BDGP Sequence Production Resources |
Search the DGRC for RE11703
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 117 |
Well: | 3 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG33969-RA |
Protein status: | RE11703.pep: gold |
Preliminary Size: | 1291 |
Sequenced Size: | 1676 |
Gene | Date | Evidence |
---|---|---|
CG5571 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5571 | 2002-03-20 | Blastp of sequenced clone |
CG5571 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33969 | 2008-04-29 | Release 5.5 accounting |
CG33969 | 2008-08-15 | Release 5.9 accounting |
CG33969 | 2008-12-18 | 5.12 accounting |
1676 bp (1676 high quality bases) assembled on 2002-03-20
GenBank Submission: AY094851
> RE11703.complete ATTTGTTTGCGTTTTGTTCGGAAATCGTGGGAATATGAGCTAATCTCACG AATTGGCGTTGAAAGATATGATGAGCTCCCGCATGAGCTTGAAGGATCTG ACCATCGAATGCCTGCTCCTCATATTCGACTATTGCTCGGAGGGGGACCT ACTGTGCCTGTGCCGGGCGGACCCGGCTCTGGAGTATATTATTGAAGCCT ACTACTTCTACCCACTGGCCTACGATTTGCTGCTCTGTGGCCACCGGAAT AATCCAAGGATCGAACAGAGAAACCGAAGACGCCTGAAAAACTATGAACG CATCGAGCTGTCAAGGAACTGGGTTAGTGGCACCTATTTCGAACGACCAT ACTTCCACCATGCCCAGATGTTCCCCACCAAACTGTGCCTGGAGGCCGAC TTTCTGTACATCACACATGCCTGCTATCTGCGCAAGTACCGGCGGTCCAG CTGCGATGCACTGCATCGTCGCTTCGACGAGGAGATCTGTACGTCCGCAC AGACCGACATCTCCGATTTCGTCAAAAAGAATGAAACCATATTCGCGGGA AGGGTTTGTGGATCGTGCTTCCACTACGACACCGATAGCATGGTGATGAC GGAGCAGAGGATGCATCCGGCCAACGAATACTTGTACTGCGTAGACTTTG TCAAGGATCTGTACGCAACCAGCACAGATCACTGCTGCAGACTGTGGCAG CGTGCGCAGGAGTTTGGAATGACGCATTTTGATCAGGTGATGCATCTGCC GCACGCCTTTAGGTCTCTGGAACTCAGTTCGGATGGCCAGTGGCTGTATG GTGGACTATACACTGACAACGGTCGCCAGGCCTTGAGGGCAGTCCATGTT GAAAGTGGCGAGGAATTGGTGTTTAGTTCCAAAACAATGTCAATTTACGA CCTGAAATTGAAAGATGACCAGGTCATTTTCACGGCCAACTTCGATAGCA CGTTTCGTATGTTTGACAGACGCGTGGATCGCGATGTAGCCATTTGGGAT GATCCGTTCGACTCCTCCTTCTACTCCTTGGAGTATGATGGTCTGCACGC GGTGCTGGTTGGCACCAACAGACATGCACGGGTCAACCTTTACGATATAA GAATGAAGAAATACGTACAATTGTACTTTCCGGGAAGGACGCGAAGTCAT AATGGCTTGTCGCCAGTGTACAGCCTCGCCTGTGATAGCCAATATATGTT CGTGGCCACCGATCACAATATGCGTGTCTTTGACTTTAAGGCAAGCTGTG GAATTCGGAGAGACTACAGCAATATTGTATACAAACGAAGTGAAACTTAA TCACATTGGATAACCCATATTAAAAATGTGCCAAATCTTATACATTCATT GTTTTGAAGAAACCAAATGCGCCGTACAAATATACATTCAAGATGTCTGC TGATTTCCCGTAAAGCGTACTATTTGTTCTTATCAGAACAACTCGTGTCT AGTTTATTACGGAATTTTTTTAGAATAACACAAACCTTAACAATAATTGT ATAAGTAGGCAAAGGTAGAGAGAAGGCTATTACCGTCTTGTTTTTAAACT GTATCATCATACCATCAGTTTGTGTAGAACAAGTTTTATTGACCTGTCCA CGAATTGGATCCTAAAAAGAAAACTTTAAAACATCCACTTAAAGCATGTA TAAAAACGCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33969-RB | 3661 | CG33969-RB | 170..1831 | 1..1662 | 8295 | 99.9 | Plus |
CG33969-RA | 1904 | CG33969-RA | 170..1831 | 1..1662 | 8295 | 99.9 | Plus |
CG33969.a | 3628 | CG33969.a | 414..1798 | 278..1662 | 6910 | 99.9 | Plus |
CG33969.a | 3628 | CG33969.a | 146..416 | 1..271 | 1355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20380744..20381549 | 1658..854 | 3980 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 20381699..20382285 | 855..269 | 2935 | 100 | Minus |
chr3L | 24539361 | chr3L | 20382337..20382606 | 270..1 | 1350 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20391683..20392491 | 1662..854 | 4030 | 99.9 | Minus |
3L | 28110227 | 3L | 20392641..20393227 | 855..269 | 2935 | 100 | Minus |
3L | 28110227 | 3L | 20393279..20393548 | 270..1 | 1350 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20384783..20385591 | 1662..854 | 4030 | 99.8 | Minus |
3L | 28103327 | 3L | 20385741..20386327 | 855..269 | 2935 | 100 | Minus |
3L | 28103327 | 3L | 20386379..20386648 | 270..1 | 1350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20380742..20381547 | 856..1660 | 99 | <- | Minus |
chr3L | 20381699..20382283 | 271..855 | 100 | <- | Minus |
chr3L | 20382337..20382606 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RB | 1..1233 | 68..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RB | 1..1233 | 68..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RA | 1..1233 | 68..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RB | 1..1233 | 68..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RA | 1..1233 | 68..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RB | 1..1659 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RB | 1..1659 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RA | 6..1664 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RB | 1..1659 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33969-RA | 6..1664 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20391685..20392489 | 856..1660 | 99 | <- | Minus |
3L | 20392641..20393225 | 271..855 | 100 | <- | Minus |
3L | 20393279..20393548 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20391685..20392489 | 856..1660 | 99 | <- | Minus |
3L | 20392641..20393225 | 271..855 | 100 | <- | Minus |
3L | 20393279..20393548 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20391685..20392489 | 856..1660 | 99 | <- | Minus |
3L | 20392641..20393225 | 271..855 | 100 | <- | Minus |
3L | 20393279..20393548 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20384785..20385589 | 856..1660 | 99 | <- | Minus |
arm_3L | 20385741..20386325 | 271..855 | 100 | <- | Minus |
arm_3L | 20386379..20386648 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20384785..20385589 | 856..1660 | 99 | <- | Minus |
3L | 20385741..20386325 | 271..855 | 100 | <- | Minus |
3L | 20386379..20386648 | 1..270 | 100 | Minus |
Translation from 67 to 1299
> RE11703.pep MMSSRMSLKDLTIECLLLIFDYCSEGDLLCLCRADPALEYIIEAYYFYPL AYDLLLCGHRNNPRIEQRNRRRLKNYERIELSRNWVSGTYFERPYFHHAQ MFPTKLCLEADFLYITHACYLRKYRRSSCDALHRRFDEEICTSAQTDISD FVKKNETIFAGRVCGSCFHYDTDSMVMTEQRMHPANEYLYCVDFVKDLYA TSTDHCCRLWQRAQEFGMTHFDQVMHLPHAFRSLELSSDGQWLYGGLYTD NGRQALRAVHVESGEELVFSSKTMSIYDLKLKDDQVIFTANFDSTFRMFD RRVDRDVAIWDDPFDSSFYSLEYDGLHAVLVGTNRHARVNLYDIRMKKYV QLYFPGRTRSHNGLSPVYSLACDSQYMFVATDHNMRVFDFKASCGIRRDY SNIVYKRSET*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24141-PA | 415 | GF24141-PA | 1..407 | 1..408 | 1555 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13320-PA | 409 | GG13320-PA | 1..403 | 1..403 | 1999 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14594-PA | 402 | GH14594-PA | 1..396 | 6..402 | 1417 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33969-PA | 410 | CG33969-PA | 1..410 | 1..410 | 2221 | 100 | Plus |
CG33969-PC | 407 | CG33969-PC | 1..407 | 1..410 | 2191 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13479-PA | 230 | GI13479-PA | 1..226 | 182..404 | 879 | 72.1 | Plus |
Dmoj\GI13478-PA | 163 | GI13478-PA | 1..148 | 6..153 | 432 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11912-PA | 401 | GL11912-PA | 1..396 | 6..403 | 1543 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18978-PA | 401 | GA18978-PA | 1..396 | 6..403 | 1543 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22223-PA | 410 | GM22223-PA | 1..410 | 1..410 | 2078 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12195-PA | 410 | GD12195-PA | 1..410 | 1..410 | 2110 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11841-PA | 404 | GJ11841-PA | 1..398 | 6..402 | 1357 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17228-PA | 409 | GK17228-PA | 2..399 | 6..403 | 1498 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22408-PA | 409 | GE22408-PA | 2..404 | 1..403 | 2002 | 92.1 | Plus |
Translation from 67 to 1299
> RE11703.hyp MMSSRMSLKDLTIECLLLIFDYCSEGDLLCLCRADPALEYIIEAYYFYPL AYDLLLCGHRNNPRIEQRNRRRLKNYERIELSRNWVSGTYFERPYFHHAQ MFPTKLCLEADFLYITHACYLRKYRRSSCDALHRRFDEEICTSAQTDISD FVKKNETIFAGRVCGSCFHYDTDSMVMTEQRMHPANEYLYCVDFVKDLYA TSTDHCCRLWQRAQEFGMTHFDQVMHLPHAFRSLELSSDGQWLYGGLYTD NGRQALRAVHVESGEELVFSSKTMSIYDLKLKDDQVIFTANFDSTFRMFD RRVDRDVAIWDDPFDSSFYSLEYDGLHAVLVGTNRHARVNLYDIRMKKYV QLYFPGRTRSHNGLSPVYSLACDSQYMFVATDHNMRVFDFKASCGIRRDY SNIVYKRSET*