BDGP Sequence Production Resources |
Search the DGRC for RE13814
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 138 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9849-RA |
Protein status: | RE13814.pep: gold |
Sequenced Size: | 932 |
Gene | Date | Evidence |
---|---|---|
CG9849 | 2001-12-14 | Blastp of sequenced clone |
CG9849 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9849 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9849 | 2008-04-29 | Release 5.5 accounting |
CG9849 | 2008-08-15 | Release 5.9 accounting |
CG9849 | 2008-12-18 | 5.12 accounting |
932 bp (932 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071051
> RE13814.complete GTCGGTTCATCCCTAACGCCATAAGAATTAGTTTGTTTTTTTTTTGCAAC AAACATTTATATTAGTTATGCGTGCGTGGCCAAAATGCTAATCGCCTGGT TAGTGCTTGCCGCCACTTTGAGCCGATCCATCAGAGCCAGCACCACGATA TCGATACCGATCACAACGCAGGACATAATAGCGGGTGACGTGTTTTTTGA AATCCTGTCCCCCTCGGAACTGGAATACACGTACCGGCTGCGCCCGGCCA AGGACTTTGGATCCGCCTTCTCGGAGCGACTGGAGGGTGTGCCGCTAGTG ATTACAGATCCCCCCGGCGCCTGCCAGGAGATCCGGAACGCCAGAGATCT GAATGGGGGCGTCGCACTCATTGATCGAGGGGAGTGTTCCTTCCTCACGA AGACACTTCGAGCGGAGGCAGCTGGCGCATTGGCTGCAATCATCACTGAG TACAATCCCAGCTCTCCAGAGTTTGAGCACTACATCGAGATGATACATGA CAACTCCCAACAGGACGCCAACATACCGGCCGGCTTTCTTCTCGGGAAGA ATGGCGTCATCATCCGGTCGACGCTGCAGCGGCTGAAGAGGGTGCACGCC CTGATCAACATACCGGTCAACCTCACCTTTACCCCGCCATCTAAGATTAA TCATCCGCCGTGGCTGGGCTGGTGACGTGATCGGATTACATGCAGCTCAA AGGACTCGTGTGAAAGAGACACACACGATCTGAAACCAAAGTGCATACTC GTAGGCTGAGACGTCGAGACCGCAACTGAGACTATACTTTAGAGTACCAA TAAGTAGCTAATTCGTAGACGGCAGCCATAAACTGTAAATAAATAGCTTA GCAGCCAAAGAGTCAGGTCGCCAAGTTGTAATCTAGACAATACTATAATT CTTAATTTTTATAGACAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18825000..18825535 | 381..916 | 99 | Plus | |
chr2R | 18824291..18824669 | 1..380 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 1..591 | 85..675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RB | 1..591 | 85..675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 1..591 | 85..675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 1..591 | 85..675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 1..591 | 85..675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 72..986 | 1..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RB | 46..960 | 1..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 72..986 | 1..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 72..986 | 1..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9849-RA | 72..986 | 1..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22937781..22938159 | 1..380 | 99 | -> | Plus |
2R | 22938490..22939025 | 381..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22937781..22938159 | 1..380 | 99 | -> | Plus |
2R | 22938490..22939025 | 381..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22937781..22938159 | 1..380 | 99 | -> | Plus |
2R | 22938490..22939025 | 381..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18825304..18825682 | 1..380 | 99 | -> | Plus |
arm_2R | 18826013..18826548 | 381..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22938998..22939376 | 1..380 | 99 | -> | Plus |
2R | 22939707..22940242 | 381..916 | 100 | Plus |
Translation from 2 to 674
> RE13814.hyp RFIPNAIRISLFFFATNIYISYACVAKMLIAWLVLAATLSRSIRASTTIS IPITTQDIIAGDVFFEILSPSELEYTYRLRPAKDFGSAFSERLEGVPLVI TDPPGACQEIRNARDLNGGVALIDRGECSFLTKTLRAEAAGALAAIITEY NPSSPEFEHYIEMIHDNSQQDANIPAGFLLGKNGVIIRSTLQRLKRVHAL INIPVNLTFTPPSKINHPPWLGW*
Translation from 84 to 674
> RE13814.pep MLIAWLVLAATLSRSIRASTTISIPITTQDIIAGDVFFEILSPSELEYTY RLRPAKDFGSAFSERLEGVPLVITDPPGACQEIRNARDLNGGVALIDRGE CSFLTKTLRAEAAGALAAIITEYNPSSPEFEHYIEMIHDNSQQDANIPAG FLLGKNGVIIRSTLQRLKRVHALINIPVNLTFTPPSKINHPPWLGW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13558-PA | 196 | GF13558-PA | 1..196 | 1..196 | 937 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22818-PA | 196 | GG22818-PA | 1..196 | 1..196 | 1020 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20969-PA | 204 | GH20969-PA | 1..204 | 1..196 | 742 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9849-PB | 196 | CG9849-PB | 1..196 | 1..196 | 1008 | 100 | Plus |
CG9849-PA | 196 | CG9849-PA | 1..196 | 1..196 | 1008 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21306-PA | 194 | GI21306-PA | 5..194 | 6..196 | 717 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16268-PA | 197 | GL16268-PA | 1..197 | 1..196 | 847 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22071-PA | 197 | GA22071-PA | 1..197 | 1..196 | 896 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15975-PA | 196 | GM15975-PA | 1..196 | 1..196 | 1022 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11727-PA | 196 | GD11727-PA | 1..196 | 1..196 | 1017 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21572-PA | 194 | GJ21572-PA | 1..194 | 1..196 | 826 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19546-PA | 202 | GK19546-PA | 2..202 | 1..196 | 835 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14252-PA | 196 | GE14252-PA | 1..196 | 1..196 | 1007 | 96.9 | Plus |