BDGP Sequence Production Resources |
Search the DGRC for RE11532
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 115 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1738-RA |
Protein status: | RE11532.pep: gold |
Preliminary Size: | 590 |
Sequenced Size: | 807 |
Gene | Date | Evidence |
---|---|---|
CG1738 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1738 | 2002-06-10 | Blastp of sequenced clone |
CG1738 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1738 | 2008-04-29 | Release 5.5 accounting |
CG1738 | 2008-08-15 | Release 5.9 accounting |
CG1738 | 2008-12-18 | 5.12 accounting |
807 bp (807 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121667
> RE11532.complete CAGATGGACCGAGGCGTTACGTGGGAATTAGTACATTTTGGCACTGTACA AGTGCATTCAATATTTTGATTTCACTATTATTGCTGCAAATAAACACAGA AAACTGAAAGCATAATGAACGTCAGCGCCGATTTTAAGCCGGTGCCCACG CGTGCAGCGTTGGCGCTGCAAAAGAAGCAGGAGAACACCGAATTTCAGGC ACACGTCTTCCACGAATCGCACTTCCAATCGAAAAGTGGAACAAAAAAGC AGGACGACGGCGTCCAAAAATCGCACAAAACCAAGGAGGGCGGCATGGAA CTGAATCCCGAATTCGATATCAAGAAGGCGCGCCACGAGGTGCTCAATTT TGCGATCAAAAACCAGCGTGTGATCAAAAACAAGAGCAAAATGGAAATGT TTCAGCTGATCAAGCTGGGCGCCAAGCCGCTGAAGAAGGCCTCCAAAAAC TACAAGGAGCTGAAGGACGAACGCCAGCGGCTGAAGAATATTCGCGAGGA GCGCAAGAAGTTCCATCAGTTGGGCAAAAATCAAACGGGCGCCGCCAGCG TCAAATGCCGAACAAAATCGCAAAAGGAGCGCAACGACAAGAGGCGCGCG CCCGTTTCACACATCGATCAGCACTACGGCAAGGCGCAGCCCAAGTTTAA GACGAGAAAATAGTTGTTTATATAGCTCTTAGTTAAATACTAAAACTAGC TTAGTCAAAGGATGGCACTGTTTAAAAATCAATTTATCTATTCTAGCCCT AACGTCAGGCTTAAATTATATAATATATAACTATACCAGCAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1738-RA | 795 | CG1738-RA | 5..795 | 1..791 | 3940 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11240202..11240991 | 1..790 | 3935 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11349058..11349848 | 1..791 | 3940 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11357156..11357946 | 1..791 | 3940 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11240202..11240991 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 1..549 | 115..663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 1..549 | 115..663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 1..549 | 115..663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 1..549 | 115..663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 1..549 | 115..663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 5..794 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 5..794 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 10..799 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 5..794 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1738-RA | 10..799 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11349058..11349847 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11349058..11349847 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11349058..11349847 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11243091..11243880 | 1..790 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11357156..11357945 | 1..790 | 99 | Plus |
Translation from 114 to 662
> RE11532.pep MNVSADFKPVPTRAALALQKKQENTEFQAHVFHESHFQSKSGTKKQDDGV QKSHKTKEGGMELNPEFDIKKARHEVLNFAIKNQRVIKNKSKMEMFQLIK LGAKPLKKASKNYKELKDERQRLKNIREERKKFHQLGKNQTGAASVKCRT KSQKERNDKRRAPVSHIDQHYGKAQPKFKTRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21764-PA | 185 | GF21764-PA | 1..185 | 1..182 | 681 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18405-PA | 182 | GG18405-PA | 1..182 | 1..182 | 887 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12178-PA | 182 | GH12178-PA | 1..179 | 1..181 | 512 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1738-PA | 182 | CG1738-PA | 1..182 | 1..182 | 941 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15708-PA | 180 | GI15708-PA | 1..179 | 1..181 | 549 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14847-PA | 187 | GL14847-PA | 1..187 | 1..182 | 622 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14492-PA | 187 | GA14492-PA | 1..187 | 1..182 | 623 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11471-PA | 182 | GM11471-PA | 1..182 | 1..182 | 911 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17014-PA | 177 | GD17014-PA | 1..177 | 6..182 | 861 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15236-PA | 182 | GJ15236-PA | 1..181 | 1..181 | 559 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25330-PA | 188 | GK25330-PA | 1..188 | 1..182 | 600 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15924-PA | 182 | GE15924-PA | 1..182 | 1..182 | 870 | 91.8 | Plus |
Translation from 114 to 662
> RE11532.hyp MNVSADFKPVPTRAALALQKKQENTEFQAHVFHESHFQSKSGTKKQDDGV QKSHKTKEGGMELNPEFDIKKARHEVLNFAIKNQRVIKNKSKMEMFQLIK LGAKPLKKASKNYKELKDERQRLKNIREERKKFHQLGKNQTGAASVKCRT KSQKERNDKRRAPVSHIDQHYGKAQPKFKTRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1738-PA | 182 | CG1738-PA | 1..182 | 1..182 | 941 | 100 | Plus |