BDGP Sequence Production Resources |
Search the DGRC for RE13669
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 136 |
Well: | 69 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13983-RA |
Protein status: | RE13669.pep: gold |
Preliminary Size: | 762 |
Sequenced Size: | 890 |
Gene | Date | Evidence |
---|---|---|
CG13983 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13983 | 2002-03-20 | Blastp of sequenced clone |
CG13983 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13983 | 2008-04-29 | Release 5.5 accounting |
CG13983 | 2008-08-15 | Release 5.9 accounting |
CG13983 | 2008-12-18 | 5.12 accounting |
890 bp (890 high quality bases) assembled on 2002-03-20
GenBank Submission: AY094855
> RE13669.complete ACAGTCATCTCCAGCAGCTATCGATTGACATACCATGAGAACCCTGAGCG TCTTGATTCTCCTCGCCACTCTGGTTGCCTTTTGTGCAGCCCAGCAGGCC TCCAACGGCAAGAACAGAAAGGAAAATGCCTTCTCCAAGATCGTTCCTCG CCTGCTGTGGAACATCAAGCGCGGCGACCAGGAGAGCCACCGCAACTCCC AGCAGCCCATCATCATAGTGCAGCAGCCCAGCTCGAATCAGGAATCGGAT AGACACCACCACCACAACCCCAACTATCCCTACTACCCGTACTACCCACC ACCACCACCTCAAAACCGTCCTCCGCCACCGTTTCCCGGCATGGACTGGA ACACTGTGGGAGGAGGCCCCACCTACCTGATCATCAACCCCAACAACATG CAGGGCATCTACCTGCCCGCCAGCTCTAACAGCTCCAACTCCACTAGCTC ACGGCGCAGCGCCTTCGTGCCCACCATTTCCGATTTGCTGCAGGGCCTCA ACCTGGACGACCTGGCCGATGGAAGTCTCTTCGAGGATGATTCCGAGGTG GTCAACGCGGCCGAGGATGGAAATGCGGAGATTCCCCTGGCCGATGGACC AATCAGCCAGGCTGACGATGATCGCGAGGAGGACGTGATCAGCGAGGACG AGATCGATGCCATGGATCGCCAGAGCAACAGGGGATTGAGTCCCAAGCAT CTGGTCTCCATACTGATGCAGGACAAGCGACGTCGCCGCATCCAGGAGGT TCTCGCTGGCATCTATCTGAGGAACTACAATCTGAACAGAAAGTAATCGA ACGGATACGAGCAGATACAAATTGAAATTGTGCGAGGCTGAATAAATAGC GGGCACCTTGCCCAAAAACACCCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13983-RA | 1078 | CG13983-RA | 102..980 | 1..879 | 4380 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6262607..6263171 | 310..874 | 100 | == | Minus |
chr2L | 6263228..6263352 | 129..253 | 100 | <- | Minus |
chr2L | 6263410..6263537 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..762 | 35..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..762 | 35..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..762 | 35..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..762 | 35..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..762 | 35..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..874 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..874 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 4..877 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 1..874 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13983-RA | 4..877 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6263557..6264302 | 129..874 | 100 | <- | Minus |
2L | 6264360..6264487 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6263557..6264302 | 129..874 | 100 | <- | Minus |
2L | 6264360..6264487 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6263557..6264302 | 129..874 | 100 | <- | Minus |
2L | 6264360..6264487 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6263557..6264302 | 129..874 | 100 | <- | Minus |
arm_2L | 6264360..6264487 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6263557..6264302 | 129..874 | 100 | <- | Minus |
2L | 6264360..6264487 | 1..128 | 100 | Minus |
Translation from 34 to 795
> RE13669.pep MRTLSVLILLATLVAFCAAQQASNGKNRKENAFSKIVPRLLWNIKRGDQE SHRNSQQPIIIVQQPSSNQESDRHHHHNPNYPYYPYYPPPPPQNRPPPPF PGMDWNTVGGGPTYLIINPNNMQGIYLPASSNSSNSTSSRRSAFVPTISD LLQGLNLDDLADGSLFEDDSEVVNAAEDGNAEIPLADGPISQADDDREED VISEDEIDAMDRQSNRGLSPKHLVSILMQDKRRRRIQEVLAGIYLRNYNL NRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15398-PA | 262 | GF15398-PA | 5..262 | 1..253 | 734 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23634-PA | 253 | GG23634-PA | 1..253 | 1..253 | 935 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10998-PA | 263 | GH10998-PA | 5..263 | 3..253 | 267 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13983-PA | 253 | CG13983-PA | 1..253 | 1..253 | 1332 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17515-PA | 254 | GI17515-PA | 9..254 | 7..253 | 240 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26280-PA | 263 | GL26280-PA | 1..263 | 1..253 | 636 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12674-PA | 263 | GA12674-PA | 1..263 | 1..253 | 626 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17952-PA | 253 | GM17952-PA | 1..253 | 1..253 | 1301 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22591-PA | 253 | GD22591-PA | 1..253 | 1..253 | 997 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15290-PA | 250 | GJ15290-PA | 5..250 | 3..253 | 308 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15372-PA | 247 | GK15372-PA | 5..247 | 4..253 | 510 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18455-PA | 254 | GE18455-PA | 1..254 | 1..253 | 1042 | 92.1 | Plus |
Translation from 34 to 795
> RE13669.hyp MRTLSVLILLATLVAFCAAQQASNGKNRKENAFSKIVPRLLWNIKRGDQE SHRNSQQPIIIVQQPSSNQESDRHHHHNPNYPYYPYYPPPPPQNRPPPPF PGMDWNTVGGGPTYLIINPNNMQGIYLPASSNSSNSTSSRRSAFVPTISD LLQGLNLDDLADGSLFEDDSEVVNAAEDGNAEIPLADGPISQADDDREED VISEDEIDAMDRQSNRGLSPKHLVSILMQDKRRRRIQEVLAGIYLRNYNL NRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13983-PA | 253 | CG13983-PA | 1..253 | 1..253 | 1332 | 100 | Plus |