BDGP Sequence Production Resources |
Search the DGRC for RE11751
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 117 |
Well: | 51 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15643-RA |
Protein status: | RE11751.pep: gold |
Preliminary Size: | 639 |
Sequenced Size: | 1661 |
Gene | Date | Evidence |
---|---|---|
CG15643 | 2001-12-12 | Blastp of sequenced clone |
CG15643 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15643 | 2008-04-29 | Release 5.5 accounting |
CG15643 | 2008-08-15 | Release 5.9 accounting |
CG15643 | 2008-12-18 | 5.12 accounting |
1661 bp (1661 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070573
> RE11751.complete GATTTGGGAATTTGTTTTTGTGCTTGCTAACGAATTTCGCTTCCATTTAT TGCAAGAAAAAAAAAAAAAACAAAATAATACAAATAGAGGCATAGTGGGC CAGTAACTGATTGCACACCATGCTGCAACGCAGAGAAAAGAGAGCTCCCC CTTTCAATTTGAAGAGATCTTTTTCCAACGAGGAAGTTGCCTAGAAAAGT TCATCAACAATCCAGGAAAATTTCATCAGTTCAGTTCTGAGTGAAAAGTG CACCGACACTGCAACTGGATGTAATCACGATCAGCAGAAGTAGCTGAAGT CATCCGAGGAGTGACAGCACCCAATGCCCCAGTAGCATTCAAACTGAAAA ATTCCCCGATTGTGGCCACTGCCATGTCCGTGTCCCAGGAGAATTACACC CGGCGGGAGCTGTGATGGAGCGCTAGGTATTGGCCAGGATGTGGCCAGCC GCCCTGACACGCCTGCTGAGACGCCGGATTGTGTACATCGTGCTGGTGGT ACTGCTGCTCATCTACGGATTCGGACACATTTTCGATCGGGACTCGTTTT CCGGCCTGCACTATGACGAGTATGTGGTGCAGCGCACACGACCGCTCCTG TGGACGCAGCAGCTTCTGGCGCCGGAGGAGCAGCTCAATCGCACGCGCGG CGATCCCGAGGCACGCTGCCGCAACTCTGTCCAGGGCCGCCAATGGCTGG CGGACGAGCGAGGATTCGTGTGCCGACGCGAGGAGGTGCTAACCAACGGC TGCTGCAACCTGGAGCTGCCCGGCATTGGATACTACAGCTGCCGCACATG CAATACCAGCACCCACTGTTGCGGTGTTTATGAGTATTGCGTCTCCTGCT GCCTGCACCCCGGACAACAGCCGCTGCTGGAGCGCGTCCTGCAGGCGCCC AACACGCCCAAGTACATCTTCGCCAGCGTGACGGACCACTTCGAGCTGTG CCTGGTCAAGTGCCGCACGAACTCGCACTCCGTGGAGCACGAGAACAAGT ACCGCGATCCGGCGGCCAAGCATTGTTATGGTCTAACCGATGCGCACGAA TCCCAGCGTGATGTTGCGCCCCAGTGAGCCAGTCGCAGCTGACCACTGCG TTCACCTTCTACTGACCACCGTCCAGTACGATGACTCTGCCTTGTGTACA ACGTTTTCGGCCGGCACACATAGACGTTCAACGGATGAGCTTTACCTCGA ACTAGAAATGAGAAAGTTTTAAGTCATCAGCTGGTTCGTTGGCAATATTT CTACTAAGTCAGGGATCGCTTTAGGCTAGAAGTAATACGTTTTCTCTCTT ATTTACTGCTTAATTAATTCATTAATAACAACTATAGAACATAATCGATC ACATTTTTTTTTTTAACTAAATCGAATTTAGTTTGTATCTTTAGCCAACA GATGTTTTATAGCTCTTTTTTATGTTTAATGGCTTTAATTTTATTTTATA ATGCAATATTGCCTAGCCATAAGCTATAGAAATGTGCAATTTTCGTATTT TAGCGTTAGACGAATACAATTGATTATCCATGTTTAATTGTGTGAATAAA TAAGCAGTGGATATAATCAAATAAGCAAGAAATAGTGTGGTCAACATTAA TTTATTTATATAGTCTCTTGATCAAATGAACTAACTATTTAAAACAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15643-RA | 1692 | CG15643-RA | 1..1648 | 2..1648 | 8170 | 99.8 | Plus |
CG7860.a | 1316 | CG7860.a | 1241..1316 | 1208..1133 | 350 | 97.3 | Minus |
CG7860-RA | 1449 | CG7860-RA | 1385..1449 | 1648..1584 | 325 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15460300..15461403 | 541..1645 | 99 | <- | Minus |
chrX | 15461482..15462020 | 1..540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..639 | 439..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..639 | 439..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..639 | 439..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..639 | 439..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..639 | 439..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..1645 | 2..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..1645 | 2..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 47..1692 | 1..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 1..1645 | 2..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15643-RA | 47..1692 | 1..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15570380..15571485 | 541..1645 | 99 | <- | Minus |
X | 15571564..15572102 | 1..540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15570380..15571485 | 541..1645 | 99 | <- | Minus |
X | 15571564..15572102 | 1..540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15570380..15571485 | 541..1645 | 99 | <- | Minus |
X | 15571564..15572102 | 1..540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15464413..15465518 | 541..1645 | 99 | <- | Minus |
arm_X | 15465597..15466135 | 1..540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15578478..15579583 | 541..1645 | 99 | <- | Minus |
X | 15579662..15580200 | 1..540 | 99 | Minus |
Translation from 438 to 1076
> RE11751.pep MWPAALTRLLRRRIVYIVLVVLLLIYGFGHIFDRDSFSGLHYDEYVVQRT RPLLWTQQLLAPEEQLNRTRGDPEARCRNSVQGRQWLADERGFVCRREEV LTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERV LQAPNTPKYIFASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYGLT DAHESQRDVAPQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22253-PA | 217 | GF22253-PA | 1..213 | 1..212 | 793 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19394-PA | 217 | GG19394-PA | 1..212 | 1..212 | 1103 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11862-PA | 214 | GH11862-PA | 1..211 | 1..211 | 864 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15643-PB | 212 | CG15643-PB | 1..212 | 1..212 | 1173 | 100 | Plus |
CG15643-PA | 212 | CG15643-PA | 1..212 | 1..212 | 1173 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15640-PA | 216 | GI15640-PA | 1..212 | 1..212 | 872 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16447-PA | 216 | GL16447-PA | 1..211 | 1..211 | 826 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13867-PA | 216 | GA13867-PA | 1..211 | 1..211 | 833 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22548-PA | 197 | GM22548-PA | 1..197 | 1..211 | 916 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24664-PA | 127 | GD24664-PA | 1..126 | 1..126 | 661 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19227-PA | 215 | GJ19227-PA | 1..211 | 1..212 | 836 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19833-PA | 215 | GK19833-PA | 1..211 | 1..212 | 779 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16041-PA | 217 | GE16041-PA | 1..212 | 1..212 | 1118 | 98.1 | Plus |
Translation from 438 to 1076
> RE11751.hyp MWPAALTRLLRRRIVYIVLVVLLLIYGFGHIFDRDSFSGLHYDEYVVQRT RPLLWTQQLLAPEEQLNRTRGDPEARCRNSVQGRQWLADERGFVCRREEV LTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERV LQAPNTPKYIFASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYGLT DAHESQRDVAPQ*