236..769 | 1..546 | 2385 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32982-PB | 550 | CG32982-PB | 1..550 | 1..550 | 2906 | 100 | Plus |
CG32982-PE | 793 | CG32982-PE | 253..793 | 10..550 | 2853 | 100 | Plus |
CG32982-PD | 778 | CG32982-PD | 238..778 | 10..550 | 2853 | 100 | Plus |
CG32982-PF | 730 | CG32982-PF | 164..682 | 10..546 | 2701 | 96.3 | Plus |
CG32982-PG | 720 | CG32982-PG | 149..667 | 10..546 | 2701 | 96.3 | Plus |
CG32982-PA | 715 | CG32982-PA | 149..667 | 10..546 | 2701 | 96.3 | Plus |
CG32982-PH | 687 | CG32982-PH | 149..639 | 10..546 | 2522 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17463-PA | 718 | GI17463-PA | 142..678 | 10..546 | 2378 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26246-PA | 336 | GL26246-PA | 1..142 | 1..145 | 741 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17223-PA | 822 | GA17223-PA | 238..774 | 1..546 | 2514 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17410-PA | 532 | GM17410-PA | 1..532 | 1..550 | 2804 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12028-PA | 260 | GD12028-PA | 1..255 | 78..332 | 1365 | 100 | Plus |
Dsim\GD23589-PA | 129 | GD23589-PA | 1..79 | 1..79 | 429 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14434-PA | 703 | GJ14434-PA | 139..663 | 10..546 | 2358 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15068-PA | 724 | GK15068-PA | 156..682 | 10..546 | 2318 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18827-PA | 672 | GE18827-PA | 149..672 | 10..550 | 2753 | 94.8 | Plus |
Translation from 213 to 1865
> RE11317.hyp MIFSTDLHWQSLLAGRIPVASMTGPIKRGLLWQQRDRLFSRWKERYFVLT RDYLHCFKRASGSANERASDMGQFIFKVKLVDVEKVEWLNRRSYSAIGLL LGREGRVLLRCDDGLEDWFELLEECTMTSKERRRALKIAQGPRSRASLAA PVSHASLQFQHFGLGGTYSSALDDWLMTNGTGGLARHKIGAGSLNGYGGA NPFLFSDSVPDLSALNNENHNHHLSGISTNHSTPQKIPHHSNANLSRYSN GYVSAQNSFTQAGALYGSPRRIFINSSFGSNQVVDEETEETEVQLRRPRL FRGVSATPDNGNELDRDWLYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKT ELDCSAHDSGLDTPPSTHRPSSYREASRDSTETNGSSSRGTLLNNSSPGG SFRAKKLSTQVSNLNQLNSLNGSRYSVQDQRILKMRNNEEDRCASIKMAN RLNQNQEQATYDPNQNRYYKNGNATPPTSLTPQHTPQHKLTMMHYGNGNG NMGTLNGNTNGSDRINGSAIFRERYQHPALAAIINEAQGLKFREESENMW *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32982-PB | 550 | CG32982-PB | 1..550 | 1..550 | 2906 | 100 | Plus |
CG32982-PE | 793 | CG32982-PE | 253..793 | 10..550 | 2853 | 100 | Plus |
CG32982-PD | 778 | CG32982-PD | 238..778 | 10..550 | 2853 | 100 | Plus |
CG32982-PF | 730 | CG32982-PF | 164..682 | 10..546 | 2701 | 96.3 | Plus |
CG32982-PG | 720 | CG32982-PG | 149..667 | 10..546 | 2701 | 96.3 | Plus |