BDGP Sequence Production Resources |
Search the DGRC for RE11907
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 119 |
Well: | 7 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32803-RA |
Protein status: | RE11907.pep: gold |
Sequenced Size: | 827 |
Gene | Date | Evidence |
---|---|---|
CG32803 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32803 | 2004-08-13 | Blastp of sequenced clone |
CG32803 | 2008-04-29 | Release 5.5 accounting |
CG32803 | 2008-08-15 | Release 5.9 accounting |
CG32803 | 2008-12-18 | 5.12 accounting |
827 bp (827 high quality bases) assembled on 2004-08-13
GenBank Submission: BT016026
> RE11907.complete GTTTTCATTTACTGTTGCTTCAAGCAGGCGAATGAACCTGGAACAGACTC CTCCTGTAATGCGCACAGCAACCGCCTGAGATTCTCGCAGTAGCCACGCA ACATGGCTCACTCGAACAAGGCTCGCAAAGCAGCCAAAGAGGCAAACGCC AAGAAGTCTGCGGGATCGGGAACAGAGAGCAAACCGGAGCACGTAAAGAT ACATGGCCCAGGCGATCGTAGTGCAGGAGTTCTGACTGGCGACCAGTTCC TGGAGAGCTTGCTCCAGACTCTCTACAGGTCATGGCTTCAAATCTGCCGC CTGGCAGATTTTGTGATGTCCGAGCTAGGTGGAAATGATTTCCTGGAGGC CACCGCGGCCTGGTGCACCCGGAATCCGCACGTTGCTATCTGCCTGCTAG CTGGTGGTCTTGTATTCATGCTGCCCTTCCTTATAATATTTGGGTTTGGA ATAGCCACCATGGTTATGACCTTTACAGGTTTGCTGGTGCTAGAAGGCAC ACTCCTGACCATTGTGTCCATGGTGTTCTTCGCCTGCCTGGGAGGACTAG TCATAATGGTACCTCTCTTCGGTGTCGCCGCTGTTGCTGCCTATTTCGGA TTTGCCCAGGTGTATGGCCTATGTGATGGAATAGAGATCCATAAGAGCGC GTGGGTCATGTTCTTTAGGGATCAACGGAAGGCCGGCGATCCGCCGCCAG CTGCTGTGACCATAACCGATGAACCCACTTCTACGACTGCATAAACCAAT ATTGCTTGCCCAACTTAAATATGTATTAAGAAATTAAAGACCAGTGTTTG AATACTTTTGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32803-RA | 940 | CG32803-RA | 117..930 | 1..814 | 4070 | 100 | Plus |
CG32803-RB | 876 | CG32803-RB | 338..868 | 284..814 | 2655 | 100 | Plus |
nc_21462.b | 794 | nc_21462.b | 83..262 | 284..105 | 900 | 100 | Minus |
CG32803-RB | 876 | CG32803-RB | 1..179 | 106..284 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1794542..1794858 | 811..495 | 1585 | 100 | Minus |
chrX | 22417052 | chrX | 1794907..1795120 | 497..284 | 1070 | 100 | Minus |
chrX | 22417052 | chrX | 1795279..1795458 | 284..105 | 900 | 100 | Minus |
chrX | 22417052 | chrX | 1795642..1795747 | 106..1 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1900696..1901015 | 814..495 | 1600 | 100 | Minus |
X | 23542271 | X | 1901064..1901277 | 497..284 | 1070 | 100 | Minus |
X | 23542271 | X | 1901436..1901615 | 284..105 | 900 | 100 | Minus |
X | 23542271 | X | 1901799..1901904 | 106..1 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1908794..1909113 | 814..495 | 1600 | 100 | Minus |
X | 23527363 | X | 1909162..1909375 | 497..284 | 1070 | 100 | Minus |
X | 23527363 | X | 1909534..1909713 | 284..105 | 900 | 100 | Minus |
X | 23527363 | X | 1909897..1910002 | 106..1 | 530 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1794542..1794856 | 497..811 | 100 | <- | Minus |
chrX | 1794908..1795120 | 284..496 | 100 | <- | Minus |
chrX | 1795280..1795457 | 106..283 | 100 | <- | Minus |
chrX | 1795643..1795747 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 1..642 | 103..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 1..642 | 103..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 1..642 | 103..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 1..642 | 103..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 1..642 | 103..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 35..845 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 35..845 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 8..818 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 35..845 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32803-RA | 8..818 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1901437..1901614 | 106..283 | 100 | <- | Minus |
X | 1901800..1901904 | 1..105 | 100 | Minus | |
X | 1900699..1901013 | 497..811 | 100 | <- | Minus |
X | 1901065..1901277 | 284..496 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1901437..1901614 | 106..283 | 100 | <- | Minus |
X | 1901800..1901904 | 1..105 | 100 | Minus | |
X | 1900699..1901013 | 497..811 | 100 | <- | Minus |
X | 1901065..1901277 | 284..496 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1901437..1901614 | 106..283 | 100 | <- | Minus |
X | 1901800..1901904 | 1..105 | 100 | Minus | |
X | 1900699..1901013 | 497..811 | 100 | <- | Minus |
X | 1901065..1901277 | 284..496 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1794732..1795046 | 497..811 | 100 | <- | Minus |
arm_X | 1795098..1795310 | 284..496 | 100 | <- | Minus |
arm_X | 1795470..1795647 | 106..283 | 100 | <- | Minus |
arm_X | 1795833..1795937 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1909163..1909375 | 284..496 | 100 | <- | Minus |
X | 1909535..1909712 | 106..283 | 100 | <- | Minus |
X | 1909898..1910002 | 1..105 | 100 | Minus | |
X | 1908797..1909111 | 497..811 | 100 | <- | Minus |
Translation from 102 to 743
> RE11907.pep MAHSNKARKAAKEANAKKSAGSGTESKPEHVKIHGPGDRSAGVLTGDQFL ESLLQTLYRSWLQICRLADFVMSELGGNDFLEATAAWCTRNPHVAICLLA GGLVFMLPFLIIFGFGIATMVMTFTGLLVLEGTLLTIVSMVFFACLGGLV IMVPLFGVAAVAAYFGFAQVYGLCDGIEIHKSAWVMFFRDQRKAGDPPPA AVTITDEPTSTTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19473-PA | 183 | GF19473-PA | 20..178 | 51..212 | 473 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12669-PA | 213 | GG12669-PA | 1..212 | 1..212 | 1001 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17846-PA | 151 | GH17846-PA | 1..146 | 57..206 | 345 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32803-PA | 213 | CG32803-PA | 1..213 | 1..213 | 1103 | 100 | Plus |
CG32803-PC | 242 | CG32803-PC | 31..242 | 2..213 | 1098 | 100 | Plus |
CG32803-PD | 207 | CG32803-PD | 1..207 | 1..213 | 1059 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21759-PA | 126 | GI21759-PA | 1..126 | 72..209 | 330 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18346-PA | 194 | GL18346-PA | 1..187 | 2..208 | 492 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27596-PA | 305 | GA27596-PA | 156..302 | 44..194 | 517 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18938-PA | 212 | GM18938-PA | 1..212 | 1..213 | 959 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16404-PA | 212 | GD16404-PA | 1..212 | 1..213 | 967 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19137-PA | 164 | GJ19137-PA | 1..164 | 38..205 | 347 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16375-PA | 236 | GK16375-PA | 5..218 | 3..203 | 452 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16997-PA | 213 | GE16997-PA | 1..212 | 1..212 | 915 | 86.8 | Plus |
Translation from 102 to 743
> RE11907.hyp MAHSNKARKAAKEANAKKSAGSGTESKPEHVKIHGPGDRSAGVLTGDQFL ESLLQTLYRSWLQICRLADFVMSELGGNDFLEATAAWCTRNPHVAICLLA GGLVFMLPFLIIFGFGIATMVMTFTGLLVLEGTLLTIVSMVFFACLGGLV IMVPLFGVAAVAAYFGFAQVYGLCDGIEIHKSAWVMFFRDQRKAGDPPPA AVTITDEPTSTTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32803-PA | 213 | CG32803-PA | 1..213 | 1..213 | 1103 | 100 | Plus |
CG32803-PC | 242 | CG32803-PC | 31..242 | 2..213 | 1098 | 100 | Plus |
CG32803-PD | 207 | CG32803-PD | 1..207 | 1..213 | 1059 | 97.2 | Plus |
CG32803-PB | 142 | CG32803-PB | 1..142 | 72..213 | 738 | 100 | Plus |