BDGP Sequence Production Resources |
Search the DGRC for RE13370
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 133 |
Well: | 70 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11370-RA |
Protein status: | RE13370.pep: gold |
Preliminary Size: | 1173 |
Sequenced Size: | 1337 |
Gene | Date | Evidence |
---|---|---|
CG11370 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11370 | 2002-04-22 | Blastp of sequenced clone |
CG11370 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11370 | 2008-04-29 | Release 5.5 accounting |
CG11370 | 2008-08-15 | Release 5.9 accounting |
CG11370 | 2008-12-18 | 5.12 accounting |
1337 bp (1337 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113407
> RE13370.complete ATCATTTCTTTGGTGGAAACTTCAGTGACAAGTTTAGCTCCTGCTGTGAT CAGTGCGCCATTTCGTATCCCACAATCGAGACCCTCGCCCCCGCTATAAG GATTTAAATCACTAGTTCTGCCCCCTCCAAAACTAAGTTCAGTCCGACAT GAAGTTCTGTGCTGCCGTGGCTCTGCTACTGATCGCCGGCATTGTGGCCA GCGGCGATGCCCTGCCCGCCAGGAAAAGAATGGTCTACCTCCAGCAGCCC GCAGCAGCAGAGTGGTACGGATCCGCACCCCATCAGCGCTTCATGTATAT GCAGTATGTCCAGCCCGGCCGCACCCACGCCCGTTCCACCCAGGCAGCCA GTGCCCTCGTGGCCGGAGAGACCGTAGCCACCGGAACCTACCTGAAGGAT TGCAATCACGCAGAGTCTGATACTAGCGCCGAGGGAGTCCCAGCTGACGA TGTCCTCGCAGCCGCCGGAGCCCACGGCGCAACCTCCGTGGCCGAGGCTT ATCCCGACCAAGCGCCAGTTGTACAGGTGGCCACCAATTCCGACGTAGCA CCCCAAGCCGAGTCAGAGGCTGAACCCGAGCCCGAGGCCGCAGACGACGC CGCTAAGGTTCCACGAGACTTCAACTTCGCCGCCGAGGAAGCCTCCGTCG GCTCTGCTGCTGAGGAGGAATCAGTTCCCCTGCCCGTTGCCGAGGCCGAG CTTCCAGCCCCCGCTCCCATTGCTCCAGTGGCCGCCGTGGTGCCAGCGAA CCGCTACCTGCCCGCCAAGAAGAAGGTGATCGTCGAGCTGGATCAGGAGG AGGAGGAGCCCCAGGCCGCCGCCATTGAAGACGAGGAGGAAGTAGAGAAC GCTGTGGCCGACGACGTTGAGGAGGACGAGGAGGAGCTGTCCGTGCCCGT AAAACCCATTAACCCTGTGCGCGTGCCCAACGCCCGTCGTCCCGCAGACA AGAAGCCTGTGAAGGCTGCTTCTCCTGCCGGCAAGCCCTCCAAGAAGCCC GCCGCCCCTCTGCCCGCTGGCACCTTTTTCCCAATCGATTTCGGAGGCAC CAACGGCGGCGCCATTGCCATTGCCAACTCTTTCAGCACCGGCGAGGGCG GATCTGCTACCAGCCACGCCATCGCATACGGCTCTCCGGAGTCCGCCGTC CGCCGAGCCCGCCCCAATCCCAGCAAGTTCCGCCACTAATCCTTGAACCA CACCTTGATGGCGCCAGCAACTGCGAGGGCACCCGAATCAAATCAGTCTA AAACGATTCTCCTGTAATTATTAGCAAATTTGTCAATCTTTGAGCGCAAT AAAATAAAGTTTTATGTTTTTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11370.c | 1705 | CG11370.c | 58..1381 | 1..1324 | 6605 | 99.9 | Plus |
CG11370-RA | 1499 | CG11370-RA | 58..1381 | 1..1324 | 6605 | 99.9 | Plus |
CG11370.b | 1690 | CG11370.b | 455..1366 | 413..1324 | 4560 | 100 | Plus |
CG11370.b | 1690 | CG11370.b | 58..456 | 1..399 | 1980 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 22701640..22702563 | 398..1321 | 4620 | 100 | Plus |
chr3L | 24539361 | chr3L | 22701060..22701287 | 1..228 | 1125 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 22701405..22701575 | 228..398 | 855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 22712737..22713663 | 398..1324 | 4635 | 100 | Plus |
3L | 28110227 | 3L | 22712157..22712384 | 1..228 | 1125 | 99.6 | Plus |
3L | 28110227 | 3L | 22712502..22712672 | 228..398 | 855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 22705837..22706763 | 398..1324 | 4635 | 100 | Plus |
3L | 28103327 | 3L | 22705257..22705484 | 1..228 | 1125 | 99.5 | Plus |
3L | 28103327 | 3L | 22705602..22705772 | 228..398 | 855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 22701060..22701286 | 1..227 | 99 | -> | Plus |
chr3L | 22701405..22701575 | 228..398 | 100 | -> | Plus |
chr3L | 22701641..22702563 | 399..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1041 | 149..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1041 | 149..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1041 | 149..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1041 | 149..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1041 | 149..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1321 | 1..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1321 | 1..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 3..1323 | 1..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 1..1321 | 1..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11370-RA | 3..1323 | 1..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22712157..22712383 | 1..227 | 99 | -> | Plus |
3L | 22712502..22712672 | 228..398 | 100 | -> | Plus |
3L | 22712738..22713660 | 399..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22712157..22712383 | 1..227 | 99 | -> | Plus |
3L | 22712502..22712672 | 228..398 | 100 | -> | Plus |
3L | 22712738..22713660 | 399..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22712157..22712383 | 1..227 | 99 | -> | Plus |
3L | 22712502..22712672 | 228..398 | 100 | -> | Plus |
3L | 22712738..22713660 | 399..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 22705257..22705483 | 1..227 | 99 | -> | Plus |
arm_3L | 22705602..22705772 | 228..398 | 100 | -> | Plus |
arm_3L | 22705838..22706760 | 399..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22705257..22705483 | 1..227 | 99 | -> | Plus |
3L | 22705602..22705772 | 228..398 | 100 | -> | Plus |
3L | 22705838..22706760 | 399..1321 | 100 | Plus |
Translation from 148 to 1188
> RE13370.pep MKFCAAVALLLIAGIVASGDALPARKRMVYLQQPAAAEWYGSAPHQRFMY MQYVQPGRTHARSTQAASALVAGETVATGTYLKDCNHAESDTSAEGVPAD DVLAAAGAHGATSVAEAYPDQAPVVQVATNSDVAPQAESEAEPEPEAADD AAKVPRDFNFAAEEASVGSAAEEESVPLPVAEAELPAPAPIAPVAAVVPA NRYLPAKKKVIVELDQEEEEPQAAAIEDEEEVENAVADDVEEDEEELSVP VKPINPVRVPNARRPADKKPVKAASPAGKPSKKPAAPLPAGTFFPIDFGG TNGGAIAIANSFSTGEGGSATSHAIAYGSPESAVRRARPNPSKFRH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10992-PA | 357 | GF10992-PA | 1..357 | 1..346 | 1340 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16271-PA | 348 | GG16271-PA | 1..348 | 1..346 | 1439 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16710-PA | 362 | GH16710-PA | 1..362 | 1..346 | 1019 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11370-PA | 346 | CG11370-PA | 1..346 | 1..346 | 1756 | 100 | Plus |
CG11370-PB | 341 | CG11370-PB | 1..341 | 1..346 | 1707 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11397-PA | 376 | GI11397-PA | 1..376 | 1..346 | 1012 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18101-PA | 345 | GL18101-PA | 1..345 | 1..346 | 987 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10952-PA | 345 | GA10952-PA | 1..345 | 1..346 | 989 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22465-PA | 340 | GM22465-PA | 1..340 | 1..346 | 1671 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15047-PA | 264 | GD15047-PA | 1..264 | 1..270 | 948 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11658-PA | 341 | GJ11658-PA | 1..341 | 1..346 | 1085 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16771-PA | 356 | GK16771-PA | 1..356 | 1..346 | 1160 | 73.4 | Plus |
Translation from 148 to 1188
> RE13370.hyp MKFCAAVALLLIAGIVASGDALPARKRMVYLQQPAAAEWYGSAPHQRFMY MQYVQPGRTHARSTQAASALVAGETVATGTYLKDCNHAESDTSAEGVPAD DVLAAAGAHGATSVAEAYPDQAPVVQVATNSDVAPQAESEAEPEPEAADD AAKVPRDFNFAAEEASVGSAAEEESVPLPVAEAELPAPAPIAPVAAVVPA NRYLPAKKKVIVELDQEEEEPQAAAIEDEEEVENAVADDVEEDEEELSVP VKPINPVRVPNARRPADKKPVKAASPAGKPSKKPAAPLPAGTFFPIDFGG TNGGAIAIANSFSTGEGGSATSHAIAYGSPESAVRRARPNPSKFRH*