BDGP Sequence Production Resources |
Search the DGRC for RE12569
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 125 |
Well: | 69 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10924-RA |
Protein status: | RE12569.pep: gold |
Preliminary Size: | 2225 |
Sequenced Size: | 3457 |
Gene | Date | Evidence |
---|---|---|
CG10924 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10924 | 2002-03-28 | Blastp of sequenced clone |
CG10924 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10924 | 2008-04-29 | Release 5.5 accounting |
CG10924 | 2008-08-15 | Release 5.9 accounting |
CG10924 | 2008-12-18 | 5.12 accounting |
3457 bp (3457 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094852
> RE12569.complete AGTTTGGCTCGTTGTGCCAGAGCAGCAACAAGTGCTCCGCTATATCTCAA TCTGAATTTGAATCCAAATCCGAAACATAATCTGTTGCCGCGGCTGTAGC TGAATACGAAGCGCAACAAGTGCGCCAGTGACATCCAGAAGCCAGTGCAT TGCAGACGAGGCTGAGATAAATTTAAATTAGGTCCGCAATTTCATCAAAT TAACAGCGGAACCCTGTGGCCCAACAAAGCGCAATAAATTAATTAAGACG GAGATAAAATTGCAACTGCATTAGCTGCCAAGAGTATTAGCGGGCGAAAT TAGAAAGTGAAAGCCAACACGAACAGGTGACAGAATGCTGCTCAAAGGCG CACAGCTGCTGCGATGCGGATTGGTCTCACCACACCGGAACTCGAACTTC CGCCTGACCTGTCGCTTCCTCTCCATTCAGTATGGAGATGCAAAGATCCT CACCCCTGCCGTCAAACAGTACGTGGAAAAGTGCGTGGAGCTCTGCCAAC CGGAAAGGGTGCACATCTGTGATGGTACTGAGGTCGAGAGCAAGTTGCTC CAGGGCATCATGCTGAAGAAGGGAACCATCATTCCTCTGCCGAAGTACGA GAATTGCTGGCTGGCAAGAACCAATCCGGCGGATGTGGCTAGAGTGGAGG GAAAAACGTTCATCTCAACGGATTCGAAGGAGCAGACAGTACCGGTTACG GAGAAGGCCACACCGGGAATGCTGGGTAACTGGATAGCCGAAAAGGACAT GCAGGCGGCGATCAAGGAAAGATTCCCCGGCTGCATGAAAGGTCGCACCA TGTATGTTATTCCTTTTAGCATGGGTCCAGTGGGCTCACCTCTCTCCAAA ATCGGAATCGAGATCACAGACTCACCATACGTCGTCGAGTCCATGAAGAT CATGACTAGGGCGGGCAATCCAGTGCTTAATTATCTGCAATCTGGGGATG GTCAGTTTGTCAAGTGCCTGCATTCCGTGGGTACGCCCAAAAGTGGTGTC CAGGCAATGCCATCCTGGCCCTGCGATCCCGAACGCACTATTGTGCTGCA CAAGCCAGCAGAAAATGAGATTGTATCTTATGGATCTGGGTATGGTGGTA ACTCCCTGCTGGGCAAGAAGTGCCTCGCTCTGAGGATTGGCAGCACCATT GCCAAACGAGAGGGCTGGCTGGCCGAGCACATGTTGATACTGGGCATCAC CAATCCGCAAGGTAAGAAGATCTACATAGCTGCCGCCTTTCCATCAGCTT GCGGTAAGACCAACCTGGCGATGATGACTCCTACCCTGCCTGGCTACAAA GTGGAGTGCGTGGGCGATGACATCGCCTGGATGAAGTTCGATAACAAGGG TGTGCTGCGAGCGATTAATCCGGAGAATGGATTCTTTGGCGTGGCGCCCG GAACGTCGAGGGCCACCAATCCCATAGCCATGGATACGATCTTCCGAAAC TCTGTCTTTACGAACGTGGCCTCTACATCCGATGGAGGTGTCTACTGGGA GGGAATGGAAAAGGATCAGCTGAAGGGGGTGACTGTCACGGACTGGTTGG GTAAACTCTGGTCCCAGGAATCCGGAAAGCCAGCTGCCCATCCCAACTCC AGGTTCTGTACACCCGCCTCTCAGTGTCCCATTATTGATCCCGCCTGGGA GGATAGCGAAGGAGTGCCCATCTCCGCAATTCTTTTCGGAGGTCGTCGTC CCAGTGGAGTTCCCTTGGTTTACGAGGCTCGAGACTGGAAGCACGGCGTA TTTATTGGAGCTGCTATGAGGAGCGAGGCCACGGCAGCCGCTGAGTTCAA GGGCAAGGTCATCATGCACGATCCCTTCGCCATGAGACCCTTTTTCGGCT ACAACTTCGGCGACTATCTGGGTCACTGGCTAAGCATGGAGCAGCGTGGC CAGGTGCCCAAGATCTTTCACGTAAATTGGTTCCGAAAGAGCAGTGAGGG CAAGTTCCTTTGGCCCGGATTCGGGGAGAACTCACGAGTCCTGGACTGGA TCTTCCGGCGGGTGGAGGGCGAGCAGTGCTTCGAGGACTCTCCCATTGGC CGCCTGCCCAGCAAGAATTCATTGAACTTGGATAGTTTGGAAAACATTGA TCTCGACCAGCTTTTCGATCTGCCAAAAGATTTCTGGGAGCAGGAGGTGG CTGCCATAGAGAGGTACTTCGAGGAGCAGGTGGGCCACCATCTGCCAGGT GCCGTGGCCGAGGAGCTGAGGGAGCTGAAGGCGCGTGTTGCTGACATGTG ATGTGTGTGTTCCATAGGTTACTTCCTAATCTAAGACCCCTTATTGCCTA AAATAAAACGAAACGAACGAGATTTTTATAGTGAAATTTGACTTGTGCCC ATTCGAGAATGGAATTGGGATCGAAATTGGGTTTGGGGCGTGGCCTAGAC GGGGCTTATCAGTGGTCGCCTCGGCGGAGGCCCGTCCGCAATTGGCGTAA ACAAGCGTATAAATCCATAATGCCGTTTAACCTAACTTATCAACAGATCC ACGCGATGAAAAACAAGCAAATAAATGCCAGAAAAAGCCAAAAAGAAAGT AAAGTTTATGGGTGAACCTTTGCAATTTTCGGTGGGTTTCCAAGGACTGA TTACTAAATTCAAAGCGTGTGGTGTGATGTACACTATGGGGTGAACAGCG ATAAAAAGCCAATAAGCCAAGAAACCAAAAGGCAAAATAGCTAAGAAATC GAATCCCTTAAAATAGTTCATGGGCAATGTAAAGATCCTCATAGTGATGT TTTCCCTCGGAAAGTTTTCCTGGTCGACAGCACAAATCCGGGTCTGATCT ATATTTAGACGAACTCAGAGGCTCGTCCACTGATAACCCGCCCGGCTCCC TCCTCCCCATTGCCTTCTTCTCAACCAATCGCATTATTGATTATGCATAT ATTTAGCGAGTCGATCGTCTATTGACGTAAATTCCAAATAAGCCCGAATC ATCGAAATGCGCCAAGTGGCGGTTAGGTGAGAACAGGAGCGAGGCAGTTA GAGTCTGAGTCCAAGTCCAAGTCTGGGTCCAGCAATTAATGCCGATGATG AAGATTATCAGGCCCAACTAGAAAAACAAGTCCATAGTTATAAATAAACC AATCGAAAATCACGGCAACGCGTGTAGACGAATTCGATTTAATTCGCAAC TGGACTTTTCGTAAAGGGAGTCAAAAATGGGGACGGGGACTGTAAGAGGG GGGAGCCAAGGACCAAGGACAACCATCTGATCAGGTTTCTCCAAGGACGT TGGACGCCAGTCTCTTCTGGGTCTAGGCTAAGTGAGCGGCTTATTATAAT TATTTAAAACAATTTTAATAAAAATTATATTTGGCCTATTTGTTATGAAG TTGAATTAAGCTTGAAGTTTTAAATTAGAGTTGGCAAGCGTTTTAATTTA ACATTATAAATAACACTGCTACCAAATAAATGTTTACGCAACCAATGAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10924-RA | 3529 | CG10924-RA | 74..3525 | 1..3452 | 17215 | 99.9 | Plus |
CG10924-RB | 3153 | CG10924-RB | 66..3149 | 369..3452 | 15375 | 99.9 | Plus |
CG10924.c | 3156 | CG10924.c | 69..3152 | 369..3452 | 15375 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14419782..14422861 | 369..3447 | 14960 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 14425012..14426052 | 1009..2049 | 1905 | 78.9 | Plus |
chr2R | 21145070 | chr2R | 14414543..14414911 | 1..369 | 1845 | 100 | Plus |
chr2R | 21145070 | chr2R | 14424777..14424912 | 771..906 | 305 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18532671..18535754 | 369..3452 | 15375 | 99.9 | Plus |
2R | 25286936 | 2R | 18537900..18538940 | 1009..2049 | 1920 | 79 | Plus |
2R | 25286936 | 2R | 18527432..18527800 | 1..369 | 1845 | 100 | Plus |
2R | 25286936 | 2R | 18537665..18537800 | 771..906 | 320 | 82.4 | Plus |
2R | 25286936 | 2R | 18537481..18537533 | 587..639 | 190 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18533870..18536953 | 369..3452 | 15375 | 99.9 | Plus |
2R | 25260384 | 2R | 18528631..18528999 | 1..369 | 1845 | 100 | Plus |
2R | 25260384 | 2R | 18539626..18540139 | 1536..2049 | 1055 | 80.3 | Plus |
2R | 25260384 | 2R | 18539099..18539371 | 1009..1281 | 675 | 83.1 | Plus |
2R | 25260384 | 2R | 18538864..18538999 | 771..906 | 320 | 82.3 | Plus |
2R | 25260384 | 2R | 18539384..18539522 | 1294..1432 | 305 | 81.2 | Plus |
2R | 25260384 | 2R | 18538680..18538732 | 587..639 | 190 | 90.5 | Plus |
2R | 25260384 | 2R | 18539545..18539601 | 1455..1511 | 165 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 708..764 | 3279..3332 | 125 | 71.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14414543..14414911 | 1..369 | 100 | -> | Plus |
chr2R | 14419783..14422861 | 370..3447 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..1917 | 335..2251 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..1917 | 335..2251 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..1917 | 335..2251 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..1917 | 335..2251 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..1917 | 335..2251 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..3447 | 1..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..3447 | 1..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 3..3449 | 1..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 1..3447 | 1..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10924-RA | 3..3449 | 1..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18527432..18527800 | 1..369 | 100 | -> | Plus |
2R | 18532672..18535749 | 370..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18527432..18527800 | 1..369 | 100 | -> | Plus |
2R | 18532672..18535749 | 370..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18527432..18527800 | 1..369 | 100 | -> | Plus |
2R | 18532672..18535749 | 370..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14414937..14415305 | 1..369 | 100 | -> | Plus |
arm_2R | 14420177..14423254 | 370..3447 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18528631..18528999 | 1..369 | 100 | -> | Plus |
2R | 18533871..18536948 | 370..3447 | 99 | Plus |
Translation from 334 to 2250
> RE12569.hyp MLLKGAQLLRCGLVSPHRNSNFRLTCRFLSIQYGDAKILTPAVKQYVEKC VELCQPERVHICDGTEVESKLLQGIMLKKGTIIPLPKYENCWLARTNPAD VARVEGKTFISTDSKEQTVPVTEKATPGMLGNWIAEKDMQAAIKERFPGC MKGRTMYVIPFSMGPVGSPLSKIGIEITDSPYVVESMKIMTRAGNPVLNY LQSGDGQFVKCLHSVGTPKSGVQAMPSWPCDPERTIVLHKPAENEIVSYG SGYGGNSLLGKKCLALRIGSTIAKREGWLAEHMLILGITNPQGKKIYIAA AFPSACGKTNLAMMTPTLPGYKVECVGDDIAWMKFDNKGVLRAINPENGF FGVAPGTSRATNPIAMDTIFRNSVFTNVASTSDGGVYWEGMEKDQLKGVT VTDWLGKLWSQESGKPAAHPNSRFCTPASQCPIIDPAWEDSEGVPISAIL FGGRRPSGVPLVYEARDWKHGVFIGAAMRSEATAAAEFKGKVIMHDPFAM RPFFGYNFGDYLGHWLSMEQRGQVPKIFHVNWFRKSSEGKFLWPGFGENS RVLDWIFRRVEGEQCFEDSPIGRLPSKNSLNLDSLENIDLDQLFDLPKDF WEQEVAAIERYFEEQVGHHLPGAVAEELRELKARVADM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10924-PA | 638 | CG10924-PA | 1..638 | 1..638 | 3416 | 100 | Plus |
CG10924-PB | 563 | CG10924-PB | 1..563 | 76..638 | 3022 | 100 | Plus |
Pepck-PA | 647 | CG17725-PA | 16..647 | 11..638 | 2447 | 70 | Plus |
Translation from 334 to 2250
> RE12569.pep MLLKGAQLLRCGLVSPHRNSNFRLTCRFLSIQYGDAKILTPAVKQYVEKC VELCQPERVHICDGTEVESKLLQGIMLKKGTIIPLPKYENCWLARTNPAD VARVEGKTFISTDSKEQTVPVTEKATPGMLGNWIAEKDMQAAIKERFPGC MKGRTMYVIPFSMGPVGSPLSKIGIEITDSPYVVESMKIMTRAGNPVLNY LQSGDGQFVKCLHSVGTPKSGVQAMPSWPCDPERTIVLHKPAENEIVSYG SGYGGNSLLGKKCLALRIGSTIAKREGWLAEHMLILGITNPQGKKIYIAA AFPSACGKTNLAMMTPTLPGYKVECVGDDIAWMKFDNKGVLRAINPENGF FGVAPGTSRATNPIAMDTIFRNSVFTNVASTSDGGVYWEGMEKDQLKGVT VTDWLGKLWSQESGKPAAHPNSRFCTPASQCPIIDPAWEDSEGVPISAIL FGGRRPSGVPLVYEARDWKHGVFIGAAMRSEATAAAEFKGKVIMHDPFAM RPFFGYNFGDYLGHWLSMEQRGQVPKIFHVNWFRKSSEGKFLWPGFGENS RVLDWIFRRVEGEQCFEDSPIGRLPSKNSLNLDSLENIDLDQLFDLPKDF WEQEVAAIERYFEEQVGHHLPGAVAEELRELKARVADM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11970-PA | 639 | GF11970-PA | 1..639 | 1..638 | 2883 | 81.5 | Plus |
Dana\GF11971-PA | 647 | GF11971-PA | 16..647 | 11..638 | 2499 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21903-PA | 639 | GG21903-PA | 1..639 | 1..638 | 3313 | 96.2 | Plus |
Dere\GG21904-PA | 647 | GG21904-PA | 16..647 | 11..638 | 2461 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22961-PA | 639 | GH22961-PA | 1..639 | 1..638 | 2953 | 84.4 | Plus |
Dgri\GH22963-PA | 647 | GH22963-PA | 16..647 | 11..638 | 2475 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pepck2-PA | 638 | CG10924-PA | 1..638 | 1..638 | 3416 | 100 | Plus |
Pepck2-PB | 563 | CG10924-PB | 1..563 | 76..638 | 3022 | 100 | Plus |
Pepck1-PA | 647 | CG17725-PA | 16..647 | 11..638 | 2447 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18449-PA | 639 | GI18449-PA | 1..639 | 1..638 | 2965 | 84.8 | Plus |
Dmoj\GI18450-PA | 647 | GI18450-PA | 36..647 | 27..638 | 2435 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17082-PA | 639 | GL17082-PA | 1..639 | 1..638 | 3037 | 87 | Plus |
Dper\GL17083-PA | 498 | GL17083-PA | 87..498 | 230..638 | 1632 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10647-PA | 639 | GA10647-PA | 1..639 | 1..638 | 3039 | 87.2 | Plus |
Dpse\GA14628-PA | 647 | GA14628-PA | 16..647 | 11..638 | 2480 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21894-PA | 639 | GM21894-PA | 1..639 | 1..638 | 3357 | 97.5 | Plus |
Dsec\GM21895-PA | 647 | GM21895-PA | 16..647 | 11..638 | 2468 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11391-PA | 639 | GD11391-PA | 1..639 | 1..638 | 3368 | 98.3 | Plus |
Dsim\GD11392-PA | 647 | GD11392-PA | 16..647 | 11..638 | 2478 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21534-PA | 639 | GJ21534-PA | 1..639 | 1..638 | 2979 | 85.6 | Plus |
Dvir\GJ21535-PA | 647 | GJ21535-PA | 16..647 | 11..638 | 2486 | 71.7 | Plus |