Clone RE12383 Report

Search the DGRC for RE12383

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:123
Well:83
Vector:pFlc-1
Associated Gene/TranscriptSu(var)2-HP2-RB
Protein status:RE12383.pep: gold
Sequenced Size:5452

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Su(var)2-HP2 2008-04-29 Picked prior to 5.5
Su(var)2-HP2 2008-12-18 5.12 accounting

Clone Sequence Records

RE12383.complete Sequence

5452 bp assembled on 2008-09-10

GenBank Submission: BT044474.1

> RE12383.complete
GTACAACGTTCACGTTAATTGCAGCGGCATCATCTTTGCTGGATTTCAAA
GGAATATTTTGCGGTGAAAAGAACGAAAAAGTGCTTGCATTTGTGCGCTA
ATGGGTATATGAGGTCCTTCTGCTAAAGGAATGCCAAGTCATACAAACTT
TTCGCGATTCGCCTTAATGGAAATAGATAAGACGCGGCGCAGTTGAAAGA
TTGCAAATTGATCCACCGATCGACCGACGCACATGAAAAGTGAAGTATGG
AGGACATTGAATATTTAGACGAGTACAAAGACTTGGTGCTGCCAGGGATT
AAATCGAGTGCTCCGACAGCATCTTCTGCCGGCGTTCCGCGGCAGCGGCG
CATTTCATCAGACTCGAGCAACTCGTCGTCGATTGATGCGGACATTTTCC
AAAAGCTCTTCCATGGCAAGTACCTCGACGACGAACTGCTTAAGGAGGGC
TCTGGCTCGAAGTCGCAGGACAGGCGTCGACGCCCCCCATCTCCCTCCTC
CAGCGACGAGTCCAACGATGCCTTGGAAGCCCTCTTCTGCGGGAAGAGCA
GCCAGTCAAAGCTGAGCAAGAGGCGCGAACGGTATGAGTCGTTCGATTCG
GTGGACGACCTAGGAGAAGCCCTAATGCGTCCATCGCACAGGCTGACCGT
ACCCAAGCCCAGTACCTCTCAGGCAGGTTCCAAAAAGTCACAAGATGCTG
CCCCACACAGAAGCATTAGCAATAGCAGCAGCAGCAACATTGCCATGTCA
TCTGGGCAAACTTATGCATGTCCAAAAAACAAGAAAACCAATTCTGTGGC
CAACAAGACAGCAGTATCTGCAAATGGTGATAAATGGGCTTCCGGCAAAA
ACAAGACCGTTACCATTGTAAAGCCCCAAAAAACAGATCTAAGGCCTTCG
CGGCTTGAACCCAAAACAGATCCATTAAATTTGGGTGACTTATACGGGGA
CTCTGACAGCGATTCGTCCTATGAGTATGAATCGGACTTTTACGGCGATC
AAGACTCCGATGAAGAGGATGAGCCGGTGATCGACATTTCAACGGACACA
AGCAGGACCACATCGGTGGCGGAAGCTGCCAAACGAAAGCAACGCCAAGA
TGTGGAGAAGTCACTAACTGGCAAAAAGGAACAAGTTAAACCAGCTCGAC
GCCGACAACTCGCTGAGGTAGAAGAACGACCATCCCTTAAACGCTCAAAG
ACGGAGTCAGAAGCCAAGTCCACTGTCCAGGGCAAATATATCTCTATTAT
TGGCAATGAGACTATCATGTCATCCACAACAGCGCCCATTAGGGAAACCA
ACAGAGAGGCGGCCAGCACATCTCCATCTGCAAGAAAGTCGGCGGTACAA
GAAGCCAAGCACGTCGAAACCACTAAGCATATCATCCTAGGACCACCAGG
CAAAAAGCTGCTTCATTCAGATAGTCCAGCCGCGGAAGTCAAGAAGCCCA
TGGTGCAAACTCTGCTGAGTTCCACTCTAAGTCTTCAAAAACCTTCGACA
CTAGACGATGGTAGTCCACTGAAAATAAGGAAATCCTTGAAGAAGTCGAT
TGCCGATGAAAACATTGACGGCGATCAGTCGATCTTTAGCAGTTCCTCTG
TGCTTAATAAAAATACGTCTGTTGTTGCTCCGAGAAAGGTTAATATATCC
GTGTCCCTATTGCAATCGAAGGACACTCAAGTGGAAACGGCTGCATCGTC
ATCCGAAACACCAATATTGACAAAAAAGGAAAAACTTAAAACACAGAAAT
CGACCAAGAAACCGGAGGGCAATAAGAAAACGGAGAGCAAGAAAAAATCT
TTAGTACAAGGCCCTCAAATGAAAACCCAAAAATCCGAGGAGGCTGTATC
GGGCCCAAAAATTTTGAATAAATACCTAAAATCGGAAACCGAATCCTCAA
GGAAAACAGTTTCCACAGTAACAGGCCGGAAACAAATTGGGCAACTGGAG
GTTTTGAAGAAACCGGAAAGCAGAAAGTCGGAGGAGTCTTTAGTAGAAGC
AATTTCTCGGAAAAAGCAATCCCAAGTCCAACGGTTAAGTAAAATAGATG
GTAGAAAATCTGAAGGAACATCTTTACCTCAACCAGATGTCTCGAAGTCT
GAAACTGCTTTGAAAGCAGCTTTGCCCAAGGAAACAGAGTTTCCAGTTCA
AGACGCAGAAATCGAGAAAATGTCTAAAGGTCGCGGACACCAAAATGCGG
TCAAAAACACCAAAACAGAACAGCCCAAATCGAAGCCCAAGACTGAGGTT
CGTTCCCTGCAAGCTGAGGCTGCTACTGAGCTAATGGATTCGATGGACTC
TCAATCAGATGTATCCGATATCCGCGCAACATTTCCCGAATCCCAAGGAA
TCTTCAATGTGCCAGGTCACATGACCCGAGCTATCAGCAGCAACAGATCA
CTGGCACCTACACCAACTCCCATGTCTGACAGTCAACGAAATGCTTCTAA
GGAGCGCTTTACGCCTGTTTCGGACCAAAAAAAACCAATCAGGGAATCAC
AGACTTTATCAAAGCGTCGTGCACGAGGTGGAAGGAACCAGCCACTTGTT
TCAAAAAGGAAAGCGGGTGAAGCGGAAGACGGTACAGCGGTGATCAATCC
CAAGAGACCCAGAGAGATGGATGAAGAGGACCACCCACAACAGAATGATC
ATGTCCAAGAATCTGCATTTGCTGCGTTCCCAGTAAAAATAACAGCTGCT
TCTTCTGTTATTCCCCAAGTAGTGCGTTCTACGGGTAATACAGTTCCTCA
AAATATTAGTCCCCGCAAACTTTGCGTGAAAATAAATCGGAGGCCCTATA
ATAAGTGGCTTCGGAGCACGCAGGAGAGGAATGAAGAACAAGAAGGATCT
CGTAATGTAACGTCATTACCACTGCTTGGTGAAACCTCGGAAACGGATTC
AGCGGCGGAGTCGATGTCAGAATCAATTCTGCAATCCCAAGTACAGTCGG
AGCCTGCTATTCAGCCACTGCCTGCATCCCAGCCCGATTCTTGTACATTA
CAGGCCTCAGATCTCCGAATAAGGGAAAGCTCAGCTCAACTTGCTCCAAT
TGCAGCTTATGATTCACCGGCAGCTAACGATTCATCGACATCACCCGCTT
TAGACATCGCACCCGAAAGTGCACAGACAGCTAAAGCAACCTTGAACACT
GCTCTCTGTCCATCGACTGAAAAACATCTTCCTGACGAACCAACGTTGCT
GGAAAGTTCCAAGAAGGTTGCAGAACCGCAGAAGCTACAAACGTTTCAAG
CCAAATGTTTGCCTGTGCCAATTCCAGAGGTAAAGTCAGAGCCGGAAGAT
ATCATGGATGAGCATTCACCTAATGAGCCCATGCCTATGGTTGCTGCAGC
ACCAGCAACACCTCAACCACATGCGATTACGGAAGACGCTGGGCCCGACA
CTATTCAAGTCAACACCTTGGGTGTTTCCACTTCATCTAGGCCGCTTGAG
TTACATTCAATTCCCTCCGCCAGTGACCCTGACGGAAACCCCAATGCCAT
TGGGCAGACCAAGATGTACTCATTTCTCTACCCGAAACGTTACAAGCAAT
CCTATGACGACGTCGGTCTAGACTTCTGCTGTCCAAATCTCGATGGACCA
ATGCGGGCTATTGATTTTACTCGATTGCATTCGAAGGCCGAGGTACCGGT
GCTGGAAATCCCGCAGTTCCTGGTTATAACCACCAAGTTTATCTCTAAGG
CGGATAAGAATATGCCAAGTAAGGTGCGGGCAAAGCTGGAATTACTGGAC
AAGTCGAAAGAACGGGATTCCAGTAAACTGACCCCGACGGCTACCACTCC
GACTGCTGATCCCACCGGTCCTTCATCCTTTTCACCTGCTCCCGCTTCGG
TTGGTCCGGCAACTCAACCGTTTCCATCGATTATACAGAATTTGCTATCG
GCTCCCCTACCTGATCCAGGTCTATTTAATCATCCCACAACCGTGGACCC
ATCTACTTCCACTCCCGTAGTTTCAGGCAGTTCCTCTTCCACTACCATTT
CGGCGGACTTGGATTCTTTAAGCAAACAGTTGCCACGTGGCACAAAACTG
ATCAAGAAGTCAGTGCAACAAGTGGCTACCAATCCCTCATTAGCCGGCAC
CTCGATGGTAATTAATGCGTCGCCGTCCTTTATTCAGTTACCTCCGATTT
GCCCCAACGACAAGCAGCGCGTGGAGTTGCAGGCGAGGGTTCAAATGTTT
GACTTGGTGCTCCAGACCCTCAGCCGGCGGGCAGCCAACTTATCAGTGGC
CGAGCGACAGCGTACCATTGAGGAAATTGTAAGGACCAGCTCGTTAATGG
CCATCGACGTGGATGTGGGTACAAAGCTTTTGGAAAACTATGTACATTAC
TTAAACAAGGCTACCAGCACAATGACTCCTCTAACCCCGGCCCAAATCAA
CTCGAGCTTAGGCGCTTCCACCAGCTCGACGCTTTCCAAAAGCATAGCCA
CCTCCGACATCCCACAGCAAGGGAAGAAAATATCTGCGGACCATGCCCAA
CAGCGGAGTTCTCTCCCCGCTACCATTCCCCTTTACGATGGGGGCAGGAA
CACACTTGGCTTTCCGTATAGCTGCTCGAAATCGACGGCAGGGCGAAAGT
CTTCATATGTTGCCACCAGCACGCCTGTGAAAGCCTCCACATCCCAAGCA
GCAGCAGCAGCAGCTCTAGGAAACGCTCAGCCAAGATCCACGTTGGGGAT
CCCGAAAAGTGTTCGGGAAGACGCTAGTCAGTTCGTTAATCTCAACACAA
CAGTGTGTATGCCAGCACCAAGGACGAATGCCAAGAAAAAACCAGGGACT
TCGGGCCCTTTAAAGTCGATGAATTCTTCACCAGCTGTGCAGAAACCGGC
GCTGTGCAAACAGCAGACGGCGCCGGCAAGAACTCTGTCCAAGAGCACAG
TCTCATCCGTTGCACGAGCGAAATCAACAGGGTCTTTAAGTGCAGTGTTG
GGTGAGACTCCTGCTGACGAATTCGTATCCCCCGCCGGAATGAGTCTGAG
TACCACCGGAAATCCGAATGTCTTCATCATTAACCACGCGGTGCAGTCAG
AGGAAAGCATCCTGCCTGACTCCAACAGCAGCGTAGGGCACATGGAAACG
ACGGTGATCAAAGGCGAGCTGGATGATTCTGCGGAGATTATTATATAGCA
GGGCAAAGACTATAAACCAGTTGGAAAGTATTCTAAGTTACTTTAGCACA
GTTAATTAAGAGTTAATTATTTCGTTGAACGCAAAATCATAATTTTGTAA
TTCTGAAATGAAGAATTTGTTAAACCTTACGCAGCATCGTCATTTTTTTT
TTTTTTTTTTGAAATAAATGGTTAAATATTTTATTCAGTGTGGGACTTTC
AAGTAAATATCTTATAGTTATCATTGCATATTTATTAAGTATCCAAATAA
AATATAAATATAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AA

RE12383.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:21:46
Subject Length Description Subject Range Query Range Score Percent Strand
Su(var)2-HP2-RB 5591 Su(var)2-HP2-RB 180..5591 1..5412 27045 99.9 Plus
Su(var)2-HP2-RA 10463 Su(var)2-HP2-RA 6123..10463 1072..5412 21690 99.9 Plus
Su(var)2-HP2.b 10375 Su(var)2-HP2.b 6039..10375 1075..5411 21670 99.9 Plus
Su(var)2-HP2-RA 10463 Su(var)2-HP2-RA 180..1252 1..1073 5365 100 Plus
Su(var)2-HP2.b 10375 Su(var)2-HP2.b 96..1168 1..1073 5365 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10495194..10498790 4738..1142 17940 99.9 Minus
chr2R 21145070 chr2R 10494454..10495139 5414..4729 3430 100 Minus
chr2R 21145070 chr2R 10504730..10505051 614..293 1610 100 Minus
chr2R 21145070 chr2R 10504349..10504666 928..611 1590 100 Minus
chr2R 21145070 chr2R 10505120..10505415 296..1 1480 100 Minus
chr2R 21145070 chr2R 10504146..10504289 1072..929 720 100 Minus
chr2R 21145070 chr2R 10498923..10498995 1144..1072 365 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:34:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14607891..14611487 4738..1142 17940 99.9 Minus
2R 25286936 2R 14607151..14607836 5414..4729 3430 100 Minus
2R 25286936 2R 14617427..14617748 614..293 1610 100 Minus
2R 25286936 2R 14617046..14617363 928..611 1590 100 Minus
2R 25286936 2R 14617817..14618112 296..1 1480 100 Minus
2R 25286936 2R 14616843..14616986 1072..929 720 100 Minus
2R 25286936 2R 14611620..14611692 1144..1072 365 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 14609090..14612686 4738..1142 17940 99.9 Minus
2R 25260384 2R 14608350..14609035 5414..4729 3430 100 Minus
2R 25260384 2R 14618626..14618947 614..293 1610 100 Minus
2R 25260384 2R 14618245..14618562 928..611 1590 100 Minus
2R 25260384 2R 14619016..14619311 296..1 1480 100 Minus
2R 25260384 2R 14618042..14618185 1072..929 720 100 Minus
2R 25260384 2R 14612819..14612891 1144..1072 365 100 Minus
Blast to na_te.dros performed 2019-03-15 11:29:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6691..6768 661..739 131 64.6 Plus
roo 9092 roo DM_ROO 9092bp 1041..1098 684..739 122 72.4 Plus
roo 9092 roo DM_ROO 9092bp 1070..1125 682..739 122 72.4 Plus

RE12383.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:30:07 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10494474..10495136 4732..5394 93 <- Minus
chr2R 10495201..10498787 1145..4731 99 <- Minus
chr2R 10498923..10498994 1073..1144 100 <- Minus
chr2R 10504146..10504289 929..1072 100 <- Minus
chr2R 10504349..10504663 614..928 100 <- Minus
chr2R 10504731..10505048 296..613 100 <- Minus
chr2R 10505121..10505415 1..295 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:43:45 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..4902 247..5148 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:45:22 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..4902 247..5148 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:29:55 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..4902 247..5148 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:36:05 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..4902 247..5148 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:43:43 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..5081 68..5148 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:45:22 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..5327 68..5394 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:29:55 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 7..5400 1..5394 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-10 09:58:07 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 1..5081 68..5148 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:36:05 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)2-HP2-RB 7..5400 1..5394 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:07 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14607171..14607833 4732..5394 100 <- Minus
2R 14607898..14611484 1145..4731 99 <- Minus
2R 14611620..14611691 1073..1144 100 <- Minus
2R 14616843..14616986 929..1072 100 <- Minus
2R 14617046..14617360 614..928 100 <- Minus
2R 14617428..14617745 296..613 100 <- Minus
2R 14617818..14618112 1..295 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:07 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14607171..14607833 4732..5394 100 <- Minus
2R 14607898..14611484 1145..4731 99 <- Minus
2R 14611620..14611691 1073..1144 100 <- Minus
2R 14616843..14616986 929..1072 100 <- Minus
2R 14617046..14617360 614..928 100 <- Minus
2R 14617428..14617745 296..613 100 <- Minus
2R 14617818..14618112 1..295 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:07 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14607171..14607833 4732..5394 100 <- Minus
2R 14607898..14611484 1145..4731 99 <- Minus
2R 14611620..14611691 1073..1144 100 <- Minus
2R 14616843..14616986 929..1072 100 <- Minus
2R 14617046..14617360 614..928 100 <- Minus
2R 14617428..14617745 296..613 100 <- Minus
2R 14617818..14618112 1..295 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:29:55 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10494676..10495338 4732..5394 100 <- Minus
arm_2R 10495403..10498989 1145..4731 99 <- Minus
arm_2R 10499125..10499196 1073..1144 100 <- Minus
arm_2R 10504348..10504491 929..1072 100 <- Minus
arm_2R 10504551..10504865 614..928 100 <- Minus
arm_2R 10504933..10505250 296..613 100 <- Minus
arm_2R 10505323..10505617 1..295 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:31:06 Download gff for RE12383.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14619017..14619311 1..295 100   Minus
2R 14608370..14609032 4732..5394 100 <- Minus
2R 14609097..14612683 1145..4731 99 <- Minus
2R 14612819..14612890 1073..1144 100 <- Minus
2R 14618042..14618185 929..1072 100 <- Minus
2R 14618245..14618559 614..928 100 <- Minus
2R 14618627..14618944 296..613 100 <- Minus

RE12383.pep Sequence

Translation from 246 to 5147

> RE12383.pep
MEDIEYLDEYKDLVLPGIKSSAPTASSAGVPRQRRISSDSSNSSSIDADI
FQKLFHGKYLDDELLKEGSGSKSQDRRRRPPSPSSSDESNDALEALFCGK
SSQSKLSKRRERYESFDSVDDLGEALMRPSHRLTVPKPSTSQAGSKKSQD
AAPHRSISNSSSSNIAMSSGQTYACPKNKKTNSVANKTAVSANGDKWASG
KNKTVTIVKPQKTDLRPSRLEPKTDPLNLGDLYGDSDSDSSYEYESDFYG
DQDSDEEDEPVIDISTDTSRTTSVAEAAKRKQRQDVEKSLTGKKEQVKPA
RRRQLAEVEERPSLKRSKTESEAKSTVQGKYISIIGNETIMSSTTAPIRE
TNREAASTSPSARKSAVQEAKHVETTKHIILGPPGKKLLHSDSPAAEVKK
PMVQTLLSSTLSLQKPSTLDDGSPLKIRKSLKKSIADENIDGDQSIFSSS
SVLNKNTSVVAPRKVNISVSLLQSKDTQVETAASSSETPILTKKEKLKTQ
KSTKKPEGNKKTESKKKSLVQGPQMKTQKSEEAVSGPKILNKYLKSETES
SRKTVSTVTGRKQIGQLEVLKKPESRKSEESLVEAISRKKQSQVQRLSKI
DGRKSEGTSLPQPDVSKSETALKAALPKETEFPVQDAEIEKMSKGRGHQN
AVKNTKTEQPKSKPKTEVRSLQAEAATELMDSMDSQSDVSDIRATFPESQ
GIFNVPGHMTRAISSNRSLAPTPTPMSDSQRNASKERFTPVSDQKKPIRE
SQTLSKRRARGGRNQPLVSKRKAGEAEDGTAVINPKRPREMDEEDHPQQN
DHVQESAFAAFPVKITAASSVIPQVVRSTGNTVPQNISPRKLCVKINRRP
YNKWLRSTQERNEEQEGSRNVTSLPLLGETSETDSAAESMSESILQSQVQ
SEPAIQPLPASQPDSCTLQASDLRIRESSAQLAPIAAYDSPAANDSSTSP
ALDIAPESAQTAKATLNTALCPSTEKHLPDEPTLLESSKKVAEPQKLQTF
QAKCLPVPIPEVKSEPEDIMDEHSPNEPMPMVAAAPATPQPHAITEDAGP
DTIQVNTLGVSTSSRPLELHSIPSASDPDGNPNAIGQTKMYSFLYPKRYK
QSYDDVGLDFCCPNLDGPMRAIDFTRLHSKAEVPVLEIPQFLVITTKFIS
KADKNMPSKVRAKLELLDKSKERDSSKLTPTATTPTADPTGPSSFSPAPA
SVGPATQPFPSIIQNLLSAPLPDPGLFNHPTTVDPSTSTPVVSGSSSSTT
ISADLDSLSKQLPRGTKLIKKSVQQVATNPSLAGTSMVINASPSFIQLPP
ICPNDKQRVELQARVQMFDLVLQTLSRRAANLSVAERQRTIEEIVRTSSL
MAIDVDVGTKLLENYVHYLNKATSTMTPLTPAQINSSLGASTSSTLSKSI
ATSDIPQQGKKISADHAQQRSSLPATIPLYDGGRNTLGFPYSCSKSTAGR
KSSYVATSTPVKASTSQAAAAAALGNAQPRSTLGIPKSVREDASQFVNLN
TTVCMPAPRTNAKKKPGTSGPLKSMNSSPAVQKPALCKQQTAPARTLSKS
TVSSVARAKSTGSLSAVLGETPADEFVSPAGMSLSTTGNPNVFIINHAVQ
SEESILPDSNSSVGHMETTVIKGELDDSAEIII*

RE12383.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13525-PA 3229 GF13525-PA 1894..3229 276..1633 1343 36 Plus
Dana\GF13525-PA 3229 GF13525-PA 1..287 1..276 599 61 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22412-PA 3378 GG22412-PA 2034..3378 276..1633 4416 70.1 Plus
Dere\GG22412-PA 3378 GG22412-PA 1..285 1..276 1025 83.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20079-PA 1115 GH20079-PA 1..278 1..269 403 47.6 Plus
Dgri\GH20080-PA 1249 GH20080-PA 921..1248 1290..1632 379 34.9 Plus
Dgri\GH20080-PA 1249 GH20080-PA 622..835 978..1167 298 35.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:59
Subject Length Description Subject Range Query Range Score Percent Strand
Su(var)2-HP2-PB 1633 CG12864-PB 1..1633 1..1633 8180 100 Plus
Su(var)2-HP2-PA 3257 CG12864-PA 1714..3257 100..1633 6792 89.3 Plus
Su(var)2-HP2-PA 3257 CG12864-PA 1..1061 1..1022 1457 37.8 Plus
Muc68D-PB 1514 CG6004-PB 226..1266 14..1039 272 19.8 Plus
futsch-PF 5495 CG34387-PF 2921..3932 39..1022 258 21.6 Plus
futsch-PE 5495 CG34387-PE 2921..3932 39..1022 258 21.6 Plus
futsch-PC 5495 CG34387-PC 2921..3932 39..1022 258 21.6 Plus
Muc14A-PA 16223 CG32580-PA 3763..5430 19..1607 250 19.7 Plus
Muc68D-PB 1514 CG6004-PB 197..1167 139..1240 249 19.9 Plus
Muc14A-PA 16223 CG32580-PA 3396..4945 36..1607 249 19.8 Plus
Muc14A-PA 16223 CG32580-PA 3676..5236 8..1607 246 19.7 Plus
futsch-PF 5495 CG34387-PF 3230..4785 72..1631 244 19.1 Plus
futsch-PE 5495 CG34387-PE 3230..4785 72..1631 244 19.1 Plus
futsch-PC 5495 CG34387-PC 3230..4785 72..1631 244 19.1 Plus
Muc14A-PA 16223 CG32580-PA 6119..7617 139..1611 232 19.5 Plus
Muc14A-PA 16223 CG32580-PA 6906..8341 136..1607 226 19.9 Plus
Muc14A-PA 16223 CG32580-PA 3090..4682 19..1605 224 19.4 Plus
Muc14A-PA 16223 CG32580-PA 2435..3975 36..1607 218 18.7 Plus
Muc14A-PA 16223 CG32580-PA 12517..14146 43..1630 213 19.1 Plus
Strn-Mlck-PT 7905 CG44162-PT 3788..4766 60..1040 204 17.5 Plus
Strn-Mlck-PV 7944 CG44162-PV 3827..4805 60..1040 204 17.5 Plus
Strn-Mlck-PS 8216 CG44162-PS 3788..4766 60..1040 204 17.5 Plus
Strn-Mlck-PU 8255 CG44162-PU 3827..4805 60..1040 204 17.5 Plus
Muc68D-PB 1514 CG6004-PB 146..1207 467..1589 201 19.7 Plus
Muc14A-PA 16223 CG32580-PA 5537..7097 139..1607 197 19 Plus
Muc14A-PA 16223 CG32580-PA 11632..12518 134..999 194 19.4 Plus
Muc14A-PA 16223 CG32580-PA 5029..6634 18..1607 192 19.1 Plus
futsch-PF 5495 CG34387-PF 1544..2932 71..1522 191 18.6 Plus
futsch-PE 5495 CG34387-PE 1544..2932 71..1522 191 18.6 Plus
futsch-PC 5495 CG34387-PC 1544..2932 71..1522 191 18.6 Plus
Muc30E-PC 1702 CG33300-PC 95..968 128..1068 187 19.6 Plus
Muc14A-PA 16223 CG32580-PA 13577..14969 225..1567 186 18.6 Plus
Muc14A-PA 16223 CG32580-PA 2026..3644 19..1630 183 18.6 Plus
Strn-Mlck-PT 7905 CG44162-PT 3443..4246 252..1040 177 17.8 Plus
Strn-Mlck-PV 7944 CG44162-PV 3482..4285 252..1040 177 17.8 Plus
Strn-Mlck-PS 8216 CG44162-PS 3443..4246 252..1040 177 17.8 Plus
Strn-Mlck-PU 8255 CG44162-PU 3482..4285 252..1040 177 17.8 Plus
Muc14A-PA 16223 CG32580-PA 1232..2756 36..1589 169 19.3 Plus
Muc14A-PA 16223 CG32580-PA 8345..9236 133..1024 168 19 Plus
futsch-PF 5495 CG34387-PF 1924..2900 61..1048 167 20.2 Plus
futsch-PE 5495 CG34387-PE 1924..2900 61..1048 167 20.2 Plus
futsch-PC 5495 CG34387-PC 1924..2900 61..1048 167 20.2 Plus
futsch-PF 5495 CG34387-PF 2000..3086 8..1034 166 19.5 Plus
futsch-PE 5495 CG34387-PE 2000..3086 8..1034 166 19.5 Plus
futsch-PC 5495 CG34387-PC 2000..3086 8..1034 166 19.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18795-PA 1422 GI18795-PA 1..280 1..276 408 46.2 Plus
Dmoj\GI18796-PA 620 GI18796-PA 115..213 1083..1181 394 66.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:55:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10637-PA 3191 GL10637-PA 1..277 1..276 599 57.7 Plus
Dper\GL10637-PA 3191 GL10637-PA 2805..3190 1255..1632 595 43.4 Plus
Dper\GL10637-PA 3191 GL10637-PA 2589..2787 995..1170 404 47.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:55:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\HP2-PA 3366 GA11866-PA 2699..3365 995..1632 943 40.3 Plus
Dpse\HP2-PA 3366 GA11866-PA 1..277 1..276 602 58 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:55:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20199-PA 3097 GM20199-PA 2089..3097 617..1633 4505 87.6 Plus
Dsec\GM20199-PA 3097 GM20199-PA 1..275 1..276 1183 94.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:55:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25670-PA 2639 GD25670-PA 1290..2639 276..1633 6092 88.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:55:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\HP2-PA 2677 GJ21824-PA 2140..2676 1071..1632 731 37.4 Plus
Dvir\HP2-PA 2677 GJ21824-PA 1..294 1..276 391 48.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15733-PA 1563 GK15733-PA 1..272 1..276 574 54.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12300-PA 3246 GE12300-PA 1898..3246 276..1633 4501 68.6 Plus
Dyak\GE12300-PA 3246 GE12300-PA 1..280 1..276 1084 84.6 Plus

RE12383.hyp Sequence

Translation from 246 to 5147

> RE12383.hyp
MEDIEYLDEYKDLVLPGIKSSAPTASSAGVPRQRRISSDSSNSSSIDADI
FQKLFHGKYLDDELLKEGSGSKSQDRRRRPPSPSSSDESNDALEALFCGK
SSQSKLSKRRERYESFDSVDDLGEALMRPSHRLTVPKPSTSQAGSKKSQD
AAPHRSISNSSSSNIAMSSGQTYACPKNKKTNSVANKTAVSANGDKWASG
KNKTVTIVKPQKTDLRPSRLEPKTDPLNLGDLYGDSDSDSSYEYESDFYG
DQDSDEEDEPVIDISTDTSRTTSVAEAAKRKQRQDVEKSLTGKKEQVKPA
RRRQLAEVEERPSLKRSKTESEAKSTVQGKYISIIGNETIMSSTTAPIRE
TNREAASTSPSARKSAVQEAKHVETTKHIILGPPGKKLLHSDSPAAEVKK
PMVQTLLSSTLSLQKPSTLDDGSPLKIRKSLKKSIADENIDGDQSIFSSS
SVLNKNTSVVAPRKVNISVSLLQSKDTQVETAASSSETPILTKKEKLKTQ
KSTKKPEGNKKTESKKKSLVQGPQMKTQKSEEAVSGPKILNKYLKSETES
SRKTVSTVTGRKQIGQLEVLKKPESRKSEESLVEAISRKKQSQVQRLSKI
DGRKSEGTSLPQPDVSKSETALKAALPKETEFPVQDAEIEKMSKGRGHQN
AVKNTKTEQPKSKPKTEVRSLQAEAATELMDSMDSQSDVSDIRATFPESQ
GIFNVPGHMTRAISSNRSLAPTPTPMSDSQRNASKERFTPVSDQKKPIRE
SQTLSKRRARGGRNQPLVSKRKAGEAEDGTAVINPKRPREMDEEDHPQQN
DHVQESAFAAFPVKITAASSVIPQVVRSTGNTVPQNISPRKLCVKINRRP
YNKWLRSTQERNEEQEGSRNVTSLPLLGETSETDSAAESMSESILQSQVQ
SEPAIQPLPASQPDSCTLQASDLRIRESSAQLAPIAAYDSPAANDSSTSP
ALDIAPESAQTAKATLNTALCPSTEKHLPDEPTLLESSKKVAEPQKLQTF
QAKCLPVPIPEVKSEPEDIMDEHSPNEPMPMVAAAPATPQPHAITEDAGP
DTIQVNTLGVSTSSRPLELHSIPSASDPDGNPNAIGQTKMYSFLYPKRYK
QSYDDVGLDFCCPNLDGPMRAIDFTRLHSKAEVPVLEIPQFLVITTKFIS
KADKNMPSKVRAKLELLDKSKERDSSKLTPTATTPTADPTGPSSFSPAPA
SVGPATQPFPSIIQNLLSAPLPDPGLFNHPTTVDPSTSTPVVSGSSSSTT
ISADLDSLSKQLPRGTKLIKKSVQQVATNPSLAGTSMVINASPSFIQLPP
ICPNDKQRVELQARVQMFDLVLQTLSRRAANLSVAERQRTIEEIVRTSSL
MAIDVDVGTKLLENYVHYLNKATSTMTPLTPAQINSSLGASTSSTLSKSI
ATSDIPQQGKKISADHAQQRSSLPATIPLYDGGRNTLGFPYSCSKSTAGR
KSSYVATSTPVKASTSQAAAAAALGNAQPRSTLGIPKSVREDASQFVNLN
TTVCMPAPRTNAKKKPGTSGPLKSMNSSPAVQKPALCKQQTAPARTLSKS
TVSSVARAKSTGSLSAVLGETPADEFVSPAGMSLSTTGNPNVFIINHAVQ
SEESILPDSNSSVGHMETTVIKGELDDSAEIII*

RE12383.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:01:26
Subject Length Description Subject Range Query Range Score Percent Strand
Su(var)2-HP2-PB 1633 CG12864-PB 1..1633 1..1633 8180 100 Plus
Su(var)2-HP2-PA 3257 CG12864-PA 1714..3257 100..1633 6792 89.3 Plus
Su(var)2-HP2-PA 3257 CG12864-PA 1..1061 1..1022 1457 37.8 Plus
Muc68D-PB 1514 CG6004-PB 226..1266 14..1039 272 19.8 Plus
futsch-PF 5495 CG34387-PF 2921..3932 39..1022 258 21.6 Plus
futsch-PE 5495 CG34387-PE 2921..3932 39..1022 258 21.6 Plus
Muc68D-PB 1514 CG6004-PB 197..1167 139..1240 249 19.9 Plus
futsch-PF 5495 CG34387-PF 3230..4785 72..1631 244 19.1 Plus
Muc68D-PB 1514 CG6004-PB 146..1207 467..1589 201 19.7 Plus
futsch-PF 5495 CG34387-PF 1544..2932 71..1522 191 18.6 Plus
futsch-PF 5495 CG34387-PF 1924..2900 61..1048 167 20.2 Plus
futsch-PF 5495 CG34387-PF 2000..3086 8..1034 166 19.5 Plus