Clone RE11923 Report

Search the DGRC for RE11923

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:119
Well:23
Vector:pFlc-1
Associated Gene/TranscriptRm62-RA
Protein status:RE11923.pep: gold
Sequenced Size:3012

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10279 2004-01-14 Blastp of sequenced clone
Rm62 2008-04-29 Release 5.5 accounting
Rm62 2008-08-15 Release 5.9 accounting
Rm62 2008-12-18 5.12 accounting

Clone Sequence Records

RE11923.complete Sequence

3012 bp (3012 high quality bases) assembled on 2004-01-14

GenBank Submission: BT011476

> RE11923.complete
ACTCTAATTTTGGACGAGGTTAGGTAAGACACGCGCGGATGCCGCGCTGC
GTAGGATAAATCCGTCATTAGCATAACCGCATTGAAGCTAAGTCTTCGGG
AAAATGCTTAAGCTTGTGCAATACATAGCCCCCCGGGTGGGCGGCGCCAC
GCCCCGACCGACTGCCTGCGGCTGGGGCAACTTGCTATTGATTTCCCCGA
GAAGTGGCGCGAGCTCCGAGAAATGTATAACGCAACGTCGCCATTTTCTT
TTCTCCTCCGCCAGCAGCAGCGGCACTTTCGCTTCTTCTTCTTCGCTCTG
CACCGAACAACGACAACAGTTCCACGGGAGTCGCAGGAATCGTGAGACAA
TACTGTTCCCAAGCACATATAGTAGTCTCCAAGCTCAGTCGCAGCGTGCG
TTTCGAGACAGCTCGAAACCAGATTCAGACGACTACGTAGATTCCATCCC
GAAAGCAGAGCAGCGGACGAGGACGAGGAAATCGCTTTTCAACGATCCCG
ACGAAAGAACTGAGGAAATCAAAATTGAAGGAGTAATGGCACCACACGAT
CGCGACTTTGGTCACAGTGGACGTGGCGGTCGCGGAGGCGATCGAGGCGG
CGATGATCGGCGAGGAGGCGGCGGCGGAGGCAATCGCTTCGGTGGCGGCG
GTGGCGGTGGCGATTACCACGGCATAAGGAATGGACGCGTCGAGAAGCGA
CGCGATGACCGCGGAGGCGGCAACCGATTTGGAGGTGGTGGTGGATTCGG
GGATCGCCGAGGAGGAGGTGGCGGCGGCAGCCAAGACCTCCCCATGCGTC
CGGTCGACTTCTCCAACCTGGCTCCCTTCAAGAAGAACTTTTACCAGGAG
CACCCTAACGTAGCAAACCGATCGCCCTACGAAGTTCAGAGGTATCGCGA
AGAGCAGGAGATCACCGTGCGCGGACAGGTGCCGAACCCCATCCAGGACT
TCTCCGAGGTCCATCTGCCCGACTACGTCATGAAGGAGATCCGCCGACAG
GGCTACAAGGCCCCCACCGCTATCCAAGCGCAGGGCTGGCCTATCGCCAT
GAGTGGCTCGAACTTCGTCGGCATTGCCAAGACGGGATCCGGAAAGACCC
TGGGCTACATCCTGCCCGCTATTGTCCACATCAACAACCAGCAGCCGCTG
CAGAGGGGCGACGGACCTATCGCCCTCGTGCTGGCCCCCACTCGGGAGCT
GGCCCAACAGATCCAGCAGGTGGCCACCGAATTCGGTTCCTCGTCGTATG
TTCGCAACACCTGCGTCTTCGGCGGCGCCCCGAAGGGCGGCCAAATGCGG
GATCTGCAGCGCGGCTGCGAGATCGTCATTGCCACACCCGGACGTCTTAT
TGATTTCCTCTCCGCCGGCTCTACTAACCTGAAGCGTTGCACCTACTTGG
TGCTGGACGAGGCCGATCGCATGTTAGACATGGGCTTCGAGCCCCAGATC
AGAAAGATCGTCTCACAGATCCGGCCCGACCGACAGACGCTCATGTGGAG
CGCTACCTGGCCCAAGGAGGTCAAGCAGCTTGCCGAGGACTTTTTGGGCA
ACTACATCCAGATCAACATTGGATCGCTGGAGCTGTCCGCCAATCACAAC
ATCCGCCAGGTGGTGGACGTTTGTGACGAGTTCAGCAAGGAGGAGAAATT
GAAGACCCTCCTGTCAGACATCTACGACACCAGCGAGAGCCCCGGCAAGA
TTATCATATTCGTGGAGACAAAGCGACGCGTGGACAACCTGGTGCGCTTC
ATCCGCAGCTTCGGAGTCCGTTGTGGAGCTATTCACGGTGACAAGTCGCA
ATCAGAACGAGACTTTGTGCTCCGTGAGTTCCGCTCGGGCAAGTCCAACA
TTCTGGTGGCCACCGATGTGGCGGCCCGTGGACTAGACGTGGACGGCATC
AAGTATGTCATCAACTTTGACTACCCGCAAAACAGCGAGGACTACATCCA
TCGCATCGGTCGCACAGGACGATCCAACACAAAGGGCACCTCTTTCGCCT
TCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTC
CGAGAAGCTAATCAGGAAATCAATCCTGCCCTGGAAAATCTGGCCCGCAA
CTCGCGCTACGACGGTGGCGGCGGACGCTCCCGTTATGGAGGCGGTGGCG
GCGGCGGTCGCTTCGGCGGCGGCGGCTTCAAGAAGGGCAGCCTGAGCAAC
GGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGAAGGCAGACACTC
GCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATA
GGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTA
AATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCG
CTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACAC
TACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAAATGATTTG
TAAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAG
AACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCAT
GTGATAATTTCTTAATTTAACGCAACGTATCACTAAACTAAAAGCAAAGG
AAATCGTAGCGCGAGGAGTACGTTGATGTAGTGGAGGAAAAGGAGGAAGT
AAGGATCATTCCCGTCTGTCCCGTTTTGATGACAATGAACAAAGGCTGAC
CTGACGAGCGACCTTTGTTTGATAAATAAATTCTTCAAATTACTTTTGGA
AAATTAACTTTTGGATACCTTTTATGGCTCAACACGAGAACAAGAATGTG
TAAAGCAAACAAAGCAAACGGGAAATCACATTAACTACTGACACTAAATA
CAAAAGAAAAACAAACTGTATGTACAAGATGAGAAGTTCTCTTTCAATTT
AATTTTTCGGAAAAAAATAAAGTTTGTGTATACCTATTACAACCTCAAAA
AAAAAAAAAAAA

RE11923.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Rm62-RA 3172 Rm62-RA 130..3124 1..2995 14975 100 Plus
Rm62-RB 3188 Rm62-RB 681..3140 536..2995 12300 100 Plus
Rm62-RE 3236 Rm62-RE 724..3188 531..2995 12295 99.9 Plus
Rm62-RB 3188 Rm62-RB 54..590 1..537 2685 100 Plus
Rm62-RE 3236 Rm62-RE 29..565 1..537 2685 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 1829643..1830752 1647..538 5550 100 Minus
chr3R 27901430 chr3R 1826045..1826979 2995..2061 4675 100 Minus
chr3R 27901430 chr3R 1833662..1834199 538..1 2690 100 Minus
chr3R 27901430 chr3R 1829299..1829537 1886..1648 1195 100 Minus
chr3R 27901430 chr3R 1827171..1827353 2066..1884 915 100 Minus
chr3L 24539361 chr3L 6946314..6946919 1630..1025 810 75.6 Minus
chrX 22417052 chrX 7820818..7821117 1609..1310 420 76 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:34:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6004017..6005126 1647..538 5550 100 Minus
3R 32079331 3R 6000431..6001365 2995..2061 4675 100 Minus
3R 32079331 3R 6008036..6008573 538..1 2690 100 Minus
3R 32079331 3R 6003673..6003911 1886..1648 1195 100 Minus
3R 32079331 3R 6001557..6001739 2066..1884 915 100 Minus
3L 28110227 3L 6954023..6954628 1630..1025 780 75.2 Minus
X 23542271 X 7928923..7929222 1609..1310 420 76 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 5744848..5745957 1647..538 5550 100 Minus
3R 31820162 3R 5741262..5742196 2995..2061 4675 100 Minus
3R 31820162 3R 5748867..5749404 538..1 2690 100 Minus
3R 31820162 3R 5744504..5744742 1886..1648 1195 100 Minus
3R 31820162 3R 5742388..5742570 2066..1884 915 100 Minus
X 23527363 X 7937021..7937257 1609..1373 390 77.6 Minus
3L 28103327 3L 6947214..6947373 1539..1380 380 82.5 Minus
3L 28103327 3L 6947527..6947677 1226..1076 260 78.1 Minus
3L 28103327 3L 6947123..6947203 1630..1550 180 81.4 Minus
X 23527363 X 7937421..7937479 1215..1157 175 86.4 Minus
3L 28103327 3L 6947393..6947454 1360..1299 145 82.2 Minus
X 23527363 X 7936512..7936546 1872..1838 145 94.2 Minus
Blast to na_te.dros performed on 2019-03-15 14:03:06 has no hits.

RE11923.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:03:49 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 1826044..1826974 2066..2996 96 <- Minus
chr3R 1827172..1827350 1887..2065 100 <- Minus
chr3R 1829299..1829537 1648..1886 100 <- Minus
chr3R 1829643..1830627 663..1647 100 == Minus
chr3R 1830718..1830752 538..572 100 <- Minus
chr3R 1833663..1834199 1..537 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:54:25 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2160 104..2263 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:42:10 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2160 104..2263 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:16:31 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2160 104..2263 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:30:57 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2160 104..2263 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:48:32 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2160 104..2263 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:51:43 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2995 1..2995 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:42:10 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RB 1..537 1..537 100 <- Plus
Rm62-RB 630..3087 538..2995 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:16:31 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2995 1..2995 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:30:57 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2995 1..2995 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:48:32 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
Rm62-RA 1..2995 1..2995 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:49 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6000430..6001360 2066..2996 99 <- Minus
3R 6001558..6001736 1887..2065 100 <- Minus
3R 6003673..6003911 1648..1886 100 <- Minus
3R 6004017..6005126 538..1647 100 <- Minus
3R 6008037..6008573 1..537 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:49 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6000430..6001360 2066..2996 99 <- Minus
3R 6001558..6001736 1887..2065 100 <- Minus
3R 6003673..6003911 1648..1886 100 <- Minus
3R 6004017..6005126 538..1647 100 <- Minus
3R 6008037..6008573 1..537 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:49 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6000430..6001360 2066..2996 99 <- Minus
3R 6001558..6001736 1887..2065 100 <- Minus
3R 6003673..6003911 1648..1886 100 <- Minus
3R 6004017..6005126 538..1647 100 <- Minus
3R 6008037..6008573 1..537 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:16:31 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1827280..1827458 1887..2065 100 <- Minus
arm_3R 1826152..1827082 2066..2996 99 <- Minus
arm_3R 1829395..1829633 1648..1886 100 <- Minus
arm_3R 1829739..1830848 538..1647 100 <- Minus
arm_3R 1833759..1834295 1..537 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:03:32 Download gff for RE11923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5741261..5742191 2066..2996 99 <- Minus
3R 5742389..5742567 1887..2065 100 <- Minus
3R 5744504..5744742 1648..1886 100 <- Minus
3R 5744848..5745957 538..1647 100 <- Minus
3R 5748868..5749404 1..537 100   Minus

RE11923.pep Sequence

Translation from 103 to 2262

> RE11923.pep
MLKLVQYIAPRVGGATPRPTACGWGNLLLISPRSGASSEKCITQRRHFLF
SSASSSGTFASSSSLCTEQRQQFHGSRRNRETILFPSTYSSLQAQSQRAF
RDSSKPDSDDYVDSIPKAEQRTRTRKSLFNDPDERTEEIKIEGVMAPHDR
DFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRR
DDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKNFYQEH
PNVANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQG
YKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQ
RGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRD
LQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIR
KIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNI
RQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFI
RSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIK
YVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLR
EANQEINPALENLARNSRYDGGGGRSRYGGGGGGGRFGGGGFKKGSLSNG
RGFGGGGGGGGEGRHSRFD*

RE11923.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18634-PA 704 GF18634-PA 1..704 1..719 2654 82.5 Plus
Dana\GF24750-PA 613 GF24750-PA 64..502 231..667 1757 73.8 Plus
Dana\GF10884-PA 822 GF10884-PA 86..538 215..670 1614 67.4 Plus
Dana\GF20995-PA 996 GF20995-PA 195..642 231..672 1451 60.1 Plus
Dana\GF16725-PA 693 GF16725-PA 209..647 236..664 1016 45.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10666-PA 720 GG10666-PA 1..720 1..719 3601 96.3 Plus
Dere\GG15018-PA 824 GG15018-PA 87..544 214..670 1617 66.7 Plus
Dere\GG17597-PA 955 GG17597-PA 195..656 236..690 1482 60.6 Plus
Dere\GG23261-PA 709 GG23261-PA 231..695 236..705 956 42 Plus
Dere\GG17877-PA 1222 GG17877-PA 458..889 234..663 899 42.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14289-PA 746 GH14289-PA 1..688 1..670 2654 81.3 Plus
Dgri\GH22580-PA 793 GH22580-PA 103..547 239..684 1587 67.6 Plus
Dgri\GH24775-PA 977 GH24775-PA 193..628 236..665 1471 62.2 Plus
Dgri\GH18325-PA 684 GH18325-PA 134..647 172..664 927 39.6 Plus
Dgri\GH17046-PA 811 GH17046-PA 238..726 230..717 891 39.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:49
Subject Length Description Subject Range Query Range Score Percent Strand
Rm62-PA 719 CG10279-PA 1..719 1..719 3784 100 Plus
Rm62-PF 578 CG10279-PF 3..578 144..719 3047 99.8 Plus
Rm62-PB 578 CG10279-PB 3..578 144..719 3047 99.8 Plus
Rm62-PC 578 CG10279-PC 3..578 144..719 3047 99.8 Plus
Rm62-PH 575 CG10279-PH 1..575 145..719 3046 100 Plus
Rm62-PD 575 CG10279-PD 1..575 145..719 3046 100 Plus
Rm62-PI 578 CG10279-PI 5..578 146..719 3041 100 Plus
Rm62-PE 578 CG10279-PE 5..578 146..719 3041 100 Plus
Rm62-PL 473 CG10279-PL 1..453 145..597 2382 99.6 Plus
Rm62-PK 485 CG10279-PK 1..451 145..595 2380 100 Plus
Rm62-PM 478 CG10279-PM 1..451 145..595 2376 99.8 Plus
Rm62-PJ 458 CG10279-PJ 1..450 145..594 2374 100 Plus
CG10077-PD 818 CG10077-PD 11..604 152..719 1694 59.2 Plus
CG10077-PA 818 CG10077-PA 11..604 152..719 1694 59.2 Plus
mahe-PC 945 CG10777-PC 89..652 159..690 1447 53.2 Plus
mahe-PB 945 CG10777-PB 89..652 159..690 1447 53.2 Plus
CG10077-PC 472 CG10077-PC 11..468 152..594 1372 62.6 Plus
CG7878-PA 703 CG7878-PA 158..690 162..690 1005 41.7 Plus
bel-PA 798 CG9748-PA 117..766 149..711 938 38.1 Plus
bel-PB 801 CG9748-PB 117..749 149..710 938 38.2 Plus
CG6227-PA 1224 CG6227-PA 459..917 234..693 883 41.2 Plus
CG6418-PB 791 CG6418-PB 215..691 230..691 850 40.3 Plus
vas-PC 661 CG46283-PC 90..644 149..686 812 36 Plus
vas-PB 661 CG46283-PB 90..644 149..686 812 36 Plus
vas-PA 661 CG46283-PA 90..644 149..686 812 36 Plus
CG10333-PA 822 CG10333-PA 376..775 264..639 739 39.9 Plus
abs-PA 619 CG14637-PA 148..586 253..683 732 37.9 Plus
CG14443-PB 736 CG14443-PB 280..719 227..669 715 36.3 Plus
eIF4A-PF 403 CG9075-PF 31..398 282..666 547 33.7 Plus
eIF4A-PE 403 CG9075-PE 31..398 282..666 547 33.7 Plus
eIF4A-PD 403 CG9075-PD 31..398 282..666 547 33.7 Plus
eIF4A-PB 403 CG9075-PB 31..398 282..666 547 33.7 Plus
eIF4A-PC 403 CG9075-PC 31..398 282..666 547 33.7 Plus
eIF4A-PA 403 CG9075-PA 31..398 282..666 547 33.7 Plus
Rs1-PB 782 CG2173-PB 73..526 195..656 533 32.8 Plus
Rs1-PA 782 CG2173-PA 73..526 195..656 533 32.8 Plus
CG7483-PA 399 CG7483-PA 25..394 280..666 521 33.3 Plus
CG9253-PA 507 CG9253-PA 81..503 301..695 512 32.9 Plus
me31B-PB 428 CG4916-PB 28..398 282..660 486 32.1 Plus
me31B-PA 459 CG4916-PA 59..429 282..660 486 32.1 Plus
CG32344-PA 827 CG32344-PA 41..389 283..638 447 28.4 Plus
Dbp45A-PA 521 CG12759-PA 9..355 283..634 440 33 Plus
CG8611-PC 828 CG8611-PC 352..769 305..645 431 30 Plus
CG8611-PA 974 CG8611-PA 351..768 305..645 431 30 Plus
CG8611-PB 975 CG8611-PB 352..769 305..645 431 30 Plus
CG5589-PA 594 CG5589-PA 93..488 260..652 427 29.4 Plus
pit-PC 680 CG6375-PC 199..532 293..628 427 30.8 Plus
pit-PA 680 CG6375-PA 199..532 293..628 427 30.8 Plus
pit-PB 680 CG6375-PB 199..532 293..628 427 30.8 Plus
CG5800-PA 826 CG5800-PA 13..452 206..651 417 28.3 Plus
Hlc-PB 560 CG1666-PB 3..393 275..640 399 29.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23184-PA 724 GI23184-PA 1..665 1..670 2679 81.4 Plus
Dmoj\GI12524-PA 602 GI12524-PA 28..494 191..666 1783 71.4 Plus
Dmoj\GI12369-PA 794 GI12369-PA 100..543 239..684 1598 68 Plus
Dmoj\GI14822-PA 963 GI14822-PA 190..624 236..665 1483 63.2 Plus
Dmoj\GI23306-PA 702 GI23306-PA 116..668 136..664 937 38.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23489-PA 649 GL23489-PA 148..594 224..670 2285 95.1 Plus
Dper\GL16096-PA 554 GL16096-PA 9..551 189..702 1711 62.7 Plus
Dper\GL13229-PA 455 GL13229-PA 56..453 205..594 1356 67.2 Plus
Dper\GL15249-PA 688 GL15249-PA 1..376 296..666 1318 64.1 Plus
Dper\GL24257-PA 703 GL24257-PA 243..650 236..665 901 41 Plus
Dper\GL23489-PA 649 GL23489-PA 1..150 1..145 265 47.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:22:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10214-PA 738 GA10214-PA 1..685 1..670 2570 79.6 Plus
Dpse\GA28491-PA 537 GA28491-PA 9..534 189..702 1774 65.8 Plus
Dpse\GA28589-PA 799 GA28589-PA 56..523 205..664 1619 66.8 Plus
Dpse\GA10556-PA 939 GA10556-PA 192..628 236..666 1452 61.6 Plus
Dpse\GA20653-PB 692 GA20653-PB 200..639 236..665 963 43.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10578-PA 724 GM10578-PA 1..724 1..719 3693 97.5 Plus
Dsec\GM11962-PA 946 GM11962-PA 192..653 236..690 1468 60 Plus
Dsec\GM13808-PA 672 GM13808-PA 97..399 353..670 1169 69.5 Plus
Dsec\GM23704-PA 699 GM23704-PA 216..655 236..665 996 45.4 Plus
Dsec\GM20179-PA 1214 GM20179-PA 450..881 234..663 895 42.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13105-PA 814 GD13105-PA 87..541 214..670 1613 67 Plus
Dsim\GD16140-PA 800 GD16140-PA 192..653 236..690 1463 60 Plus
Dsim\GD18514-PA 713 GD18514-PA 230..669 236..665 1000 45.1 Plus
Dsim\GD17585-PA 786 GD17585-PA 212..662 230..675 870 41.1 Plus
Dsim\GD15121-PA 163 GD15121-PA 1..155 440..594 825 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14499-PA 733 GJ14499-PA 1..671 1..670 2639 80.1 Plus
Dvir\GJ16043-PA 605 GJ16043-PA 40..507 191..667 1707 68.1 Plus
Dvir\GJ12262-PA 778 GJ12262-PA 18..542 172..683 1598 62 Plus
Dvir\GJ19487-PA 953 GJ19487-PA 191..627 236..665 1470 62.2 Plus
Dvir\GJ24162-PA 710 GJ24162-PA 241..680 236..665 954 43 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:22:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14214-PA 745 GK14214-PA 1..693 1..670 2627 78.2 Plus
Dwil\GK12550-PA 800 GK12550-PA 90..524 238..677 1615 69.4 Plus
Dwil\GK16276-PA 950 GK16276-PA 195..632 236..666 1466 61.2 Plus
Dwil\GK14378-PA 683 GK14378-PA 204..642 236..664 956 44.3 Plus
Dwil\GK20023-PA 1234 GK20023-PA 478..895 234..649 884 43 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:22:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24123-PA 719 GE24123-PA 1..672 1..670 2982 94.1 Plus
Dyak\GE20460-PA 818 GE20460-PA 86..543 214..670 1616 66.7 Plus
Dyak\GE17497-PA 962 GE17497-PA 193..715 236..719 1445 55.3 Plus
Dyak\GE25850-PA 688 GE25850-PA 210..674 236..705 959 42 Plus
Dyak\GE17181-PA 1215 GE17181-PA 451..882 234..663 899 42.6 Plus

RE11923.hyp Sequence

Translation from 103 to 2262

> RE11923.hyp
MLKLVQYIAPRVGGATPRPTACGWGNLLLISPRSGASSEKCITQRRHFLF
SSASSSGTFASSSSLCTEQRQQFHGSRRNRETILFPSTYSSLQAQSQRAF
RDSSKPDSDDYVDSIPKAEQRTRTRKSLFNDPDERTEEIKIEGVMAPHDR
DFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRR
DDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKNFYQEH
PNVANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQG
YKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQ
RGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRD
LQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIR
KIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNI
RQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFI
RSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIK
YVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLR
EANQEINPALENLARNSRYDGGGGRSRYGGGGGGGRFGGGGFKKGSLSNG
RGFGGGGGGGGEGRHSRFD*

RE11923.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
Rm62-PA 719 CG10279-PA 1..719 1..719 3784 100 Plus
Rm62-PF 578 CG10279-PF 3..578 144..719 3047 99.8 Plus
Rm62-PB 578 CG10279-PB 3..578 144..719 3047 99.8 Plus
Rm62-PC 578 CG10279-PC 3..578 144..719 3047 99.8 Plus
Rm62-PH 575 CG10279-PH 1..575 145..719 3046 100 Plus