BDGP Sequence Production Resources |
Search the DGRC for RE11562
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 115 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17337-RA |
Protein status: | RE11562.pep: gold |
Preliminary Size: | 2154 |
Sequenced Size: | 1703 |
Gene | Date | Evidence |
---|---|---|
CG17337 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17337 | 2002-05-30 | Blastp of sequenced clone |
CG17337 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17337 | 2008-04-29 | Release 5.5 accounting |
CG17337 | 2008-08-15 | Release 5.9 accounting |
CG17337 | 2008-12-18 | 5.12 accounting |
1703 bp (1703 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118368
> RE11562.complete AGCGCCATTACTTGAGTTTTATAAATATAAGCGCGCGCCGACAGCAGGTT AGATTTAAATAGCTAGAGACCGGAGACGATTACAGCTGTTACAGTATTCC ATAGAAAAAAAAGCGCGATGCCCGAGTTATCAAGTGAACTTCAAAAATTC TTTGCCTTTGTGGACGGCAAAAAAGAAGATTACATCGGGGCCCTAAAAAC CGTTGTGGGTATTCAGTCCGTATCAGCCTGGCCCGAAAAGCGAGGCGAGA TCGGTCGTATGGTGGAATGGACCGCGGATCGGCTGAGGTCTCTGGGCGCC GAGACAGAGCTGGCAGATGTGGGTCAGCAGACTTTGCCGAACGGCCAGAT TATACCTCTACCAAAGGTTCTGCTGGGAACTTTGGGCAAAGACCCCTCTA AGAAGACCGTGTTGGTCTATGGTCATTTGGATGTGCAGCCCGCCCTGAAG GAAGATGGATGGAACACCAATCCCTTTGAGCTTACAGAGGTGGATGGAAA ACTGTTTGGACGCGGGGCATCCGACGACAAGGGACCTGTTCTGTGCTGGA TCCACGCTATCGAAGCTTATCAGAAGCTCAACATTGCACTGCCTGTGAAT GTTAAATTCGTATTTGAGGGAATGGAGGAAAGCGGCAGCGAAGGCCTCGA TGACTTGTTATTGGAACGTAAAGATAATTTCTTAGCGGATGTTGATTTTG TTTGCATATCCGATAACTACTGGCTTGGAAAAAAACGCCCTTGCCTCACA TATGGGCTTCGCGGTTTGGCATACTTTCAAGTGGAGGTGGAATGCTCCAG CAAAGACTTGCATAGTGGAGTTTTTGGGGGTACAGTTCACGAAGCAATGC CGGATCTGTGTCATTTGCTGAGCATTCTTGTCGATAAAGATACAAATATC CTAGTCCCTGGTGTGGATCGCGACGTCGCACCACAGATTAAGAACGAGCA ATCTATATATGAGAACATAGACTTTGAAGTTTCTGAGTACAAGAAAGACA TTGGTGTTGAACAGCTGCCGCATAATGGCGATAAAACAAGGTTACTTCAA GCCAGGTGGCGCTATCCCAGTCTTTCTGTTCACGGAATTGAAGGTGCATT TTATGAGCCAGGCGCAAAAACTGTCATTCCGAAGAAGGTTATTGGTAAGT TCTCTATTCGCCTTGTCCCCAACCAAGATCCAAAGCATATTGAGGAGTGT GTTGTAAAATACCTTAATGATAAATGGGCCGAGCGAGGATCTCCTAACAA AATGAAGGTTACAATGCTCTCAGCTGGCAAGCCCTGGACTGAGGACCCTA ACCATCCTCATTATGAGGCTGCAAAAAGAGCCATAAAGCATGTTTTCAAT GTGGAACCAGATATGACCCGCGAAGGGGGATCTATTCCAGTAACGTTAAC ATTGCAGGAAGCCACTGGTAAAAACGTTATCCTTGTGCCAGTGGGTGCAT GTGACGACGGTGCCCATTCTCAAAATGAGAAAATCGATATTTACAATTAC ATCGAAGGCACTAAACTTCTTGGCGCCTATCTGCACGAAGTGGGAAAATT ATAAAATCGGAAGGCGTTGAAACGATAAACATCACAATGGTGCACATATA AATATATCTATATATCCATTATATTTTGAGAGACTCCTGTACATTGTTTA GTAAACATTTGTTGATGATATACATATTCAAATTTTTAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17337-RA | 1821 | CG17337-RA | 47..1735 | 3..1691 | 8445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1585830..1586600 | 156..926 | 3855 | 100 | Plus |
chr2R | 21145070 | chr2R | 1586789..1587056 | 993..1260 | 1325 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 1587108..1587361 | 1256..1509 | 1270 | 100 | Plus |
chr2R | 21145070 | chr2R | 1587416..1587593 | 1510..1687 | 890 | 100 | Plus |
chr2R | 21145070 | chr2R | 1585230..1585382 | 3..155 | 765 | 100 | Plus |
chr2R | 21145070 | chr2R | 1586660..1586732 | 925..997 | 350 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 5698456..5699226 | 156..926 | 3855 | 100 | Plus |
2R | 25286936 | 2R | 5699415..5699682 | 993..1260 | 1340 | 100 | Plus |
2R | 25286936 | 2R | 5699735..5699988 | 1256..1509 | 1270 | 100 | Plus |
2R | 25286936 | 2R | 5700043..5700224 | 1510..1691 | 910 | 100 | Plus |
2R | 25286936 | 2R | 5697856..5698008 | 3..155 | 765 | 100 | Plus |
2R | 25286936 | 2R | 5699286..5699358 | 925..997 | 350 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 5699655..5700425 | 156..926 | 3855 | 100 | Plus |
2R | 25260384 | 2R | 5700614..5700881 | 993..1260 | 1340 | 100 | Plus |
2R | 25260384 | 2R | 5700934..5701187 | 1256..1509 | 1270 | 100 | Plus |
2R | 25260384 | 2R | 5701242..5701423 | 1510..1691 | 910 | 100 | Plus |
2R | 25260384 | 2R | 5699055..5699207 | 3..155 | 765 | 100 | Plus |
2R | 25260384 | 2R | 5700485..5700557 | 925..997 | 350 | 98.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1585228..1585382 | 1..155 | 99 | -> | Plus |
chr2R | 1585830..1586598 | 156..924 | 100 | -> | Plus |
chr2R | 1586660..1586727 | 925..992 | 100 | -> | Plus |
chr2R | 1586789..1587053 | 993..1257 | 99 | -> | Plus |
chr2R | 1587110..1587361 | 1258..1509 | 100 | -> | Plus |
chr2R | 1587416..1587593 | 1510..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1437 | 118..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1437 | 118..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1437 | 118..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1437 | 118..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1437 | 118..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1687 | 1..1687 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1687 | 1..1687 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1661 | 19..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1687 | 1..1687 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17337-RA | 1..1661 | 19..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5699737..5699988 | 1258..1509 | 100 | -> | Plus |
2R | 5699415..5699679 | 993..1257 | 100 | -> | Plus |
2R | 5697854..5698008 | 1..155 | 99 | -> | Plus |
2R | 5698456..5699224 | 156..924 | 100 | -> | Plus |
2R | 5699286..5699353 | 925..992 | 100 | -> | Plus |
2R | 5700043..5700220 | 1510..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5699737..5699988 | 1258..1509 | 100 | -> | Plus |
2R | 5699415..5699679 | 993..1257 | 100 | -> | Plus |
2R | 5697854..5698008 | 1..155 | 99 | -> | Plus |
2R | 5698456..5699224 | 156..924 | 100 | -> | Plus |
2R | 5699286..5699353 | 925..992 | 100 | -> | Plus |
2R | 5700043..5700220 | 1510..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5699737..5699988 | 1258..1509 | 100 | -> | Plus |
2R | 5699415..5699679 | 993..1257 | 100 | -> | Plus |
2R | 5697854..5698008 | 1..155 | 99 | -> | Plus |
2R | 5698456..5699224 | 156..924 | 100 | -> | Plus |
2R | 5699286..5699353 | 925..992 | 100 | -> | Plus |
2R | 5700043..5700220 | 1510..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1585359..1585513 | 1..155 | 99 | -> | Plus |
arm_2R | 1585961..1586729 | 156..924 | 100 | -> | Plus |
arm_2R | 1586791..1586858 | 925..992 | 100 | -> | Plus |
arm_2R | 1586920..1587184 | 993..1257 | 100 | -> | Plus |
arm_2R | 1587242..1587493 | 1258..1509 | 100 | -> | Plus |
arm_2R | 1587548..1587725 | 1510..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5699655..5700423 | 156..924 | 100 | -> | Plus |
2R | 5700485..5700552 | 925..992 | 100 | -> | Plus |
2R | 5700614..5700878 | 993..1257 | 100 | -> | Plus |
2R | 5700936..5701187 | 1258..1509 | 100 | -> | Plus |
2R | 5701242..5701419 | 1510..1687 | 100 | Plus | |
2R | 5699053..5699207 | 1..155 | 99 | -> | Plus |
Translation from 117 to 1553
> RE11562.pep MPELSSELQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVE WTADRLRSLGAETELADVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLV YGHLDVQPALKEDGWNTNPFELTEVDGKLFGRGASDDKGPVLCWIHAIEA YQKLNIALPVNVKFVFEGMEESGSEGLDDLLLERKDNFLADVDFVCISDN YWLGKKRPCLTYGLRGLAYFQVEVECSSKDLHSGVFGGTVHEAMPDLCHL LSILVDKDTNILVPGVDRDVAPQIKNEQSIYENIDFEVSEYKKDIGVEQL PHNGDKTRLLQARWRYPSLSVHGIEGAFYEPGAKTVIPKKVIGKFSIRLV PNQDPKHIEECVVKYLNDKWAERGSPNKMKVTMLSAGKPWTEDPNHPHYE AAKRAIKHVFNVEPDMTREGGSIPVTLTLQEATGKNVILVPVGACDDGAH SQNEKIDIYNYIEGTKLLGAYLHEVGKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13844-PA | 478 | GF13844-PA | 1..478 | 1..478 | 2342 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23176-PA | 478 | GG23176-PA | 1..478 | 1..478 | 2460 | 96.4 | Plus |
Dere\GG23177-PA | 478 | GG23177-PA | 1..478 | 1..478 | 2460 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20431-PA | 478 | GH20431-PA | 1..478 | 1..478 | 2260 | 86.4 | Plus |
Dgri\GH11455-PA | 628 | GH11455-PA | 83..542 | 15..476 | 718 | 36.3 | Plus |
Dgri\GH11456-PA | 594 | GH11456-PA | 51..514 | 13..476 | 522 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17337-PA | 478 | CG17337-PA | 1..478 | 1..478 | 2532 | 100 | Plus |
CG17337-PC | 431 | CG17337-PC | 1..431 | 48..478 | 2292 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19613-PA | 478 | GI19613-PA | 1..478 | 1..478 | 2243 | 85.4 | Plus |
Dmoj\GI21918-PA | 637 | GI21918-PA | 89..550 | 15..478 | 732 | 35.8 | Plus |
Dmoj\GI21920-PA | 593 | GI21920-PA | 67..516 | 29..476 | 448 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11063-PA | 478 | GL11063-PA | 1..478 | 1..478 | 2366 | 91 | Plus |
Dper\GL15638-PA | 211 | GL15638-PA | 5..211 | 272..478 | 1058 | 93.2 | Plus |
Dper\GL25906-PA | 511 | GL25906-PA | 28..495 | 5..477 | 930 | 40.2 | Plus |
Dper\GL15469-PA | 688 | GL15469-PA | 142..605 | 13..478 | 653 | 32.6 | Plus |
Dper\GL15776-PA | 100 | GL15776-PA | 1..100 | 379..478 | 528 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14468-PA | 478 | GA14468-PA | 1..478 | 1..478 | 2367 | 91 | Plus |
Dpse\GA25180-PA | 511 | GA25180-PA | 28..495 | 5..477 | 929 | 40.2 | Plus |
Dpse\GA24595-PA | 189 | GA24595-PA | 1..185 | 169..358 | 828 | 81.1 | Plus |
Dpse\GA23831-PA | 692 | GA23831-PA | 146..609 | 13..478 | 656 | 32.6 | Plus |
Dpse\GA25182-PA | 586 | GA25182-PA | 54..510 | 18..476 | 477 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16517-PA | 478 | GM16517-PA | 1..478 | 1..478 | 2515 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10382-PA | 1053 | GD10382-PA | 1..456 | 1..456 | 2387 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14978-PA | 478 | GJ14978-PA | 1..478 | 1..478 | 2274 | 87 | Plus |
Dvir\GJ17823-PA | 638 | GJ17823-PA | 103..553 | 26..478 | 698 | 35.7 | Plus |
Dvir\GJ17824-PA | 596 | GJ17824-PA | 44..518 | 6..476 | 479 | 26.3 | Plus |
Dvir\GJ19835-PA | 355 | GJ19835-PA | 154..346 | 285..477 | 366 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10616-PA | 480 | GK10616-PA | 6..480 | 4..478 | 2254 | 86.5 | Plus |
Dwil\GK15097-PA | 590 | GK15097-PA | 56..505 | 20..478 | 619 | 31.6 | Plus |
Dwil\GK15098-PA | 594 | GK15098-PA | 57..515 | 18..476 | 487 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20538-PA | 478 | GE20538-PA | 1..478 | 1..478 | 2477 | 97.1 | Plus |
Translation from 117 to 1553
> RE11562.hyp MPELSSELQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVE WTADRLRSLGAETELADVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLV YGHLDVQPALKEDGWNTNPFELTEVDGKLFGRGASDDKGPVLCWIHAIEA YQKLNIALPVNVKFVFEGMEESGSEGLDDLLLERKDNFLADVDFVCISDN YWLGKKRPCLTYGLRGLAYFQVEVECSSKDLHSGVFGGTVHEAMPDLCHL LSILVDKDTNILVPGVDRDVAPQIKNEQSIYENIDFEVSEYKKDIGVEQL PHNGDKTRLLQARWRYPSLSVHGIEGAFYEPGAKTVIPKKVIGKFSIRLV PNQDPKHIEECVVKYLNDKWAERGSPNKMKVTMLSAGKPWTEDPNHPHYE AAKRAIKHVFNVEPDMTREGGSIPVTLTLQEATGKNVILVPVGACDDGAH SQNEKIDIYNYIEGTKLLGAYLHEVGKL*