Clone RE12330 Report

Search the DGRC for RE12330

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:123
Well:30
Vector:pFlc-1
Associated Gene/Transcripttara-RA
Protein status:RE12330.pep: gold
Preliminary Size:2737
Sequenced Size:3952

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6889 2002-01-01 Sim4 clustering to Release 2
CG6889 2003-01-01 Sim4 clustering to Release 3
CG6889 2005-01-26 Blastp of sequenced clone
tara 2008-04-29 Release 5.5 accounting
tara 2008-08-15 Release 5.9 accounting
tara 2008-12-18 5.12 accounting

Clone Sequence Records

RE12330.complete Sequence

3952 bp (3952 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021316

> RE12330.complete
AGTTCGAACTCTGCACTTCGCACAACAAGACGCCAAGCGACCAGCGACGA
CGACGCCAAAGGCGCTCGGCCAAAGCCACAGAGCCCGAGCAAAAACTACG
TAAATTTTCCACAGCGATTTTCCCCATTTTTCCCAGTTGAACAACAGCGC
CAAAAACAAAAACATCGGACCAGCGGTCTGCATGTGTGTTTGTGCCAGAG
CGTGTGTGTTTTGTGTGTGTTATATAGTGAATCGTTCTTGGCCCGACGAT
CGACTTCCCCATCACCCTCAAACCCGCAAACATGTGGAGCTGGGGCTAAG
GAACACCACGGAACCCAAAACAACCAGCGACTCAGAAAAAGGCGCCAAAC
TTAAATTATTGCCAGCCGAGATTACCTCCTCAAGACTTCGCAGGAAACCA
TGAAAATGTGGACGGAATCCAATGTGAATTCCGCGATGGGTCTTCAAGCA
ACAGCCGCCACCAAGCGGAAGCATGAGCTGACCTTCGACAGCAAGGATGC
CAACACCACCTACACGGGCAACTGTGCCCCGCCCCCCGTCAAGGCCAACA
AGTGGGCCATCAGCAACAACAACTACCTGGAGTCGCTCGAGGAGCAGCAG
CAGCAACAGCAATCGCCATCGGAGCCAGCTGTTGAGTCCAACAACAACCA
CATTGTTTTAGAAGCATCAATGGATGCGTTGAAGCCAACGGAGCCAAGTA
TTAGCAATGGTCATGAAGTTACTACCGCCGTCGCAGCAATGAAAAGTCAA
GCGGAGGTGCCACTCCCGCCAACAGCGAGTGCGGCGATACCGGAGGACAG
TATCGCCAGGTTAGAGGTGGTCACCTCAGCCGTTCCTTGTGAGCCCTGGA
CGAGCAATGGGCCCACTACTCCTTCCGCGGTGGCAGGACCCGCAGCATCC
GCGGAACCTGTGGATTGCATCTCCAAGCTGCAGGCCGTCGCGGTGCCCAG
TGATCCTTGGGGTAGCATTGCCACCCGCTCCACTCTGGCAACGACTTTGC
TCAGTGCCGATGAGCTGGACGACGATGATGATGATTTTGAGGACGACTAC
GAGGAGGAGGAGAGCATCATACCCACCTACTGTCCCATGCGCTATCATCC
CTTTGTACCGCATCCGCACCCTCATTCGCACCAGCTGCCGTCCCATCCCC
ACCAGCAGCAGCCGCAGCAGCTCTCCCAACAACAACCACATCCCCAGCAG
CAGCAACTCGCCCAGCAGCAGCAACAACATCCGCAGCAGCAGCGAAGCTA
TGCCCCCGGATATGGGAGCAGGCAACCCAACTACTATTCGGAGCCTTTCC
CGCAGCAGAATTGCTCGCGGACAGGAGGACCGCAGCACATGACGCAATCA
CCGCCAACACCGCAGCAGGCGCGTGGTTTCGCTCCACCCCAGTGGGCGAC
AGCGGGTAGCAGTCCGGCCAATCCCTCATCGGGAGCCCAACAGTTCTACG
AGCCGACCAACGGTGGAGCTTATGCCCCGCCAGCGGCGCCCCAGCAGACA
ATTCGTTGTGCAGAGAACGGCAAATCCTATCTGGACCTGGGCTGCAGCAG
TGGCGCATCCGGAAATGCTGGAGGATCGCCCATCAGTCCGCCGCCCTCAT
CAGCGCCTGTTGTTCCATTCGCCGGCTTGCCTCTCCATGGCCTGCCTCTT
AAAAGGTGCTGCGATGGACGACCCGGTGGCTGGTGCAGTGCCAACAGGAG
TTGCTACAAGGACACGCGCCTGAAGATACGCAATCTGTCCATGTTCAAAC
TCTCCCGTTTCCGGCAGGTTTCTGAGCAGTCGCTGTACCGCTCGGTGCTC
ATTTGCAATACGCTGAAGCGCATTGATCGGGAGATCGAAGCAGAGGCCAA
GGAGCTGCACCAGGCGGCGCAACAGCACCACCAACAGGCGGCAGCAGCAG
CAGCCGCAGCAGCAGCAGCGGCGGCACAAGCGGCTCAGTACCACCCAGCC
TACCAGCAGCAGCAGCAGCAGCAGCAATCCCCGCCAGCACCTCTGCATCC
ACATACGCAGCAGCAGATGGACTATGCGCCCGTGTTGAACTGTGCTCGTT
TGGCCAACATGGATCACTACCAGCAACTCAGTTTCCAGCCCCAACACCAG
CAGCAACAGCAGCCTTCGCAGCCGCATAGCTACCACGAGCGTCTGGACAG
CCAACCCGCCTACAGGGGCGCGGCAGCGGGTGCGGGCAGCTTCGCCACGC
AGCCGAGCAACTGTGATACATCAGCGGGTGCAAGTAGCAGCAATACCAGC
GGCAACAGCAACAACTCCTCAGCGACGGCGGCGAGCAGCAACAGTAGTTT
GCACCCCTACGATCACTATCCCTTTCGGGAGTCGCAATCTGGTCGAGCAA
CGCCCTTTCCGGCCTGCCCCACCACAACAGCAGCAGCGGCAGCAGCTTCG
GCAGCAGCCGCAGCTTCCAGTGGAGGAGCAGCAACAACACTAAGTAGCAA
CATCAGCAGCTCCCCCGCATCAAGCAGCACTAGCAGCAACACCACTTCCT
CAACGGTGATCAGCAGCAGTAGTGGGAATACCGTGAGCAGCAACGGCACC
ACGCCAGTTGCACCTACCGCAAGCAGCAGCAACTGCGATACTAGCGATTC
GGGTTATGCGGACGACGACTCCACGCGATCCATCAACTGGAGTTCGGTGC
TGAGCCTCAGTTCGCAATCGGCGTTGGATCCGCTCAACAACAACGATTTG
TTTAGCATACTTCCGTCGGCGGCCACACCTACAGCGGTGCCAGTTTCAGT
GCCAGCCAGTAGTTCCAGTTCCTCCTCGGGGTCCACGCTGGCATTCAGTG
GAAGCTTCACCACCGTACAAGCCAGCGGCGGCAGTAGCAGTTCCTGCGGA
AGCAGCTCCACCACCGCCACATTCACCACCCTGTCGACCATCTCCTCGGC
CACCCACTCGCTGACCTCGTCGTATGTAAGCAGCATTAGCTCCAATGTGT
CGGCGGGCGCCAATACCTGGGAGTACGGATTCCTGGACATGGAATTCGGA
CTCGGTTCGGAGTTCACGGAGCTGGTACCCAGCTGTAAGCTCAGCTCCGA
GGATCTGTTCAAGAGCGGATTGGGCGGTCAGGTTGTGACCGCCTCCCGCC
TGCACGACAACGAACTGGAGCACCCGGCCCACATCATGGTCGGTAGTTAG
TATCAGTTGTAGACGATGACGGCGACGGATCCCCAGCGGATGGCGGCGTG
CTGGTCGCGTCGCCTGCTGGCGCCCACTAGCAATTCCAAGCAGTATTGAA
TCGACGAAATGGGGGAGGGGCTGAGGGGATGTTAAATGCTAATTGTGCTC
AGGTTGTGAACGTGCATGAGAATATAAATATATACATATATTCGAAAGTC
TTGGTCCTAAATACCCCTCTCCCCCTTCCTTCACACAAGCAATCGGGGAC
ACAAATTAATTGCAATCTTTAATGAAATTCTTAAGAGAGATCGAAGAAAT
GGCAGAACAATGAATATGACAAATGAGCAAGCAAAACTATTAGCAAATTT
TTCTAAGTGTAAATATTATTAGTTTTAAGGCAAAACAGCGAACTCCTAGC
CAAGTAAGTTTGAAACGGAAGCAAAACAAAATTCTATATTAGCGTAACTT
TAGCATTGTTAGTTGCAATTGTTGCAGTTTTTCGATTCAACACCACACAA
GAACAACAACAGCATCAAATCGAACAACAAAAGGCCGTTGGAAATTTTTC
AAAACCCAAATCAATTAACAAAATTTACGTTTACGTTACGTTTACGTTGG
CCTAAAGACGATGCAGCATTTGGCTTGCAAGGAGAAATTGATGAAAAATC
GAAAAACGTTTACTATATTACTAGCCATAAGTATTATTATTTATATACAA
AACCGCAGAAAACAAACAAACAAAAGAACAACTTAAAACAAAGTTTTATA
AAAGAAAAAACAACCGAAAAAAAACACAAAAATAACAAAAAAAAAAAAAA
AA

RE12330.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
tara-RA 4328 tara-RA 369..4318 1..3950 19705 99.9 Plus
tara-RB 4155 tara-RB 597..4123 424..3950 17605 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12081416..12084928 424..3936 17520 99.9 Plus
chr3R 27901430 chr3R 12050632..12051058 1..427 2120 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:34:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16256778..16260304 424..3950 17605 99.9 Plus
3R 32079331 3R 16226017..16226443 1..427 2120 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15997609..16001135 424..3950 17605 99.9 Plus
3R 31820162 3R 15966848..15967274 1..427 2120 99.7 Plus
Blast to na_te.dros performed 2019-03-16 04:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2292..3014 1843..2600 381 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2401..2982 1853..2460 377 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2980 1909..2590 328 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2552 2364..2599 322 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6749..6926 2372..2553 298 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2664 2233..2583 293 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6934 2385..2600 284 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2526 2380..2595 272 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..7112 2086..2490 243 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2352..2539 2364..2551 240 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6995 2229..2504 240 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6872 2443..2595 226 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..7036 1951..2275 220 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2685 2086..2478 218 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2859 2086..2586 212 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6843 1892..2015 209 68.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6533..7071 2092..2615 208 54.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..7007 2218..2490 208 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..7028 2186..2504 202 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2352..2665 2219..2551 189 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6700..6920 432..648 175 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2421 2473..2583 166 65.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2620..2973 1952..2298 166 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2318..2431 545..652 160 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6798..6866 2233..2298 157 73.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2485 446..630 151 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..7008 2063..2266 150 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6812 2509..2586 145 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..6852 540..652 143 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6901 462..650 141 56.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..7217 2055..2506 141 55 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6916 558..670 133 62 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1527..1584 2055..2113 130 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6826 492..612 130 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6919 546..739 129 56.3 Plus
roo 9092 roo DM_ROO 9092bp 1087..1142 2061..2113 128 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6692..6772 529..612 124 65.9 Plus
looper1 1881 looper1 LOOPER1_DM 1881bp 1783..1875 3477..3571 119 60 Plus

RE12330.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:45:07 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12050632..12051054 1..423 99 -> Plus
chr3R 12081416..12082141 424..1149 99 == Plus
chr3R 12082236..12082860 1244..1868 100 == Plus
chr3R 12082969..12083224 1977..2232 100 == Plus
chr3R 12083290..12083366 2298..2374 100 == Plus
chr3R 12083453..12084850 2461..3858 99 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:46:39 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 1..2751 400..3150 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:12:52 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 1..2751 400..3150 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:41:10 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 1..2751 400..3150 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:57:22 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 1..2751 400..3150 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:50:07 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 1..2751 400..3150 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:46:39 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 369..4284 1..3916 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:12:52 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 369..4284 1..3916 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:41:10 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 369..4284 1..3916 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:57:23 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 369..4284 1..3916 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:50:07 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
tara-RA 367..4282 1..3916 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:07 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16226017..16226439 1..423 99 -> Plus
3R 16256778..16260270 424..3916 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:07 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16226017..16226439 1..423 99 -> Plus
3R 16256778..16260270 424..3916 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:07 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16226017..16226439 1..423 99 -> Plus
3R 16256778..16260270 424..3916 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:41:10 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12051739..12052161 1..423 99 -> Plus
arm_3R 12082500..12085992 424..3916 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:32:48 Download gff for RE12330.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15966848..15967270 1..423 99 -> Plus
3R 15997609..16001101 424..3916 100   Plus

RE12330.pep Sequence

Translation from 399 to 3149

> RE12330.pep
MKMWTESNVNSAMGLQATAATKRKHELTFDSKDANTTYTGNCAPPPVKAN
KWAISNNNYLESLEEQQQQQQSPSEPAVESNNNHIVLEASMDALKPTEPS
ISNGHEVTTAVAAMKSQAEVPLPPTASAAIPEDSIARLEVVTSAVPCEPW
TSNGPTTPSAVAGPAASAEPVDCISKLQAVAVPSDPWGSIATRSTLATTL
LSADELDDDDDDFEDDYEEEESIIPTYCPMRYHPFVPHPHPHSHQLPSHP
HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAPGYGSRQPNYYSEPF
PQQNCSRTGGPQHMTQSPPTPQQARGFAPPQWATAGSSPANPSSGAQQFY
EPTNGGAYAPPAAPQQTIRCAENGKSYLDLGCSSGASGNAGGSPISPPPS
SAPVVPFAGLPLHGLPLKRCCDGRPGGWCSANRSCYKDTRLKIRNLSMFK
LSRFRQVSEQSLYRSVLICNTLKRIDREIEAEAKELHQAAQQHHQQAAAA
AAAAAAAAAQAAQYHPAYQQQQQQQQSPPAPLHPHTQQQMDYAPVLNCAR
LANMDHYQQLSFQPQHQQQQQPSQPHSYHERLDSQPAYRGAAAGAGSFAT
QPSNCDTSAGASSSNTSGNSNNSSATAASSNSSLHPYDHYPFRESQSGRA
TPFPACPTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTS
STVISSSSGNTVSSNGTTPVAPTASSSNCDTSDSGYADDDSTRSINWSSV
LSLSSQSALDPLNNNDLFSILPSAATPTAVPVSVPASSSSSSSGSTLAFS
GSFTTVQASGGSSSSCGSSSTTATFTTLSTISSATHSLTSSYVSSISSNV
SAGANTWEYGFLDMEFGLGSEFTELVPSCKLSSEDLFKSGLGGQVVTASR
LHDNELEHPAHIMVGS*

RE12330.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:56:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23054-PA 921 GF23054-PA 1..921 1..916 2483 76.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16988-PA 913 GG16988-PA 1..913 1..916 3114 95.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18775-PA 921 GH18775-PA 278..921 282..916 1444 61.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
tara-PA 916 CG6889-PA 1..916 1..916 4782 100 Plus
tara-PB 912 CG6889-PB 3..912 7..916 4737 99.8 Plus
Mur29B-PA 555 CG31901-PA 212..475 591..856 215 30.3 Plus
cpo-PY 606 CG43738-PY 189..416 480..706 213 30.2 Plus
cpo-PX 606 CG43738-PX 189..416 480..706 213 30.2 Plus
cpo-PW 606 CG43738-PW 189..416 480..706 213 30.2 Plus
cpo-PU 606 CG43738-PU 189..416 480..706 213 30.2 Plus
cpo-PN 606 CG43738-PN 189..416 480..706 213 30.2 Plus
cpo-PV 607 CG43738-PV 189..416 480..706 213 30.2 Plus
cpo-PT 607 CG43738-PT 189..416 480..706 213 30.2 Plus
cpo-PO 748 CG43738-PO 189..416 480..706 213 30.2 Plus
cpo-PR 749 CG43738-PR 189..416 480..706 213 30.2 Plus
cpo-PQ 762 CG43738-PQ 189..416 480..706 213 30.2 Plus
cpo-PP 841 CG43738-PP 189..416 480..706 213 30.2 Plus
cpo-PS 962 CG43738-PS 189..416 480..706 213 30.2 Plus
Mur29B-PA 555 CG31901-PA 156..469 583..883 210 27.6 Plus
Mur29B-PA 555 CG31901-PA 148..410 591..856 209 28.1 Plus
Mur29B-PA 555 CG31901-PA 116..378 591..856 208 28.4 Plus
wrd-PA 951 CG7913-PA 21..339 510..856 203 25.4 Plus
wrd-PB 984 CG7913-PB 21..339 510..856 203 25.4 Plus
Ppn-PC 2174 CG33103-PC 925..1178 595..853 201 29.6 Plus
Ppn-PF 2776 CG33103-PF 925..1178 595..853 201 29.6 Plus
Ppn-PG 2841 CG33103-PG 925..1178 595..853 201 29.6 Plus
Ppn-PE 2898 CG33103-PE 925..1178 595..853 201 29.6 Plus
Mur29B-PA 555 CG31901-PA 92..346 599..856 198 27.9 Plus
cpo-PY 606 CG43738-PY 158..440 487..740 197 27.3 Plus
cpo-PX 606 CG43738-PX 158..440 487..740 197 27.3 Plus
cpo-PW 606 CG43738-PW 158..440 487..740 197 27.3 Plus
cpo-PU 606 CG43738-PU 158..440 487..740 197 27.3 Plus
cpo-PN 606 CG43738-PN 158..440 487..740 197 27.3 Plus
cpo-PV 607 CG43738-PV 158..440 487..740 197 27.3 Plus
cpo-PT 607 CG43738-PT 158..440 487..740 197 27.3 Plus
cpo-PO 748 CG43738-PO 158..440 487..740 197 27.3 Plus
cpo-PR 749 CG43738-PR 158..440 487..740 197 27.3 Plus
cpo-PQ 762 CG43738-PQ 158..440 487..740 197 27.3 Plus
cpo-PP 841 CG43738-PP 158..440 487..740 197 27.3 Plus
cpo-PS 962 CG43738-PS 158..440 487..740 197 27.3 Plus
CG46026-PA 666 CG46026-PA 186..428 599..856 196 23.3 Plus
Ppn-PC 2174 CG33103-PC 749..1028 564..856 192 26.9 Plus
Ppn-PF 2776 CG33103-PF 749..1028 564..856 192 26.9 Plus
Ppn-PG 2841 CG33103-PG 749..1028 564..856 192 26.9 Plus
Ppn-PE 2898 CG33103-PE 749..1028 564..856 192 26.9 Plus
CG46026-PA 666 CG46026-PA 404..666 602..856 192 25.1 Plus
nej-PE 3266 CG15319-PE 1226..1553 484..820 192 27.7 Plus
nej-PB 3276 CG15319-PB 1226..1553 484..820 192 27.7 Plus
nej-PD 3276 CG15319-PD 1226..1553 484..820 192 27.7 Plus
nej-PC 3282 CG15319-PC 1232..1559 484..820 192 27.7 Plus
Muc68D-PB 1514 CG6004-PB 435..828 520..905 191 23 Plus
Muc68D-PB 1514 CG6004-PB 500..881 488..856 191 20.9 Plus
Mur29B-PA 555 CG31901-PA 90..309 606..848 190 30.5 Plus
CG46026-PA 666 CG46026-PA 268..528 602..856 190 24.3 Plus
Mur29B-PA 555 CG31901-PA 87..282 658..856 188 31.5 Plus
Mur29B-PA 555 CG31901-PA 108..356 607..856 188 27.4 Plus
Alh-PF 1165 CG1070-PF 486..994 238..797 187 23.6 Plus
Alh-PP 1717 CG1070-PP 1038..1546 238..797 187 23.6 Plus
Vml-PB 578 CG34333-PB 28..526 204..745 186 23.5 Plus
Vml-PA 578 CG34333-PA 28..526 204..745 186 23.5 Plus
CG43347-PD 2652 CG43347-PD 9..217 519..734 186 27.1 Plus
CG43347-PB 2666 CG43347-PB 9..217 519..734 186 27.1 Plus
CG43347-PC 2684 CG43347-PC 9..217 519..734 186 27.1 Plus
CG46026-PA 666 CG46026-PA 319..586 602..856 185 23.5 Plus
CG46026-PA 666 CG46026-PA 387..632 602..856 185 22.4 Plus
Muc91C-PB 949 CG7709-PB 616..908 572..856 185 28.3 Plus
Muc91C-PA 950 CG7709-PA 617..909 572..856 185 28.3 Plus
btd-PA 644 CG12653-PA 5..244 511..737 184 27.2 Plus
Muc91C-PB 949 CG7709-PB 589..870 593..853 182 29.3 Plus
Muc91C-PA 950 CG7709-PA 590..871 593..853 182 29.3 Plus
nej-PE 3266 CG15319-PE 1200..1545 488..796 181 26.6 Plus
nej-PB 3276 CG15319-PB 1200..1545 488..796 181 26.6 Plus
nej-PD 3276 CG15319-PD 1200..1545 488..796 181 26.6 Plus
nej-PC 3282 CG15319-PC 1206..1551 488..796 181 26.6 Plus
lig-PJ 1079 CG8715-PJ 629..1031 521..870 181 27 Plus
lig-PI 1300 CG8715-PI 629..1031 521..870 181 27 Plus
lig-PH 1330 CG8715-PH 629..1031 521..870 181 27 Plus
lig-PG 1332 CG8715-PG 629..1031 521..870 181 27 Plus
lig-PF 1332 CG8715-PF 629..1031 521..870 181 27 Plus
lig-PE 1332 CG8715-PE 629..1031 521..870 181 27 Plus
lig-PB 1332 CG8715-PB 629..1031 521..870 181 27 Plus
lig-PA 1343 CG8715-PA 629..1031 521..870 181 27 Plus
lig-PC 1343 CG8715-PC 629..1031 521..870 181 27 Plus
lig-PD 1375 CG8715-PD 629..1031 521..870 181 27 Plus
Mur29B-PA 555 CG31901-PA 242..485 591..838 179 26.8 Plus
Rbfox1-PF 763 CG32062-PF 517..709 489..681 179 33.5 Plus
Rbfox1-PL 858 CG32062-PL 534..726 489..681 179 33.5 Plus
Rbfox1-PE 865 CG32062-PE 516..829 489..829 179 23.3 Plus
Rbfox1-PJ 889 CG32062-PJ 583..775 489..681 179 33.5 Plus
CG46026-PA 666 CG46026-PA 190..445 599..856 177 24.7 Plus
Muc68D-PB 1514 CG6004-PB 428..729 597..905 177 25.7 Plus
CG46026-PA 666 CG46026-PA 133..366 593..845 176 22.7 Plus
Muc68D-PB 1514 CG6004-PB 694..928 595..855 176 28.9 Plus
Alh-PP 1717 CG1070-PP 286..592 591..853 176 25.7 Plus
CG46026-PA 666 CG46026-PA 251..496 602..856 175 23.6 Plus
Muc68D-PB 1514 CG6004-PB 277..1054 5..856 174 18.7 Plus
Muc91C-PB 949 CG7709-PB 526..780 573..853 174 29 Plus
Muc91C-PA 950 CG7709-PA 527..781 573..853 174 29 Plus
Ppn-PC 2174 CG33103-PC 803..1067 599..856 171 25.5 Plus
Ppn-PF 2776 CG33103-PF 803..1067 599..856 171 25.5 Plus
Ppn-PG 2841 CG33103-PG 803..1067 599..856 171 25.5 Plus
Ppn-PE 2898 CG33103-PE 803..1067 599..856 171 25.5 Plus
Alh-PP 1717 CG1070-PP 450..705 597..852 171 26.5 Plus
Ppn-PC 2174 CG33103-PC 987..1255 599..892 167 25.1 Plus
Ppn-PF 2776 CG33103-PF 987..1255 599..892 167 25.1 Plus
Ppn-PG 2841 CG33103-PG 987..1255 599..892 167 25.1 Plus
Ppn-PE 2898 CG33103-PE 987..1255 599..892 167 25.1 Plus
Muc68D-PB 1514 CG6004-PB 340..1121 5..833 167 17.9 Plus
Vml-PB 578 CG34333-PB 133..506 490..853 166 25.4 Plus
Vml-PB 578 CG34333-PB 197..520 490..845 166 26.3 Plus
Vml-PA 578 CG34333-PA 133..506 490..853 166 25.4 Plus
Vml-PA 578 CG34333-PA 197..520 490..845 166 26.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22666-PA 941 GI22666-PA 1..665 1..656 1552 62.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12361-PA 937 GL12361-PA 1..377 9..382 1102 72.3 Plus
Dper\GL12361-PA 937 GL12361-PA 734..937 723..916 535 75.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19931-PB 962 GA19931-PB 1..962 1..916 2233 68.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15140-PA 910 GM15140-PA 1..910 3..916 4680 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19083-PA 914 GD19083-PA 1..914 1..916 4733 98.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23393-PA 907 GJ23393-PA 1..637 1..656 1652 67.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:57:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14470-PA 957 GK14470-PA 8..648 5..653 1359 57.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24381-PA 914 GE24381-PA 1..914 1..916 4627 96.3 Plus

RE12330.hyp Sequence

Translation from 399 to 3149

> RE12330.hyp
MKMWTESNVNSAMGLQATAATKRKHELTFDSKDANTTYTGNCAPPPVKAN
KWAISNNNYLESLEEQQQQQQSPSEPAVESNNNHIVLEASMDALKPTEPS
ISNGHEVTTAVAAMKSQAEVPLPPTASAAIPEDSIARLEVVTSAVPCEPW
TSNGPTTPSAVAGPAASAEPVDCISKLQAVAVPSDPWGSIATRSTLATTL
LSADELDDDDDDFEDDYEEEESIIPTYCPMRYHPFVPHPHPHSHQLPSHP
HQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAPGYGSRQPNYYSEPF
PQQNCSRTGGPQHMTQSPPTPQQARGFAPPQWATAGSSPANPSSGAQQFY
EPTNGGAYAPPAAPQQTIRCAENGKSYLDLGCSSGASGNAGGSPISPPPS
SAPVVPFAGLPLHGLPLKRCCDGRPGGWCSANRSCYKDTRLKIRNLSMFK
LSRFRQVSEQSLYRSVLICNTLKRIDREIEAEAKELHQAAQQHHQQAAAA
AAAAAAAAAQAAQYHPAYQQQQQQQQSPPAPLHPHTQQQMDYAPVLNCAR
LANMDHYQQLSFQPQHQQQQQPSQPHSYHERLDSQPAYRGAAAGAGSFAT
QPSNCDTSAGASSSNTSGNSNNSSATAASSNSSLHPYDHYPFRESQSGRA
TPFPACPTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTS
STVISSSSGNTVSSNGTTPVAPTASSSNCDTSDSGYADDDSTRSINWSSV
LSLSSQSALDPLNNNDLFSILPSAATPTAVPVSVPASSSSSSSGSTLAFS
GSFTTVQASGGSSSSCGSSSTTATFTTLSTISSATHSLTSSYVSSISSNV
SAGANTWEYGFLDMEFGLGSEFTELVPSCKLSSEDLFKSGLGGQVVTASR
LHDNELEHPAHIMVGS*

RE12330.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
tara-PA 916 CG6889-PA 1..916 1..916 4782 100 Plus
tara-PB 912 CG6889-PB 3..912 7..916 4737 99.8 Plus
Mur29B-PA 555 CG31901-PA 212..475 591..856 215 30.3 Plus
cpo-PY 606 CG43738-PY 189..416 480..706 213 30.2 Plus
cpo-PX 606 CG43738-PX 189..416 480..706 213 30.2 Plus
Mur29B-PA 555 CG31901-PA 156..469 583..883 210 27.6 Plus
Mur29B-PA 555 CG31901-PA 148..410 591..856 209 28.1 Plus
Mur29B-PA 555 CG31901-PA 116..378 591..856 208 28.4 Plus
Mur29B-PA 555 CG31901-PA 92..346 599..856 198 27.9 Plus
cpo-PY 606 CG43738-PY 158..440 487..740 197 27.3 Plus
Mur29B-PA 555 CG31901-PA 90..309 606..848 190 30.5 Plus
Mur29B-PA 555 CG31901-PA 87..282 658..856 188 31.5 Plus
Mur29B-PA 555 CG31901-PA 108..356 607..856 188 27.4 Plus
Mur29B-PA 555 CG31901-PA 242..485 591..838 179 26.8 Plus